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PAPER 4
1
PRINCIPLE OF TRANSMISSION
ELECTRON MICROSCOPE
INTRODUCTION
2
 Electron microscopes are scientific instruments
that use a beam of energetic electrons to
examine objects on a very fine scale.
 It has greater magnification than light
microscope and hence we can see things that we
would not normally be able to see with our naked
eyes.
 10,000X plus magnification, not possible using
current optical microscopes.
TRANSMISSION ELECTRON
MICROSCOPE (TEM)
3
 TEM was the first type of electron microscope to
be developed and it is patterned exactly on the
light microscope except for it uses a focused
beam of electrons instead of light to see through
the specimen.
 Developed by Max Knoll and Ernst Ruska,
Germany, 1931.
MICROSCOPE RESOLUTION MAGNIFICATION
OPTICAL 200 nm 1000X
TEM 0.2 nm 5,00000X
TEM
4
 It is a microscopy technique whereby a beam of
electrons is transmitted through an ultra thin
specimen, interacting with the specimen as it
passes through. An image is formed from the
interaction of electrons transmitted through the
specimen; the image is magnified and focuses
onto an imaging device, such as a fluorescent
screen, on a layer of photographic film, or to be
detected by a sensor such as a CCD camera.
REPRESENTATION OF TEM’S
WORKING
5
JEM-1010 TEM
6
7
TEM
8
 Source of illumination : a beam of electrons of
very short wavelength emitted from a tungsten
filament.
Optical system is enclosed in vacuum so as to
avoid collision with air molecules and scattering of
electrons.
 Tungsten filament : heated filament emits
electrons that are accelerated by the voltage in
the anode.
higher anode voltage higher electron speed
shorter
wavelength increased resolution.
TEM
9
 Magnetic columns : placed at specific intervals
in the column. acts as
electromagnetic condenser lens system and
focuses the electron beam.
 Specimen : stained with electron dense material.
placed in vacuum.
electron beams pass through the specimen and
are scattered
by internal structures.
TEM
10
 Transmitted beam : carries information regarding
the structure of the specimen.
 Magnetic lenses : magnify the spatial variation in
the information (image).
 Image recorder : fluorescent screen,
photographic plate, light sensitive sensor like
CCD camera.
 Image display : real time on a monitor or
computer.
ELECTRON GUN
11
• The function of an electron gun is to emit an
intense beam of electrons into the vacuum
which accelerates the between the cathode and
the anode. The metals contain free
electrons. The valence are free electrons, which
are loosely bound in the nucleus.
Those electrons cannot escape from the metal
surface . The positively charged nucleus will try to
pull back the free electrons when they try to
escape from the surface. Hence the electrons
have to overcome the potential barrier in order
to escape from the surface of the metals. The
energy required to overcome this potential barrier
continue
12
 Work function, φ, is the minimum energy in
electron volts required to remove an electron from
the metal surface. If the electrons in metals are to
be emitted from the cathode they have to
overcome the work function.
Electrons are emitted from a metal by two
methods:
 Thermionic emission: In this method the
electrons are emitted from the metals by heating
them.
 Field emission: In this method the electrons are
emitted from metals, under strong electric fields.
SAMPLE PREPARATION
13
 Sample preparation is important for electron
microscopy. There are three main steps for
sample preparation: Processing, embedding
and polymerization.
Processing
This includes: fixation, rinsing, post fixation,
dehydration and infiltration.
 1) Fixation : This is done to preserve the sample
and to prevent further deterioration so that it
appears as close as possible to the living state,
although it is dead now.
 Eg. Gluteraldehyde fixation for proteins.
continue
14
 2) Rinsing : The samples should be washed with
a buffer to maintain the pH. This prevents extra
acidity.
 3) Post fixation : A secondary fixation with
osmium tetroxide (OsO4), which is to increase
the stability and contrast of fine structure.
 4) Dehydration : The water content in the tissue
sample should be replaced with an organic
solvent since the epoxy resin used in infiltration
and embedding step are not miscible with water.
continue
15
 5) Infiltration : Epoxy resin is used to infiltrate
the cells. It penetrates the cells and fills the space
to give hard plastic material which will tolerate the
pressure of cutting.
Embedding
After processing the next step is embedding. This is
done using flat molds.
Polymerization
Next is polymerization step in which the resin is
allowed to set overnight at a temperature of 60 degree
in an oven.
continue
16
 Sectioning : The specimen must be cut into
very thin sections for electron microscopy so that
the electrons are semitransparent to electrons.
OTHER METHODS OF SAMPLE
PREPARATION
17
 1. CRYOFIXATION : Like chemical fixatives, it
stops the metabolic processes and preserves
biological structure.
The method involves ultra rapid cooling of
small samples to liquid nitrogen temperature (-
196°C) or below thus stopping all motion and
metabolic activity, and preserving the internal
structure by freezing all fluid phases solid.
continue
18
 2. NEGATIVE STAINING : The main purpose of
negative staining is to surround or embed the
biological object in a suitable electron dense
material which provides high contrast and good
preservation.
This method is capable of providing information
about structural details often finer than those
visible in thin sections, replicas or shadowed
specimens.
In addition to the possibility of obtaining a
spectacular enchantment of contrast, it has
advantage of speed and simplicity.
continue
19
 3. SHADOW CASTING : The grid containing the
specimen are placed in sealed chamber which is
evacuated by vacuum pump.
The chamber contains a filament composed of a
heavy metal together with carbon.
continue
20
 4. FREEZE FRACTURE REPLICATION AND
FREEZE ETCHING : Small pieces of tissues are
placed on a small metal disk and rapidly frozen.
The disk is then mounted on a cooled stage
within a vacuum chamber and a frozen tissue block
is struck by a knife edge.
The resulting fracture plane spreads out from the
point of contact, splitting the tissue into two pieces.
continue
21
continue
22
TEM IMAGE OF T4
BACTERIOPHAGE ATTACKING
HOST
23
TEM IMAGE OF S. aureus
24
TEM PLATINUM REPLICA IMAGE
OF S.aureus
25
TEM IMAGE OF POLIO VIRUS
26
CONCLUSION
27
 Like in any multistep preparation procedure,
virtually every step can affect the quality of the
final electron micrograph.
 A single mistake in one of these steps will affect
all the remaining steps, and thus the outcome of
the entire study.
 Most of the chemicals used in these procedures
are chemically dangerous and potentially
hazardous.
 These procedures are time consuming and
require skills.
REFERENCES
28
 Wikipedia
 Google images
 Research Gate
THANKYOU!
29

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Principle of transmission electron microscope.

  • 1. PAPER 4 1 PRINCIPLE OF TRANSMISSION ELECTRON MICROSCOPE
  • 2. INTRODUCTION 2  Electron microscopes are scientific instruments that use a beam of energetic electrons to examine objects on a very fine scale.  It has greater magnification than light microscope and hence we can see things that we would not normally be able to see with our naked eyes.  10,000X plus magnification, not possible using current optical microscopes.
  • 3. TRANSMISSION ELECTRON MICROSCOPE (TEM) 3  TEM was the first type of electron microscope to be developed and it is patterned exactly on the light microscope except for it uses a focused beam of electrons instead of light to see through the specimen.  Developed by Max Knoll and Ernst Ruska, Germany, 1931. MICROSCOPE RESOLUTION MAGNIFICATION OPTICAL 200 nm 1000X TEM 0.2 nm 5,00000X
  • 4. TEM 4  It is a microscopy technique whereby a beam of electrons is transmitted through an ultra thin specimen, interacting with the specimen as it passes through. An image is formed from the interaction of electrons transmitted through the specimen; the image is magnified and focuses onto an imaging device, such as a fluorescent screen, on a layer of photographic film, or to be detected by a sensor such as a CCD camera.
  • 7. 7
  • 8. TEM 8  Source of illumination : a beam of electrons of very short wavelength emitted from a tungsten filament. Optical system is enclosed in vacuum so as to avoid collision with air molecules and scattering of electrons.  Tungsten filament : heated filament emits electrons that are accelerated by the voltage in the anode. higher anode voltage higher electron speed shorter wavelength increased resolution.
  • 9. TEM 9  Magnetic columns : placed at specific intervals in the column. acts as electromagnetic condenser lens system and focuses the electron beam.  Specimen : stained with electron dense material. placed in vacuum. electron beams pass through the specimen and are scattered by internal structures.
  • 10. TEM 10  Transmitted beam : carries information regarding the structure of the specimen.  Magnetic lenses : magnify the spatial variation in the information (image).  Image recorder : fluorescent screen, photographic plate, light sensitive sensor like CCD camera.  Image display : real time on a monitor or computer.
  • 11. ELECTRON GUN 11 • The function of an electron gun is to emit an intense beam of electrons into the vacuum which accelerates the between the cathode and the anode. The metals contain free electrons. The valence are free electrons, which are loosely bound in the nucleus. Those electrons cannot escape from the metal surface . The positively charged nucleus will try to pull back the free electrons when they try to escape from the surface. Hence the electrons have to overcome the potential barrier in order to escape from the surface of the metals. The energy required to overcome this potential barrier
  • 12. continue 12  Work function, φ, is the minimum energy in electron volts required to remove an electron from the metal surface. If the electrons in metals are to be emitted from the cathode they have to overcome the work function. Electrons are emitted from a metal by two methods:  Thermionic emission: In this method the electrons are emitted from the metals by heating them.  Field emission: In this method the electrons are emitted from metals, under strong electric fields.
  • 13. SAMPLE PREPARATION 13  Sample preparation is important for electron microscopy. There are three main steps for sample preparation: Processing, embedding and polymerization. Processing This includes: fixation, rinsing, post fixation, dehydration and infiltration.  1) Fixation : This is done to preserve the sample and to prevent further deterioration so that it appears as close as possible to the living state, although it is dead now.  Eg. Gluteraldehyde fixation for proteins.
  • 14. continue 14  2) Rinsing : The samples should be washed with a buffer to maintain the pH. This prevents extra acidity.  3) Post fixation : A secondary fixation with osmium tetroxide (OsO4), which is to increase the stability and contrast of fine structure.  4) Dehydration : The water content in the tissue sample should be replaced with an organic solvent since the epoxy resin used in infiltration and embedding step are not miscible with water.
  • 15. continue 15  5) Infiltration : Epoxy resin is used to infiltrate the cells. It penetrates the cells and fills the space to give hard plastic material which will tolerate the pressure of cutting. Embedding After processing the next step is embedding. This is done using flat molds. Polymerization Next is polymerization step in which the resin is allowed to set overnight at a temperature of 60 degree in an oven.
  • 16. continue 16  Sectioning : The specimen must be cut into very thin sections for electron microscopy so that the electrons are semitransparent to electrons.
  • 17. OTHER METHODS OF SAMPLE PREPARATION 17  1. CRYOFIXATION : Like chemical fixatives, it stops the metabolic processes and preserves biological structure. The method involves ultra rapid cooling of small samples to liquid nitrogen temperature (- 196°C) or below thus stopping all motion and metabolic activity, and preserving the internal structure by freezing all fluid phases solid.
  • 18. continue 18  2. NEGATIVE STAINING : The main purpose of negative staining is to surround or embed the biological object in a suitable electron dense material which provides high contrast and good preservation. This method is capable of providing information about structural details often finer than those visible in thin sections, replicas or shadowed specimens. In addition to the possibility of obtaining a spectacular enchantment of contrast, it has advantage of speed and simplicity.
  • 19. continue 19  3. SHADOW CASTING : The grid containing the specimen are placed in sealed chamber which is evacuated by vacuum pump. The chamber contains a filament composed of a heavy metal together with carbon.
  • 20. continue 20  4. FREEZE FRACTURE REPLICATION AND FREEZE ETCHING : Small pieces of tissues are placed on a small metal disk and rapidly frozen. The disk is then mounted on a cooled stage within a vacuum chamber and a frozen tissue block is struck by a knife edge. The resulting fracture plane spreads out from the point of contact, splitting the tissue into two pieces.
  • 23. TEM IMAGE OF T4 BACTERIOPHAGE ATTACKING HOST 23
  • 24. TEM IMAGE OF S. aureus 24
  • 25. TEM PLATINUM REPLICA IMAGE OF S.aureus 25
  • 26. TEM IMAGE OF POLIO VIRUS 26
  • 27. CONCLUSION 27  Like in any multistep preparation procedure, virtually every step can affect the quality of the final electron micrograph.  A single mistake in one of these steps will affect all the remaining steps, and thus the outcome of the entire study.  Most of the chemicals used in these procedures are chemically dangerous and potentially hazardous.  These procedures are time consuming and require skills.
  • 28. REFERENCES 28  Wikipedia  Google images  Research Gate