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Gluconeogenesis
Gluconeogenesis 
Synthesis of "new glucose" from common metabolites 
•Humans use ~160 g of glucose per day 
•75% is used by the brain 
•Body fluids contain only 20 g of glucose 
•Glycogen stores yield 180-200 g of glucose 
•So the body must be able to make its own glucose 
• 90% of gluconeogenesis occurs in the liver and kidneys
Why is gluconeogenesis not just 
the reverse of glycolysis? 
• The reverse of glycolysis is 
• 2 Pyruvate + 2ATP + 2 NADH + 2H+ + 2H2O  
glucose +2ADP +2Pi + 2 NAD + (DG = +74 kJ/mol) 
• This is thermodynamically unfavorable, so energetically unfavorable 
steps in the reverse glyolysis reaction are replaced and energy is 
added in the form of GTP and ATP to give: 
• The actual equation for gluconeogenesis 
• 2Pyruvate + 4ATP +2GTP+ 2NADH + 2H+ + 6H2O  
glucose +4ADP +2GDP +6Pi + 2 NAD + (DG = -38 kJ/mol) 
• Notice the extra ATPs and GTPs drive the 
process
Glycolysis <-> gluconeogenesis 
Gluconeogenesis is not the reversal of glycolysis !!! 
Glycolysis: in the cytosol 
Gluconeogenesis: major part in cytosol 
-> 1st step in mitochondria -> shuttle 
Biotin: prosthetic 
group -> carrier 
for CO2 
Reverse reaction of glycolysis thermodynamically 
not favorable !!! 
4
Glycolysis vs Gluconeogenesis 
• Glycolosis 
• Glucose (6C) to 2 pyruvates 
(3C) 
• Creates energy 2ATP 
• Reduces 2 NAD+ to 2 NADH 
• Active when energy in cell low 
• 10 steps from glucose to 
pyruvate 
• Pyruvate to AcCoA before 
Krebs 
• Gluconeogenesis 
• 2 pyruvates (3C) to Glucose 
(6C) 
• Consumes energy 
4ATP+2GTP 
• Oxidizes 2NADH to 2 NAD+ 
• Active when energy in cell high 
• 11 steps from pyruvate to 
glucose 
• AcCoA isn’t used in 
gluconeogenesis 
Gluconeogenesis uses 7 of the 10 enzymatic reactions 
of glycolysis but in the reverse direction. The 3 not used 
are the ones requiring ATP in glycolysis.
Synthesis of glucose from non-carbohydrate 
precursors: 
-> gluconeogenesis 
• Brain and blood cells depend on glucose -> 
160g/day (mainly for the brain) 
• Glucose in the blood: 20g 
• Starvation > 1day  other metabolites 
for energy! 
-> Gluconeogenesis pathway: 
• Takes place in liver (and kidneys) 
• Important to maintain blood glucose level 
• Major precursors: glycerol, amino acids, 
lactic acid 
• Specific enzymes in addition to glycolysis 
(for the irreversible steps in glycosis) 
7
Synthesis of glucose from non-carbohydrate precursors: 
-> gluconeogenesis 
Pyruvate (end product of glycolysis) -> under aerobic conditions -> shuttle into Mitochondria 
-> converted into acetyl-CoA -> citric acid cycle 
Gluconeogenesis -> start with 
pyruvate in mitochondria 
1st Step: convertion to 
oxaloacetate 
-> malate/oxaloacetate shuttle 
glycolysis 
8
Synthesis of glucose from non-carbohydrate precursors: 
-> gluconeogenesis 
Triacylglycerols (Lipids) taken up by diet 
-> brocken down to fatty acids and glycerol 
cannot be converted to glucose 
glucose 
9
Substrates for gluconeogenesis: 
Pyruvate 
Lactate 
Glycerol 
TCA cycle intermediates 
Most amino acids 
Not substrates for gluconeogenesis: 
Acetyl-CoA 
Fatty acids 
Lysine 
Leucine
Regulatory enzymes of gluconeogenesis 
• Pyruvate carboxylase 
• PEP carboxykinase (PEPCK) 
• Fructose-1,6-bisphosphatase 
• Glucose-6-phosphatase
First Reaction of Gluconeogenesis 
- recall that pyruvate is the final product of glycolysis. 
The pyruvate carboxylase reaction.
Oxaloacetate is the starting 
material for gluconeogenesis
Regulation of Gluconeogenesis 
Glucose-6-phosphatase is subject to substrate level 
control. 
- at higher G6P concentrations reaction rate increases 
- recall, this happens in the liver. Other tissues do not 
hydrolyze their G6P, thereby trapping it in the cells. 
Glycolysis and gluconeogenesis are reciprocally regulated. 
- regulatory molecules that inhibit gluconeogenesis often 
activate glycolysis, and vise versa.
Pyruvate is converted to oxaloacetate before being 
changed to Phosphoenolpyruvate 
1. Pyruvate carboxylase catalyses the ATP-driven 
formation of oxaloacetate from pyruvate and CO2 
2. PEP carboxykinase (PEPCK) concerts oxaloacetate 
to PEP that uses GTP as a phosphorylating agent.
Pyruvate carboxylase requires biotin as a cofactor 
Biotin is an essential cofactor in 
most carboxylation reactions. 
It is an essential vitamin in the 
human diet, but deficiencies are 
rare.
Biotin is an essential nutrient 
There is hardly any deficiencies for biotin because it 
is abundant and bacteria in the large intestine also 
make it. 
However, deficiencies have been seen and are nearly 
always linked to the consumption of raw eggs. 
Raw eggs contain Avidin, a protein that binds biotin 
with a Kd = 10-15 (that is one tight binding reaction!) 
It is thought that Avidin protects eggs from bacterial 
invasion by binding bioitin and killing bacteria.
Acetyl-CoA regulates pyruvate 
carboxylase 
Increases in oxaloacetate concentrations increase 
the activity of the Krebs cycle and acetyl-CoA is a 
allosteric activator of the carboxylase. 
However when ATP and NADH concentrations are 
high and the Krebs cycle is inhibited, oxaloacetate 
goes to glucose.
Pyruvate is converted to oxaloacetate 
in the mitochondria 
Oxaloacetate cannot be transported 
directly across the mitochondrial 
membrane so it is converted to 
malate, then transported, then 
oxidized back to oxaloacetate.
Transport between the 
mitochondria and the cytosol 
Generation of oxaloacetate occurs in the mitochondria only, 
but, gluconeogenesis occurs in the cytosol. 
Oxaloacetate are produced through pyruvate carboxylase, 
requires exiting the mitochondrion. Moreover, the inner 
mitochondrial membrane is not permeable to this compound. 
Therefore, oxaloacetate is converted to malate inside the 
mitochondrion through mitochondrial malate dehydrogenase, 
the malate is transported by the mitochondrial membrane 
through a special transport protein and then the malate is 
converted back to oxaloacetate in the cytoplasm through a 
cytosolic malate dehydrogenase.
The PEP carboxykinase reaction.
Nucleotide diphosphate kinases 
– Both glycolysis and Oxidative phosphorylation 
produce ATP with its high energy phoshoanhydride 
bonds: How does GTP get made from GDP? 
– Directly from a single step in the Krebs cycle AND 
from the following reaction 
– GDP + ATP → GTP + ADP 
– This is carried out in the cell by an enzyme called 
– Nucleotide diphosphate kinase which carries out the 
general reaction 
– NDP + ATP → NTP + ADP (where N is T, G, or C)
Regulatory enzymes of gluconeogenesis 
• Pyruvate carboxylase 
• PEP carboxykinase (PEPCK) 
• Fructose-1,6-bisphosphatase 
• Glucose-6-phosphatase
Last step of gluconeogenesis 
Free glucose is important control point -> pathway ends mostly with glucose-6-P 
-> finished just if glucose is needed (in blood) 
-> advantage of stopping at glucose-6-P 
-> trapped in the cell (cannot shuttle outside) 
Last step of gluconeogenesis: in ER lumen 
-> glucose shuttled back to cytosol -> 
leaves cell 
26
Regulatory enzymes of gluconeogenesis 
• Pyruvate carboxylase 
• PEP carboxykinase (PEPCK) 
• Fructose-1,6-bisphosphatase 
• Glucose-6-phosphatase
Glucose-6-phosphatase 
-enzyme unique to liver and kidney allowing them to supply glucose 
to other tissues. Found in ER (endoplasmic reticulum). 
Glucose-6-phosphate cannot exit the cell, and so, in the liver, glucose 6- 
phosphate is transported into the endoplasmic reticulum, where it is converted 
into glucose by glucose 6-phosphatase.
Fructose-2,6-bisphosphate 
•A potent allosteric regulatory molecule. 
•- activates phosphofructokinase. 
•- inhibits fructose-1,6-bisphosphatase. 
•- its synthesis and degradation are catalyzed by the same 
bifunctional enzyme.
Fructose-2,6-bisphosphate 
• F2,6BP activates phosphofructokinase 
(PFK1) - the enzyme in glycolysis that 
converts fructose-6-phosphate to fructose- 
1,6-bisphosphate. 
• F2,6BP also inhibits fructose-1,6- 
bisphosphatase (F1,6BPase) - the 
enzyme in gluconeogenesis. 
• F1,6BPase is ten times more sensitive to 
F2,6BP than AMP.
• F2,6BP stimulates glycolysis 
• F2,6BP inhibits gluconeogenesis
Fructose-2,6-bisphosphate activates 
glycolysis and inhibits gluconeogenesis, so 
its level is very important.
• In the liver, the most important coordinating modulator is 
fructose 2,6-bisphophate (F2,6BP) 
• It is formed from F6P by the enzyme phosphofructokinase-2 
(PFK-2) 
• It is broken down by the same enzyme, but at a different 
catalytic site in the enzyme – it’s a bifunctional protein 
-It is called fructose 2,6-bisphosphatase (FBPase-2) for 
this activity 
- Balance of PFK-2 to FBPase-2 activity controlled by 
-Glucagon 
-Insulin
Reciprocal regulation of glycolysis & gluconeogenesis 
• Pathways not active at same 
time 
• Regulated by products of 
reaction and precursors 
(allostery) 
• Regulated by hormones: 
glucagon & insulin, through 
F-2,6-BP 
• Regulated at the 
transcriptional level of genes 
In the liver: aim is to maintain blood glucose level 
glucagon 
insulin 
transcription 
34
Balance between glycolysis and gluconeogenesis in the liver 
-> sensitive to blood glucose concentration 
- 
Regulated by a bifunctional enzyme: PFK2/FBPase2 
-> formed by PFK2 
-> hydrolysed (dephosphorylated) by FBPase2 
Phosphofructokinase 2 Fructose bisphophatase 2 
35
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 
P 
Low glucose 
High glucagon 
Increased 
phosphorylation 
Phosphorylation of the enzyme results in the inactivation of the 
phosphofructokinase-2 activity and activation of the fructose-2,6- 
bisphosphatase activity. This results in a down regulation of 
glycolysis and increased gluconeogenesis.
Balance between glycolysis and gluconeogenesis in the liver 
-> sensitive to blood glucose concentration 
Low blood-glucose level -> 
glucagon-> low level of F-2,6-BP 
High blood-glucose level -> 
insulin-> high level of F-2,6-BP 
37
• Fructose-2,6-bisphosphate, the most potent 
allosteric regulator of the glycolysis and 
gluconeogenesis pathways
F2,6 BP 
ATP 
ADP 
Pi 
F2,6 BP 
PFK-1 
PFK-2 
INHIBITS 
F2,6 BP 
STIMULATES
Regulators of gluconeogenic enzyme activity 
Enzyme Allosteric Allosteric Enzyme Protein 
Inhibitors Activators Phosphorylation Synthesis 
PFK ATP, citrate AMP, F2-6P 
FBPase AMP, F2-6P 
PK Alanine F1-6P Inactivates 
Pyr. Carb. AcetylCoA 
PEPCK Glucogon 
PFK-2 Citrate AMP, F6P, Pi Inactivates 
FBPase-2 F6P Glycerol-3-P Activates
Synthesis of other saccharides through gluconeogenesis 
42
43
Regulation of Gluconeogenesis 
• Fate of pyruvate 
•Go on to citric acid cycle – requires conversion to Acetyl 
Co-A by the pyruvate dehydrogenase complex 
•Gluconeogenesis – first step is conversion to 
oxaloacetate by pyruvate carboxylase 
• Acetyl Co-A accumulation 
• inhibits pyruvate dehydrogenase 
• activates pyruvate carboxylase
Coordinated regulation of PFK-1 and FBPase-1 
(1) Phosphofructokinase-1 (PFK-1) (glycolysis) 
(2) Fructose 1,6-bisphosphatase FBPase-1 (gluconeogenesis) 
• Modulating one enzyme in a substrate cycle will alter the flux 
through the two opposing pathways 
• Two coordinating modulators 
•AMP 
•Fructose 2,6-bisphosphate 
• Inhibiting PFK-1 stimulates gluconeogenesis 
• Inhibiting the phosphatase stimulates glycolysis 
• AMP concentration coordinates regulation 
• stimulates glycolysis 
• Inhibits gluconeogenesis
Pathway Integration during a sprint 
46
Cori Cycle 
• Muscular activity leads to the release of epinephrine by 
the adrenal medulla. 
• During muscle contractions, ATP is constantly being 
used to supply energy and more ATP is produced. 
• At first glycolysis produces pyruvic acid which is then 
converted into acetyl CoA and is metabolized in the citric 
acid cycle to make ATP. 
• If muscular activity continues, the availability of oxygen 
becomes the limiting factor and the cells soon exhaust 
their supplies of oxygen. 
• However, glycolysis continues even under anaerobic 
conditions even though the citric acid cycle works only 
under aerobic conditions.
Cori Cycle (cont.) 
• The final limiting factor in continued muscular 
activity is the build up of lactic acid. The lactic 
acid eventually produces muscular pain which 
force discontinuation of activity. 
• The lactic acid is sent in the blood to the liver 
which can convert it back to pyruvic acid and 
then to glucose through gluconeogenesis. 
• The glucose can enter the blood and be carried 
to muscles 
• If by this time the muscles have ceased activity, 
the glucose can be used to rebuild supplies of 
glycogen through glycogenesis.
Cori Cycle (cont.) 
Liver Cell 
• At this time the oxygen debt can be made up so that the citric cycle 
and electron transport chain also begin to function again. In order 
for most of the lactic acid to be converted to glucose, some must be 
converted to pyruvic acid and then to acetyl CoA
The Cori Cycle
Cori Cycle
Sample questions 
• There are four enzymes of gluconeogenesis that 
circumvent the irreversible steps in glycolysis. When 
starting with the substrate pyruvate or lactate they are 
• A. Hexokinase, phosphofructokinase-1, 
phosphofructokinase-2 and pyruvate kinase 
• B. Pyruvate carboxylase, phosphoenolpyruvate 
carboxykinase, fructose-1,6-bisphosphatase, and 
glucose-6-phosphatase 
• C. Glycerol kinase, glycerol-3-phosphate 
dehydrogenase, fructose-2,6-bisphosphatase, and 
glucose-6-phosphatase 
• D. Amino transferase, phosphoenolpyruvate 
carboxykinase, fructose-2,6-bisphosphatase, and 
glucose-6-phosphatase
Sample questions 
• The enzymes that remove phosphate groups during the 
process of gluconeogenesis and circumvent two of the 
three irreversible reactions of glycolysis are 
• A. Pyruvate kinase and glycerol kinase 
• B. Phosphoenolpyruvate carboxykinase and glycerol 
kinase 
• C. 3-Phosphoglycerate kinase and fructose-1,6- 
bisphosphatase 
• D. Fructose-1,6-bisphosphatase and glucose-6- 
phosphatase
Glycogen Metabolism
Glycogen Metabolism 
• Glycogenolysis is a process by which 
glycogen is broken down into glucose to 
provide immediate energy and to maintain 
blood glucose levels during fasting. 
• Glycogenesis is the formation of glycogen 
from glucose.
• Glycogenolysis occurs primarily in the liver and 
is stimulated by the hormones glucagon and 
epinephrine (adrenaline). 
• When blood glucose levels fall, as during fasting, 
there is an increase in glucagon secretion from 
the pancreas. This increase is accompanied by 
a decrease in insulin secretion. 
• Insulin is aimed at increasing the storage of 
glucose in the form of glycogen
Regulation of Glycogen Metabolism 
• Muscle glycogen is fuel for muscle contraction 
• Liver glycogen is mostly converted to glucose for bloodstream transport 
to other tissues 
• Both mobilization and synthesis of glycogen are regulated by hormones 
• Insulin, glucagon and epinephrine regulate mammalian glycogen 
metabolism (hormones) 
• Ca2+ and [AMP]/[ATP] (muscle glycogen phosphorylase) 
• [glucose] (liver glycogen phosphorylase) 
• [glucose 6-phosphate] (glycogen synthase) 
• Hormones 
•Insulin is produced by b-cells of the pancreas 
-increases glucose transport into muscle, adipose tissue via GLUT 4 transporter 
-stimulates glycogen synthesis in the liver
• Glucagon Secreted by the a cells of the pancreas in response 
to low blood glucose (elevated glucagon is associated with the 
fasted state) 
-Stimulates glycogen degradation to restore blood glucose 
to steady-state levels 
-Only liver cells are rich in glucagon receptors 
• Epinephrine (adrenaline) Released from the adrenal glands 
in response to sudden energy requirement (“fight or flight”) 
- Stimulates the breakdown of glycogen to G1P (which is 
converted to G6P) 
-Increased G6P levels increase both the rate of glycolysis in 
muscle and glucose release to the bloodstream from the liver
Glucagon/Epinephrine control of glycogen synthesis/degradation
Signal cascade initiated by epinephrine
• 1) Epinephrine binds to a receptor on the muscle cell membrane and stimulates adenyl cyclase in the 
membrane. 
• 2) Adenyl cyclase in the membrane catalyzes the formation of cyclic AMP from ATP. 
• 3) The increase of cyclic AMP activates a protein kinase. The binding of cyclic AMP to an enzyme is 
an allosteric control where the enzyme is "switched on" for activity. 
• 4) The protein kinase causes phosphorylations (addition of phosphate) on a series of phosphorylation 
enzymes which activates them to finally produce glucose-1-phosphate. At the same time that 
enzymes are being activated for glycogen breakdown, glycogen synthetase enzyme must be 
inactivated. Glycogenesis must be "switched off" and glycogenolysis "switched on." 
• 5) Glucose-6-phosphate is the final result of the initial stimulation by epinephrine or other hormones 
such as glucagon. If this happened to a muscle cell, then the glycolysis pathway is the next step in 
the sequence. If this happened to a liver cell stimulated by glucagon, then glucose is produced to 
enter the blood stream.
• Epinephrine markedly stimulates glycogen 
breakdown in muscles and, to a lesser 
extent, in the liver. 
• Muscular activity quickly uses stored ATP 
as the energy source and more ATP must 
be generated by the breakdown of 
glycogen.
• At first glycolysis produces pyruvic acid which is then converted into acetyl CoA and is 
metabolized in the citric acid cycle to make ATP. 
• If muscular activity continues, the cells soon exhaust their supplies of oxygen. When this 
happens, the citric acid cycle is inhibited and causes pyruvic acid to accumulate. 
• However, glycolysis continues even under anaerobic conditions even though the citric 
acid cycle works only under aerobic conditions. Glycogenolysis is stimulated to make 
more glucose-6-phosphate. 
• When the cells become anaerobic, glycolysis continues if pyruvic acid is converted to 
lactic acid. 
Liver Cell
Signal cascade
High Blood Glucose: 
Insulin lowers blood glucose levels
Glycogen Storage 
• Glycogen is a D-glucose polymer 
• a(1®4) linkages 
• a(1®6) linked branches every 8-14 
residues
Glycogen storage diseases
Glycogen 
Breakdown 
Glycogen 
Synthesis 
Glucose Glycogen Glucose 
Glycogen Synthesis 
R
Glycogen Breakdown or Glycogenolysis
• Three steps 
– Glycogen phosphorylase 
Glycogen + Pi <-> glycogen + G1P 
(n residues) (n-1 residues) 
– Glycogen debranching 
– Phosphofructomutase 
Glycogen 
Breakdown
Glycogen 
Breakdown 
Glycogen 
Synthesis 
Glucose Glycogen Glucose 
Glycogen 
Breakdown 
R
Glycogen 
Phosphorylase 
Requires 
Pyridoxal-5’-phosphate 
PLP
Glycogen Debranching Enzyme
Phosphofructomutase
Glycogen phosphorylase 
is activated upon 
phosphorylation by 
phosphorylase kinase. 
Phosphorylase kinase is 
activated upon 
phosphorylation by protein 
kinase A (PKA). 
PKA is activated by 
cyclic AMP, which is 
produced by a G-protein in 
response to 
epinephrine/glucagon.
Reciprocal Regulation of Glycogen 
Phosphorylase and Glycogen Synthase 
• Glycogen phosphorylase (GP) and glycogen synthase (GS) control 
glycogen metabolism in liver and muscle cells 
• GP and GS are reciprocally regulated both covalently and allosterically (when 
one is active the other is inactive) 
• Covalent regulation by phosphorylation (-P) and dephosphorylation (-OH) 
COVALENT MODIFICATION (Hormonal control) 
Active form “a” Inactive form “b” 
Glycogen phosphorylase -P -OH 
Glycogen synthase -OH -P 
Allosteric regulation of GP and GS 
GP a (active form) - inhibited by Glucose 
GP (muscle)- stimulated by Ca2+ and high [AMP] 
GS b (inactive form) - activated by Glucose 6-Phosphate
Control of glycogen 
phosphorylase 
phosphorylase b 
(inactive) 
phosphorylase a 
(active) 
phosphorylation 
glycogen 
breakdown
• Hormones initiate enzyme cascades 
•Catalyst activates a catalyst activates a catalyst, etc. 
• When blood glucose is low: epinephrine and glucagon activate 
protein kinase A 
• Glycogenolysis is increased (more blood glucose) 
• Glycogen synthesis is decreased
81 
Regulation of blood 
glucose level in the liver
Glycogen 
Breakdown 
Step 1. 
Glycogen 
Phosphorylase 
Fig 15-12
Glycogen 
Breakdown 
Phospho-glucomutase 
Fig 15-12
Glycogen 
Breakdown 
Debranching 
enzyme
Glycogen Synthesis
UDP-glucose Pyrophorylase
Glycogen Synthase
Sample questions 
• The most important control step in gluconeogenesis is fructose-1,6- 
bisphosphatase. All of the following statements are true EXCEPT 
• A. Fructose-1,6-bisphosphatase converts fructose-2,6-bisphosphate 
to fructose-6-phosphate 
• B. During times when insulin is high, fructose-1,6-bisphosphatase is 
inhibited by fructose-2,6-bisphosphate 
• C. During a fast or exercise when glucagon and/or epinephrine are 
high, fructose-1,6-bisphosphatase is active because of the absence 
of fructose-2,6-bisphosphate 
• D. Glycolysis or gluconeogenesis cannot be active at the same 
time. If they were is would be a futile cycle
Sample questions 
• In the liver, glucagon will activate 
• A. Glycolysis and glycogen synthesis 
• B. Gluconeogenesis and glycogenolysis 
• C. Gluconeogenesis and glycogen synthase 
• D. Gluconeogenesis and glycogen synthesis 
• Which of the following statements about hormonal levels during different 
states is true? 
• A. During the time you are eating a high carbohydrate mixed meal, the 
insulin to glucagon ratio will decrease 
• B. When passing from the fed to fasting state, insulin and glucagon usually 
decrease 
• C. When playing basketball, epinephrine is usually low and insulin is high 
• D. After running for 20 miles, epinephrine and glucagon are high and insulin 
is low
Sample questions 
• All of the following will result in activation of glycogen 
phosphorylase in skeletal muscle EXCEPT 
• A. Increased concentrations of AMP from contraction of 
muscle 
• B. Increased epinephrine and cAMP 
• C. Increased cytosolic [Ca++] 
• D. Increased protein phosphatase 
• E. Increased activity of glycogen phosphorylase kinase
Experiment for next week 
• Separation of Ferrihemoglobin and 
Potassium Ferricyanide by Gel Filtration 
Chromatography 
• Changed to 
Construction of Serum Protein Standard 
Curve using Folin's Phenol Method

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14 Glucogenesis

  • 2. Gluconeogenesis Synthesis of "new glucose" from common metabolites •Humans use ~160 g of glucose per day •75% is used by the brain •Body fluids contain only 20 g of glucose •Glycogen stores yield 180-200 g of glucose •So the body must be able to make its own glucose • 90% of gluconeogenesis occurs in the liver and kidneys
  • 3. Why is gluconeogenesis not just the reverse of glycolysis? • The reverse of glycolysis is • 2 Pyruvate + 2ATP + 2 NADH + 2H+ + 2H2O  glucose +2ADP +2Pi + 2 NAD + (DG = +74 kJ/mol) • This is thermodynamically unfavorable, so energetically unfavorable steps in the reverse glyolysis reaction are replaced and energy is added in the form of GTP and ATP to give: • The actual equation for gluconeogenesis • 2Pyruvate + 4ATP +2GTP+ 2NADH + 2H+ + 6H2O  glucose +4ADP +2GDP +6Pi + 2 NAD + (DG = -38 kJ/mol) • Notice the extra ATPs and GTPs drive the process
  • 4. Glycolysis <-> gluconeogenesis Gluconeogenesis is not the reversal of glycolysis !!! Glycolysis: in the cytosol Gluconeogenesis: major part in cytosol -> 1st step in mitochondria -> shuttle Biotin: prosthetic group -> carrier for CO2 Reverse reaction of glycolysis thermodynamically not favorable !!! 4
  • 5.
  • 6. Glycolysis vs Gluconeogenesis • Glycolosis • Glucose (6C) to 2 pyruvates (3C) • Creates energy 2ATP • Reduces 2 NAD+ to 2 NADH • Active when energy in cell low • 10 steps from glucose to pyruvate • Pyruvate to AcCoA before Krebs • Gluconeogenesis • 2 pyruvates (3C) to Glucose (6C) • Consumes energy 4ATP+2GTP • Oxidizes 2NADH to 2 NAD+ • Active when energy in cell high • 11 steps from pyruvate to glucose • AcCoA isn’t used in gluconeogenesis Gluconeogenesis uses 7 of the 10 enzymatic reactions of glycolysis but in the reverse direction. The 3 not used are the ones requiring ATP in glycolysis.
  • 7. Synthesis of glucose from non-carbohydrate precursors: -> gluconeogenesis • Brain and blood cells depend on glucose -> 160g/day (mainly for the brain) • Glucose in the blood: 20g • Starvation > 1day  other metabolites for energy! -> Gluconeogenesis pathway: • Takes place in liver (and kidneys) • Important to maintain blood glucose level • Major precursors: glycerol, amino acids, lactic acid • Specific enzymes in addition to glycolysis (for the irreversible steps in glycosis) 7
  • 8. Synthesis of glucose from non-carbohydrate precursors: -> gluconeogenesis Pyruvate (end product of glycolysis) -> under aerobic conditions -> shuttle into Mitochondria -> converted into acetyl-CoA -> citric acid cycle Gluconeogenesis -> start with pyruvate in mitochondria 1st Step: convertion to oxaloacetate -> malate/oxaloacetate shuttle glycolysis 8
  • 9. Synthesis of glucose from non-carbohydrate precursors: -> gluconeogenesis Triacylglycerols (Lipids) taken up by diet -> brocken down to fatty acids and glycerol cannot be converted to glucose glucose 9
  • 10. Substrates for gluconeogenesis: Pyruvate Lactate Glycerol TCA cycle intermediates Most amino acids Not substrates for gluconeogenesis: Acetyl-CoA Fatty acids Lysine Leucine
  • 11. Regulatory enzymes of gluconeogenesis • Pyruvate carboxylase • PEP carboxykinase (PEPCK) • Fructose-1,6-bisphosphatase • Glucose-6-phosphatase
  • 12. First Reaction of Gluconeogenesis - recall that pyruvate is the final product of glycolysis. The pyruvate carboxylase reaction.
  • 13. Oxaloacetate is the starting material for gluconeogenesis
  • 14. Regulation of Gluconeogenesis Glucose-6-phosphatase is subject to substrate level control. - at higher G6P concentrations reaction rate increases - recall, this happens in the liver. Other tissues do not hydrolyze their G6P, thereby trapping it in the cells. Glycolysis and gluconeogenesis are reciprocally regulated. - regulatory molecules that inhibit gluconeogenesis often activate glycolysis, and vise versa.
  • 15. Pyruvate is converted to oxaloacetate before being changed to Phosphoenolpyruvate 1. Pyruvate carboxylase catalyses the ATP-driven formation of oxaloacetate from pyruvate and CO2 2. PEP carboxykinase (PEPCK) concerts oxaloacetate to PEP that uses GTP as a phosphorylating agent.
  • 16. Pyruvate carboxylase requires biotin as a cofactor Biotin is an essential cofactor in most carboxylation reactions. It is an essential vitamin in the human diet, but deficiencies are rare.
  • 17. Biotin is an essential nutrient There is hardly any deficiencies for biotin because it is abundant and bacteria in the large intestine also make it. However, deficiencies have been seen and are nearly always linked to the consumption of raw eggs. Raw eggs contain Avidin, a protein that binds biotin with a Kd = 10-15 (that is one tight binding reaction!) It is thought that Avidin protects eggs from bacterial invasion by binding bioitin and killing bacteria.
  • 18. Acetyl-CoA regulates pyruvate carboxylase Increases in oxaloacetate concentrations increase the activity of the Krebs cycle and acetyl-CoA is a allosteric activator of the carboxylase. However when ATP and NADH concentrations are high and the Krebs cycle is inhibited, oxaloacetate goes to glucose.
  • 19. Pyruvate is converted to oxaloacetate in the mitochondria Oxaloacetate cannot be transported directly across the mitochondrial membrane so it is converted to malate, then transported, then oxidized back to oxaloacetate.
  • 20. Transport between the mitochondria and the cytosol Generation of oxaloacetate occurs in the mitochondria only, but, gluconeogenesis occurs in the cytosol. Oxaloacetate are produced through pyruvate carboxylase, requires exiting the mitochondrion. Moreover, the inner mitochondrial membrane is not permeable to this compound. Therefore, oxaloacetate is converted to malate inside the mitochondrion through mitochondrial malate dehydrogenase, the malate is transported by the mitochondrial membrane through a special transport protein and then the malate is converted back to oxaloacetate in the cytoplasm through a cytosolic malate dehydrogenase.
  • 21.
  • 23. Nucleotide diphosphate kinases – Both glycolysis and Oxidative phosphorylation produce ATP with its high energy phoshoanhydride bonds: How does GTP get made from GDP? – Directly from a single step in the Krebs cycle AND from the following reaction – GDP + ATP → GTP + ADP – This is carried out in the cell by an enzyme called – Nucleotide diphosphate kinase which carries out the general reaction – NDP + ATP → NTP + ADP (where N is T, G, or C)
  • 24. Regulatory enzymes of gluconeogenesis • Pyruvate carboxylase • PEP carboxykinase (PEPCK) • Fructose-1,6-bisphosphatase • Glucose-6-phosphatase
  • 25.
  • 26. Last step of gluconeogenesis Free glucose is important control point -> pathway ends mostly with glucose-6-P -> finished just if glucose is needed (in blood) -> advantage of stopping at glucose-6-P -> trapped in the cell (cannot shuttle outside) Last step of gluconeogenesis: in ER lumen -> glucose shuttled back to cytosol -> leaves cell 26
  • 27. Regulatory enzymes of gluconeogenesis • Pyruvate carboxylase • PEP carboxykinase (PEPCK) • Fructose-1,6-bisphosphatase • Glucose-6-phosphatase
  • 28. Glucose-6-phosphatase -enzyme unique to liver and kidney allowing them to supply glucose to other tissues. Found in ER (endoplasmic reticulum). Glucose-6-phosphate cannot exit the cell, and so, in the liver, glucose 6- phosphate is transported into the endoplasmic reticulum, where it is converted into glucose by glucose 6-phosphatase.
  • 29. Fructose-2,6-bisphosphate •A potent allosteric regulatory molecule. •- activates phosphofructokinase. •- inhibits fructose-1,6-bisphosphatase. •- its synthesis and degradation are catalyzed by the same bifunctional enzyme.
  • 30. Fructose-2,6-bisphosphate • F2,6BP activates phosphofructokinase (PFK1) - the enzyme in glycolysis that converts fructose-6-phosphate to fructose- 1,6-bisphosphate. • F2,6BP also inhibits fructose-1,6- bisphosphatase (F1,6BPase) - the enzyme in gluconeogenesis. • F1,6BPase is ten times more sensitive to F2,6BP than AMP.
  • 31. • F2,6BP stimulates glycolysis • F2,6BP inhibits gluconeogenesis
  • 32. Fructose-2,6-bisphosphate activates glycolysis and inhibits gluconeogenesis, so its level is very important.
  • 33. • In the liver, the most important coordinating modulator is fructose 2,6-bisphophate (F2,6BP) • It is formed from F6P by the enzyme phosphofructokinase-2 (PFK-2) • It is broken down by the same enzyme, but at a different catalytic site in the enzyme – it’s a bifunctional protein -It is called fructose 2,6-bisphosphatase (FBPase-2) for this activity - Balance of PFK-2 to FBPase-2 activity controlled by -Glucagon -Insulin
  • 34. Reciprocal regulation of glycolysis & gluconeogenesis • Pathways not active at same time • Regulated by products of reaction and precursors (allostery) • Regulated by hormones: glucagon & insulin, through F-2,6-BP • Regulated at the transcriptional level of genes In the liver: aim is to maintain blood glucose level glucagon insulin transcription 34
  • 35. Balance between glycolysis and gluconeogenesis in the liver -> sensitive to blood glucose concentration - Regulated by a bifunctional enzyme: PFK2/FBPase2 -> formed by PFK2 -> hydrolysed (dephosphorylated) by FBPase2 Phosphofructokinase 2 Fructose bisphophatase 2 35
  • 36. 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase P Low glucose High glucagon Increased phosphorylation Phosphorylation of the enzyme results in the inactivation of the phosphofructokinase-2 activity and activation of the fructose-2,6- bisphosphatase activity. This results in a down regulation of glycolysis and increased gluconeogenesis.
  • 37. Balance between glycolysis and gluconeogenesis in the liver -> sensitive to blood glucose concentration Low blood-glucose level -> glucagon-> low level of F-2,6-BP High blood-glucose level -> insulin-> high level of F-2,6-BP 37
  • 38. • Fructose-2,6-bisphosphate, the most potent allosteric regulator of the glycolysis and gluconeogenesis pathways
  • 39. F2,6 BP ATP ADP Pi F2,6 BP PFK-1 PFK-2 INHIBITS F2,6 BP STIMULATES
  • 40. Regulators of gluconeogenic enzyme activity Enzyme Allosteric Allosteric Enzyme Protein Inhibitors Activators Phosphorylation Synthesis PFK ATP, citrate AMP, F2-6P FBPase AMP, F2-6P PK Alanine F1-6P Inactivates Pyr. Carb. AcetylCoA PEPCK Glucogon PFK-2 Citrate AMP, F6P, Pi Inactivates FBPase-2 F6P Glycerol-3-P Activates
  • 41.
  • 42. Synthesis of other saccharides through gluconeogenesis 42
  • 43. 43
  • 44. Regulation of Gluconeogenesis • Fate of pyruvate •Go on to citric acid cycle – requires conversion to Acetyl Co-A by the pyruvate dehydrogenase complex •Gluconeogenesis – first step is conversion to oxaloacetate by pyruvate carboxylase • Acetyl Co-A accumulation • inhibits pyruvate dehydrogenase • activates pyruvate carboxylase
  • 45. Coordinated regulation of PFK-1 and FBPase-1 (1) Phosphofructokinase-1 (PFK-1) (glycolysis) (2) Fructose 1,6-bisphosphatase FBPase-1 (gluconeogenesis) • Modulating one enzyme in a substrate cycle will alter the flux through the two opposing pathways • Two coordinating modulators •AMP •Fructose 2,6-bisphosphate • Inhibiting PFK-1 stimulates gluconeogenesis • Inhibiting the phosphatase stimulates glycolysis • AMP concentration coordinates regulation • stimulates glycolysis • Inhibits gluconeogenesis
  • 47. Cori Cycle • Muscular activity leads to the release of epinephrine by the adrenal medulla. • During muscle contractions, ATP is constantly being used to supply energy and more ATP is produced. • At first glycolysis produces pyruvic acid which is then converted into acetyl CoA and is metabolized in the citric acid cycle to make ATP. • If muscular activity continues, the availability of oxygen becomes the limiting factor and the cells soon exhaust their supplies of oxygen. • However, glycolysis continues even under anaerobic conditions even though the citric acid cycle works only under aerobic conditions.
  • 48. Cori Cycle (cont.) • The final limiting factor in continued muscular activity is the build up of lactic acid. The lactic acid eventually produces muscular pain which force discontinuation of activity. • The lactic acid is sent in the blood to the liver which can convert it back to pyruvic acid and then to glucose through gluconeogenesis. • The glucose can enter the blood and be carried to muscles • If by this time the muscles have ceased activity, the glucose can be used to rebuild supplies of glycogen through glycogenesis.
  • 49. Cori Cycle (cont.) Liver Cell • At this time the oxygen debt can be made up so that the citric cycle and electron transport chain also begin to function again. In order for most of the lactic acid to be converted to glucose, some must be converted to pyruvic acid and then to acetyl CoA
  • 52. Sample questions • There are four enzymes of gluconeogenesis that circumvent the irreversible steps in glycolysis. When starting with the substrate pyruvate or lactate they are • A. Hexokinase, phosphofructokinase-1, phosphofructokinase-2 and pyruvate kinase • B. Pyruvate carboxylase, phosphoenolpyruvate carboxykinase, fructose-1,6-bisphosphatase, and glucose-6-phosphatase • C. Glycerol kinase, glycerol-3-phosphate dehydrogenase, fructose-2,6-bisphosphatase, and glucose-6-phosphatase • D. Amino transferase, phosphoenolpyruvate carboxykinase, fructose-2,6-bisphosphatase, and glucose-6-phosphatase
  • 53. Sample questions • The enzymes that remove phosphate groups during the process of gluconeogenesis and circumvent two of the three irreversible reactions of glycolysis are • A. Pyruvate kinase and glycerol kinase • B. Phosphoenolpyruvate carboxykinase and glycerol kinase • C. 3-Phosphoglycerate kinase and fructose-1,6- bisphosphatase • D. Fructose-1,6-bisphosphatase and glucose-6- phosphatase
  • 55. Glycogen Metabolism • Glycogenolysis is a process by which glycogen is broken down into glucose to provide immediate energy and to maintain blood glucose levels during fasting. • Glycogenesis is the formation of glycogen from glucose.
  • 56. • Glycogenolysis occurs primarily in the liver and is stimulated by the hormones glucagon and epinephrine (adrenaline). • When blood glucose levels fall, as during fasting, there is an increase in glucagon secretion from the pancreas. This increase is accompanied by a decrease in insulin secretion. • Insulin is aimed at increasing the storage of glucose in the form of glycogen
  • 57. Regulation of Glycogen Metabolism • Muscle glycogen is fuel for muscle contraction • Liver glycogen is mostly converted to glucose for bloodstream transport to other tissues • Both mobilization and synthesis of glycogen are regulated by hormones • Insulin, glucagon and epinephrine regulate mammalian glycogen metabolism (hormones) • Ca2+ and [AMP]/[ATP] (muscle glycogen phosphorylase) • [glucose] (liver glycogen phosphorylase) • [glucose 6-phosphate] (glycogen synthase) • Hormones •Insulin is produced by b-cells of the pancreas -increases glucose transport into muscle, adipose tissue via GLUT 4 transporter -stimulates glycogen synthesis in the liver
  • 58. • Glucagon Secreted by the a cells of the pancreas in response to low blood glucose (elevated glucagon is associated with the fasted state) -Stimulates glycogen degradation to restore blood glucose to steady-state levels -Only liver cells are rich in glucagon receptors • Epinephrine (adrenaline) Released from the adrenal glands in response to sudden energy requirement (“fight or flight”) - Stimulates the breakdown of glycogen to G1P (which is converted to G6P) -Increased G6P levels increase both the rate of glycolysis in muscle and glucose release to the bloodstream from the liver
  • 59. Glucagon/Epinephrine control of glycogen synthesis/degradation
  • 60. Signal cascade initiated by epinephrine
  • 61. • 1) Epinephrine binds to a receptor on the muscle cell membrane and stimulates adenyl cyclase in the membrane. • 2) Adenyl cyclase in the membrane catalyzes the formation of cyclic AMP from ATP. • 3) The increase of cyclic AMP activates a protein kinase. The binding of cyclic AMP to an enzyme is an allosteric control where the enzyme is "switched on" for activity. • 4) The protein kinase causes phosphorylations (addition of phosphate) on a series of phosphorylation enzymes which activates them to finally produce glucose-1-phosphate. At the same time that enzymes are being activated for glycogen breakdown, glycogen synthetase enzyme must be inactivated. Glycogenesis must be "switched off" and glycogenolysis "switched on." • 5) Glucose-6-phosphate is the final result of the initial stimulation by epinephrine or other hormones such as glucagon. If this happened to a muscle cell, then the glycolysis pathway is the next step in the sequence. If this happened to a liver cell stimulated by glucagon, then glucose is produced to enter the blood stream.
  • 62. • Epinephrine markedly stimulates glycogen breakdown in muscles and, to a lesser extent, in the liver. • Muscular activity quickly uses stored ATP as the energy source and more ATP must be generated by the breakdown of glycogen.
  • 63. • At first glycolysis produces pyruvic acid which is then converted into acetyl CoA and is metabolized in the citric acid cycle to make ATP. • If muscular activity continues, the cells soon exhaust their supplies of oxygen. When this happens, the citric acid cycle is inhibited and causes pyruvic acid to accumulate. • However, glycolysis continues even under anaerobic conditions even though the citric acid cycle works only under aerobic conditions. Glycogenolysis is stimulated to make more glucose-6-phosphate. • When the cells become anaerobic, glycolysis continues if pyruvic acid is converted to lactic acid. Liver Cell
  • 65. High Blood Glucose: Insulin lowers blood glucose levels
  • 66. Glycogen Storage • Glycogen is a D-glucose polymer • a(1®4) linkages • a(1®6) linked branches every 8-14 residues
  • 68. Glycogen Breakdown Glycogen Synthesis Glucose Glycogen Glucose Glycogen Synthesis R
  • 69. Glycogen Breakdown or Glycogenolysis
  • 70. • Three steps – Glycogen phosphorylase Glycogen + Pi <-> glycogen + G1P (n residues) (n-1 residues) – Glycogen debranching – Phosphofructomutase Glycogen Breakdown
  • 71. Glycogen Breakdown Glycogen Synthesis Glucose Glycogen Glucose Glycogen Breakdown R
  • 72. Glycogen Phosphorylase Requires Pyridoxal-5’-phosphate PLP
  • 75. Glycogen phosphorylase is activated upon phosphorylation by phosphorylase kinase. Phosphorylase kinase is activated upon phosphorylation by protein kinase A (PKA). PKA is activated by cyclic AMP, which is produced by a G-protein in response to epinephrine/glucagon.
  • 76. Reciprocal Regulation of Glycogen Phosphorylase and Glycogen Synthase • Glycogen phosphorylase (GP) and glycogen synthase (GS) control glycogen metabolism in liver and muscle cells • GP and GS are reciprocally regulated both covalently and allosterically (when one is active the other is inactive) • Covalent regulation by phosphorylation (-P) and dephosphorylation (-OH) COVALENT MODIFICATION (Hormonal control) Active form “a” Inactive form “b” Glycogen phosphorylase -P -OH Glycogen synthase -OH -P Allosteric regulation of GP and GS GP a (active form) - inhibited by Glucose GP (muscle)- stimulated by Ca2+ and high [AMP] GS b (inactive form) - activated by Glucose 6-Phosphate
  • 77. Control of glycogen phosphorylase phosphorylase b (inactive) phosphorylase a (active) phosphorylation glycogen breakdown
  • 78. • Hormones initiate enzyme cascades •Catalyst activates a catalyst activates a catalyst, etc. • When blood glucose is low: epinephrine and glucagon activate protein kinase A • Glycogenolysis is increased (more blood glucose) • Glycogen synthesis is decreased
  • 79.
  • 80.
  • 81. 81 Regulation of blood glucose level in the liver
  • 82. Glycogen Breakdown Step 1. Glycogen Phosphorylase Fig 15-12
  • 88. Sample questions • The most important control step in gluconeogenesis is fructose-1,6- bisphosphatase. All of the following statements are true EXCEPT • A. Fructose-1,6-bisphosphatase converts fructose-2,6-bisphosphate to fructose-6-phosphate • B. During times when insulin is high, fructose-1,6-bisphosphatase is inhibited by fructose-2,6-bisphosphate • C. During a fast or exercise when glucagon and/or epinephrine are high, fructose-1,6-bisphosphatase is active because of the absence of fructose-2,6-bisphosphate • D. Glycolysis or gluconeogenesis cannot be active at the same time. If they were is would be a futile cycle
  • 89. Sample questions • In the liver, glucagon will activate • A. Glycolysis and glycogen synthesis • B. Gluconeogenesis and glycogenolysis • C. Gluconeogenesis and glycogen synthase • D. Gluconeogenesis and glycogen synthesis • Which of the following statements about hormonal levels during different states is true? • A. During the time you are eating a high carbohydrate mixed meal, the insulin to glucagon ratio will decrease • B. When passing from the fed to fasting state, insulin and glucagon usually decrease • C. When playing basketball, epinephrine is usually low and insulin is high • D. After running for 20 miles, epinephrine and glucagon are high and insulin is low
  • 90. Sample questions • All of the following will result in activation of glycogen phosphorylase in skeletal muscle EXCEPT • A. Increased concentrations of AMP from contraction of muscle • B. Increased epinephrine and cAMP • C. Increased cytosolic [Ca++] • D. Increased protein phosphatase • E. Increased activity of glycogen phosphorylase kinase
  • 91. Experiment for next week • Separation of Ferrihemoglobin and Potassium Ferricyanide by Gel Filtration Chromatography • Changed to Construction of Serum Protein Standard Curve using Folin's Phenol Method

Editor's Notes

  1. The pathways of gluconeogenesis and glycolysis. Species in blue, green, and peach-colored shaded boxes indicate other entry points for gluconeogenesis (in addition to pyruvate).
  2. Covalent linkage of biotin to an activesite lysine in pyruvate carboxylase.
  3. The pathways of gluconeogenesis and glycolysis. Species in blue, green, and peach-colored shaded boxes indicate other entry points for gluconeogenesis (in addition to pyruvate).