Clostridium perfringens is a gram-positive, anaerobic bacterium that can cause gas gangrene. It forms spores that allow it to survive in soil and intestines. C. perfringens produces several toxins that damage tissues and cause diseases like gas gangrene. The bacterium thrives under low-oxygen conditions in dead or damaged tissue where it releases toxins and enzymes that destroy muscle and skin. Its toxins and enzymes damage cells and spread the infection, resulting in tissue necrosis if not treated with antibiotics.
This document summarizes types and features of bloodstream infections (bacteremia and sepsis). It describes different types of bacteremia including intermittent, continual, and those related to infections in the bloodstream, artificial materials, and special circumstances. It also outlines features of sepsis, types according to origin, fulminant sepsis, and nosocomial sepsis. Diagnosis involves blood cultures and treatment involves empiric antibiotics, removal of infected tissues/devices, and organ support.
This document discusses bloodstream infections, including definitions, types, causes, and trends. It defines terms like bacteremia, sepsis, and community-acquired versus nosocomial bloodstream infections. Primary bloodstream infections often originate from intravascular devices, while secondary infections usually stem from a focus elsewhere in the body. Common pathogens have changed over time and vary based on healthcare or community setting. Prompt diagnosis and treatment are important given the high mortality rates associated with severe sepsis and septic shock.
This document discusses Methicillin Resistant Staphylococcus aureus (MRSA). It begins by providing taxonomic classification of Staphylococcus and describes MRSA's resistance to beta-lactam antibiotics due to acquisition of mecA or mecC genes. It then distinguishes between healthcare-associated MRSA (HA-MRSA), community-associated MRSA (CA-MRSA), and livestock-associated MRSA (LA-MRSA) based on their environments, infections caused, genetic characteristics, and risk factors. Molecular typing methods are also used to identify major epidemic MRSA clones.
Yersinia pestis is a gram-negative rod that causes plague. It is primarily transmitted between rodents like rats, mice and squirrels via flea bites. Humans are accidental hosts. There are three main forms of plague infection: bubonic plague causes swollen lymph nodes, septicemic plague causes fever and hypotension, and pneumonic plague causes cough and bloody sputum. Yersinia enterocolitica and Y. pseudotuberculosis can cause gastrointestinal illness in humans after consuming contaminated food, especially pork.
This document summarizes information about the bacteria Klebsiella. It belongs to the genus Klebsiella within the family Enterobacteriaceae. Klebsiella is a facultative anaerobe found in the normal flora of humans. It can cause various opportunistic infections especially in immunocompromised individuals. While some Klebsiella infections respond to antibiotics, some strains have developed resistance. Carbapenem-resistant Klebsiella pneumoniae can be difficult to treat.
This document discusses ESBL (Extended Spectrum Beta Lactamases) which confer bacterial resistance to several classes of beta-lactam antibiotics. Early diagnosis of ESBL-producing pathogens is important to reduce mortality and morbidity. The document then describes several confirmatory tests for ESBL production, focusing on the double disk synergy test. This test involves placing disks containing beta-lactam antibiotics and amoxicillin-clavulanic acid on an inoculated agar plate. A positive result is indicated by a clear extension of the inhibition zone between the antibiotic and amoxicillin-clavulanic acid disks.
MRSA is a bacteria that is resistant to methicillin and other antibiotics such as penicillin. It can cause dangerous infections in humans. MRSA spreads through direct contact with infected individuals or surfaces and is a concern in healthcare settings. Symptoms of MRSA infection vary depending on the site of infection but may include boils, abscesses, or cellulitis. Treatment involves draining infections and administering antibiotics, with more serious cases requiring hospitalization. Preventing the spread of MRSA requires good hand hygiene and avoiding sharing personal items.
Clostridium perfringens is a gram-positive, anaerobic bacterium that can cause gas gangrene. It forms spores that allow it to survive in soil and intestines. C. perfringens produces several toxins that damage tissues and cause diseases like gas gangrene. The bacterium thrives under low-oxygen conditions in dead or damaged tissue where it releases toxins and enzymes that destroy muscle and skin. Its toxins and enzymes damage cells and spread the infection, resulting in tissue necrosis if not treated with antibiotics.
This document summarizes types and features of bloodstream infections (bacteremia and sepsis). It describes different types of bacteremia including intermittent, continual, and those related to infections in the bloodstream, artificial materials, and special circumstances. It also outlines features of sepsis, types according to origin, fulminant sepsis, and nosocomial sepsis. Diagnosis involves blood cultures and treatment involves empiric antibiotics, removal of infected tissues/devices, and organ support.
This document discusses bloodstream infections, including definitions, types, causes, and trends. It defines terms like bacteremia, sepsis, and community-acquired versus nosocomial bloodstream infections. Primary bloodstream infections often originate from intravascular devices, while secondary infections usually stem from a focus elsewhere in the body. Common pathogens have changed over time and vary based on healthcare or community setting. Prompt diagnosis and treatment are important given the high mortality rates associated with severe sepsis and septic shock.
This document discusses Methicillin Resistant Staphylococcus aureus (MRSA). It begins by providing taxonomic classification of Staphylococcus and describes MRSA's resistance to beta-lactam antibiotics due to acquisition of mecA or mecC genes. It then distinguishes between healthcare-associated MRSA (HA-MRSA), community-associated MRSA (CA-MRSA), and livestock-associated MRSA (LA-MRSA) based on their environments, infections caused, genetic characteristics, and risk factors. Molecular typing methods are also used to identify major epidemic MRSA clones.
Yersinia pestis is a gram-negative rod that causes plague. It is primarily transmitted between rodents like rats, mice and squirrels via flea bites. Humans are accidental hosts. There are three main forms of plague infection: bubonic plague causes swollen lymph nodes, septicemic plague causes fever and hypotension, and pneumonic plague causes cough and bloody sputum. Yersinia enterocolitica and Y. pseudotuberculosis can cause gastrointestinal illness in humans after consuming contaminated food, especially pork.
This document summarizes information about the bacteria Klebsiella. It belongs to the genus Klebsiella within the family Enterobacteriaceae. Klebsiella is a facultative anaerobe found in the normal flora of humans. It can cause various opportunistic infections especially in immunocompromised individuals. While some Klebsiella infections respond to antibiotics, some strains have developed resistance. Carbapenem-resistant Klebsiella pneumoniae can be difficult to treat.
This document discusses ESBL (Extended Spectrum Beta Lactamases) which confer bacterial resistance to several classes of beta-lactam antibiotics. Early diagnosis of ESBL-producing pathogens is important to reduce mortality and morbidity. The document then describes several confirmatory tests for ESBL production, focusing on the double disk synergy test. This test involves placing disks containing beta-lactam antibiotics and amoxicillin-clavulanic acid on an inoculated agar plate. A positive result is indicated by a clear extension of the inhibition zone between the antibiotic and amoxicillin-clavulanic acid disks.
MRSA is a bacteria that is resistant to methicillin and other antibiotics such as penicillin. It can cause dangerous infections in humans. MRSA spreads through direct contact with infected individuals or surfaces and is a concern in healthcare settings. Symptoms of MRSA infection vary depending on the site of infection but may include boils, abscesses, or cellulitis. Treatment involves draining infections and administering antibiotics, with more serious cases requiring hospitalization. Preventing the spread of MRSA requires good hand hygiene and avoiding sharing personal items.
Streptococcus pneumoniae, also known as pneumococcus, is a type of bacteria commonly found in the respiratory tract that can cause illnesses like pneumonia, ear infections, and sinus infections. It is a gram-positive, facultative anaerobic bacteria that is often found in pairs and does not form spores or exhibit motility. Pneumococcus bacteria are usually spread through respiratory droplets from coughing or sneezing of an infected person. Symptoms can include fever, chills, chest pain, cough, and confusion in the elderly. The infection is diagnosed by growing the bacteria from specimens and treated with antibiotics like penicillin, ampicillin, or ceftriaxone depending on the susceptibility of the strain.
This document discusses opportunistic pathogens and infections. It begins by defining an opportunistic pathogen as a microorganism that normally does not cause disease but can do so when the host's immune system is compromised. Examples of opportunistic bacteria that can cause infections in HIV/AIDS patients are provided, including Campylobacter, Flavobacterium, Pseudomonas, and Salmonella. The document also discusses two specific opportunistic pathogens in more detail: Pseudomonas aeruginosa and Escherichia coli (E. coli). It provides information on their characteristics, infections they can cause, and prevention strategies.
Blood stream infections- clinical microbiologySijo A
Blood stream infections (BSI) refers to the presence of organisms in blood which are threat to every organ in the body.
It causes shock, multiple organ failure and DIC (Disseminated Intravascular Coagulation).
The presence of bacteria in blood is called Bacteremia.
The bacteria circulate and actively multiply in the blood stream is called Septicemia.
The presence of virus in blood is called Viremia.
The presence of parasite in blood is called Parasitemia.
The presence of fungi in blood is called Fungemia.
This document discusses Streptococcus pneumoniae, a common bacterium that can cause pneumonia, meningitis, and other infections. It describes the morphology and cultural characteristics of S. pneumoniae, including that it appears as paired diplococci and forms alpha-hemolytic colonies on blood agar. It also covers the antigenic properties, virulence factors, pathogenicity, epidemiology, laboratory diagnosis, prophylaxis, and treatment of infections caused by S. pneumoniae.
This document discusses various types of bloodstream infections including bacteraemia, septicaemia, and infective endocarditis. It provides details on the causative agents, pathogenesis, clinical features, complications, diagnosis and prevention. The key points are:
- Bacteraemia refers to the presence of bacteria in the blood without multiplication, while septicaemia involves bacterial multiplication in the bloodstream.
- Common causative agents of septicaemia are gram-negative bacilli and gram-positive cocci such as Staphylococcus aureus.
- Infective endocarditis involves bacterial or fungal infection of the heart valves, with predisposing factors like rheumatic heart disease or intravenous drug
MRSA is a type of staph bacteria that has become resistant to common antibiotics used to treat staph infections. MRSA infections can range from minor to life-threatening. MRSA bacteria can live on surfaces for several days and is spread through direct contact with infected individuals or contaminated surfaces and items. Those at highest risk include individuals in crowded settings like hospitals and schools, athletes, military recruits, and people who overuse antibiotics. However, healthy individuals can also contract MRSA through community settings. MRSA has also been found in household pets.
presentation talking about streptococcus pneumonia ,identification of streptococcus pneumonia ,virulence factors of streptococcus pneumonia and mechanism of pathogenesis
Haemophilus is a genus of bacteria that includes species normally found in the human respiratory tract as well as pathogenic species. H. influenzae is the most clinically important species and is a cause of pneumonia, septic arthritis, epiglottitis, and meningitis. H. influenzae is a small, non-motile, gram-negative coccobacillus that requires both Factor X and V for growth. Serotype b of H. influenzae causes the majority of invasive disease and was an important cause of childhood meningitis prior to the introduction of the Hib vaccine.
Streptococcus pneumoniae, commonly known as pneumococcus, is a gram-positive bacterium that is a major cause of pneumonia, meningitis, and sepsis. It was first observed in 1881 and its relationship to pneumonia was established in 1886. It is a lancet-shaped diplococcus that appears in pairs and is encapsulated. Pneumococcus can be identified through its morphology, culture characteristics, and reactions like optochin sensitivity and bile solubility. It is a human pathogen that can cause diseases like pneumonia, meningitis, and sepsis. Vaccines like PCV7 for children and PPV23 for adults help prevent pneumococcal infections.
Acinetobacter is a gram-negative bacteria that was discovered in 1911. It naturally inhabits soil and water and can cause infections in humans and animals. While commonly found on healthy human skin, it can also cause serious multidrug-resistant infections, especially in hospital settings. These infections include pneumonia, bloodstream infections, meningitis, and wound or urinary tract infections. Treatment is challenging due to high rates of resistance, but may include colistin, tigecycline, carbapenems, or polymyxins depending on the infection type and susceptibility results.
This document discusses carbapenamases, which are beta-lactamase enzymes that can hydrolyze carbapenem antibiotics, rendering them ineffective. It notes that carbapenamases are an emerging problem and now represent one of the most versatile beta-lactamase families. The document summarizes the main types of carbapenamases, including KPC, NDM, VIM, and OXA. It discusses the increasing spread of resistant bacteria producing these enzymes worldwide and outlines challenges for detection and treatment. Laboratory tests for detecting carbapenamase activity like the modified Hodge test are also summarized.
This document discusses Staphylococcus, including S. aureus. It describes the morphology and cultural characteristics of S. aureus, noting it is a gram-positive coccus that grows in clusters and produces golden yellow pigment on blood agar. S. aureus can cause a variety of infections through production of enzymes and toxins. Laboratory diagnosis involves gram staining, culturing, and coagulase testing of samples. Treatment often involves cephalosporins due to high resistance of S. aureus to penicillin.
The document provides guidelines for collecting blood cultures to detect bloodstream infections. It states that blood cultures should only be collected when there is a clinical indication of sepsis based on symptoms such as fever, tachycardia, or confusion. It emphasizes the importance of following proper technique to minimize contamination, including cleaning the skin with chlorhexidine, collecting cultures through a newly inserted needle before other blood draws, and clearly labelling the sample source. The document also provides step-by-step instructions for collecting both peripheral blood cultures and cultures from central venous access devices.
Nocardia are aerobic, gram-positive bacteria that are ubiquitous environmental saprophytes found in soil. They cause opportunistic infections in both immunocompromised and immunocompetent individuals. Nocardia infections can manifest as cutaneous disease, pulmonary disease, disseminated disease, or central nervous system infections such as brain abscesses. Diagnosis involves microscopic examination of samples showing branching filaments, culture growth on selective media, and molecular techniques such as PCR and 16S rRNA sequencing. Treatment involves prolonged courses of antibiotics such as trimethoprim-sulfamethoxazole or amikacin depending on the species.
The document discusses the inducible clindamycin resistance test (D test) which is recommended to test for inducible resistance in staphylococci, streptococcus pneumoniae, and beta-hemolytic streptococci that are erythromycin resistant but clindamycin susceptible. The D test detects resistance by observing whether the zone of inhibition around a clindamycin disk is flattened near an erythromycin disk. A positive result indicates inducible resistance and that clindamycin treatment may fail in vivo due to selection of resistant mutants. The procedure and interpretation of the D test is described along with its limitations and clinical significance when evaluating clindamycin susceptibility.
Group A streptococci cause a variety of diseases including streptococcal pharyngitis, tonsillitis, impetigo, scarlet fever, pneumonia, and rarely necrotizing fasciitis and toxic shock syndrome. They are transmitted through respiratory droplets or direct contact. Complications can include acute glomerulonephritis, acute rheumatic fever, and rheumatic heart disease. Control involves proper diagnosis, antibiotic treatment, isolating infected individuals, and preventing transmission.
The document discusses the taxonomy, characteristics, and clinical significance of the family Enterobacteriaceae. It describes key genera including Citrobacter, Enterobacter, Klebsiella, and their roles as normal gut flora but also opportunistic pathogens. Klebsiella pneumoniae is highlighted as an important cause of nosocomial infections like pneumonia, meningitis, and sepsis. Laboratory identification involves culture-based methods and biochemical tests to distinguish lactose fermenters from non-fermenters. Treatment requires combination antibiotics and is guided by susceptibility testing due to rising multidrug resistance.
This document discusses Streptococcus pneumoniae (pneumococcus), including its normal habitat in the nasopharynx, morphology as gram-positive diplococci that are encapsulated, and cultural characteristics such as alpha hemolysis on blood agar. Key virulence factors include its polysaccharide capsule which inhibits phagocytosis. Pneumococcus can cause diseases like pneumonia, bacteremia, and meningitis when host immunity is compromised. Laboratory diagnosis involves gram stain morphology and testing for sensitivity to optochin to identify it as the cause of infection.
This document discusses hospital acquired infections (HAIs), also known as nosocomial infections. It defines HAIs and notes that they affect 7-10% of hospital patients. Common types of HAIs include catheter-associated urinary tract infections, central line-associated bloodstream infections, ventilator-associated pneumonia, and surgical site infections. The document discusses the microbiology, risk factors, transmission, and prevention of these major HAIs.
This document discusses antibiotics and their use in the intensive care unit (ICU). It begins by defining key terms like infection, SIRS, sepsis, severe sepsis, and septic shock. It then discusses the most common causes of infections in the ICU, including devices, nursing care, and antibiotic overuse. The most frequent infectious organisms in the ICU are noted as gram-positive bacteria like coagulase-negative staphylococci and Candida species. Factors predisposing patients to infection and approaches for diagnosis and empiric antibiotic therapy are also summarized.
Streptococcus pneumoniae, also known as pneumococcus, is a type of bacteria commonly found in the respiratory tract that can cause illnesses like pneumonia, ear infections, and sinus infections. It is a gram-positive, facultative anaerobic bacteria that is often found in pairs and does not form spores or exhibit motility. Pneumococcus bacteria are usually spread through respiratory droplets from coughing or sneezing of an infected person. Symptoms can include fever, chills, chest pain, cough, and confusion in the elderly. The infection is diagnosed by growing the bacteria from specimens and treated with antibiotics like penicillin, ampicillin, or ceftriaxone depending on the susceptibility of the strain.
This document discusses opportunistic pathogens and infections. It begins by defining an opportunistic pathogen as a microorganism that normally does not cause disease but can do so when the host's immune system is compromised. Examples of opportunistic bacteria that can cause infections in HIV/AIDS patients are provided, including Campylobacter, Flavobacterium, Pseudomonas, and Salmonella. The document also discusses two specific opportunistic pathogens in more detail: Pseudomonas aeruginosa and Escherichia coli (E. coli). It provides information on their characteristics, infections they can cause, and prevention strategies.
Blood stream infections- clinical microbiologySijo A
Blood stream infections (BSI) refers to the presence of organisms in blood which are threat to every organ in the body.
It causes shock, multiple organ failure and DIC (Disseminated Intravascular Coagulation).
The presence of bacteria in blood is called Bacteremia.
The bacteria circulate and actively multiply in the blood stream is called Septicemia.
The presence of virus in blood is called Viremia.
The presence of parasite in blood is called Parasitemia.
The presence of fungi in blood is called Fungemia.
This document discusses Streptococcus pneumoniae, a common bacterium that can cause pneumonia, meningitis, and other infections. It describes the morphology and cultural characteristics of S. pneumoniae, including that it appears as paired diplococci and forms alpha-hemolytic colonies on blood agar. It also covers the antigenic properties, virulence factors, pathogenicity, epidemiology, laboratory diagnosis, prophylaxis, and treatment of infections caused by S. pneumoniae.
This document discusses various types of bloodstream infections including bacteraemia, septicaemia, and infective endocarditis. It provides details on the causative agents, pathogenesis, clinical features, complications, diagnosis and prevention. The key points are:
- Bacteraemia refers to the presence of bacteria in the blood without multiplication, while septicaemia involves bacterial multiplication in the bloodstream.
- Common causative agents of septicaemia are gram-negative bacilli and gram-positive cocci such as Staphylococcus aureus.
- Infective endocarditis involves bacterial or fungal infection of the heart valves, with predisposing factors like rheumatic heart disease or intravenous drug
MRSA is a type of staph bacteria that has become resistant to common antibiotics used to treat staph infections. MRSA infections can range from minor to life-threatening. MRSA bacteria can live on surfaces for several days and is spread through direct contact with infected individuals or contaminated surfaces and items. Those at highest risk include individuals in crowded settings like hospitals and schools, athletes, military recruits, and people who overuse antibiotics. However, healthy individuals can also contract MRSA through community settings. MRSA has also been found in household pets.
presentation talking about streptococcus pneumonia ,identification of streptococcus pneumonia ,virulence factors of streptococcus pneumonia and mechanism of pathogenesis
Haemophilus is a genus of bacteria that includes species normally found in the human respiratory tract as well as pathogenic species. H. influenzae is the most clinically important species and is a cause of pneumonia, septic arthritis, epiglottitis, and meningitis. H. influenzae is a small, non-motile, gram-negative coccobacillus that requires both Factor X and V for growth. Serotype b of H. influenzae causes the majority of invasive disease and was an important cause of childhood meningitis prior to the introduction of the Hib vaccine.
Streptococcus pneumoniae, commonly known as pneumococcus, is a gram-positive bacterium that is a major cause of pneumonia, meningitis, and sepsis. It was first observed in 1881 and its relationship to pneumonia was established in 1886. It is a lancet-shaped diplococcus that appears in pairs and is encapsulated. Pneumococcus can be identified through its morphology, culture characteristics, and reactions like optochin sensitivity and bile solubility. It is a human pathogen that can cause diseases like pneumonia, meningitis, and sepsis. Vaccines like PCV7 for children and PPV23 for adults help prevent pneumococcal infections.
Acinetobacter is a gram-negative bacteria that was discovered in 1911. It naturally inhabits soil and water and can cause infections in humans and animals. While commonly found on healthy human skin, it can also cause serious multidrug-resistant infections, especially in hospital settings. These infections include pneumonia, bloodstream infections, meningitis, and wound or urinary tract infections. Treatment is challenging due to high rates of resistance, but may include colistin, tigecycline, carbapenems, or polymyxins depending on the infection type and susceptibility results.
This document discusses carbapenamases, which are beta-lactamase enzymes that can hydrolyze carbapenem antibiotics, rendering them ineffective. It notes that carbapenamases are an emerging problem and now represent one of the most versatile beta-lactamase families. The document summarizes the main types of carbapenamases, including KPC, NDM, VIM, and OXA. It discusses the increasing spread of resistant bacteria producing these enzymes worldwide and outlines challenges for detection and treatment. Laboratory tests for detecting carbapenamase activity like the modified Hodge test are also summarized.
This document discusses Staphylococcus, including S. aureus. It describes the morphology and cultural characteristics of S. aureus, noting it is a gram-positive coccus that grows in clusters and produces golden yellow pigment on blood agar. S. aureus can cause a variety of infections through production of enzymes and toxins. Laboratory diagnosis involves gram staining, culturing, and coagulase testing of samples. Treatment often involves cephalosporins due to high resistance of S. aureus to penicillin.
The document provides guidelines for collecting blood cultures to detect bloodstream infections. It states that blood cultures should only be collected when there is a clinical indication of sepsis based on symptoms such as fever, tachycardia, or confusion. It emphasizes the importance of following proper technique to minimize contamination, including cleaning the skin with chlorhexidine, collecting cultures through a newly inserted needle before other blood draws, and clearly labelling the sample source. The document also provides step-by-step instructions for collecting both peripheral blood cultures and cultures from central venous access devices.
Nocardia are aerobic, gram-positive bacteria that are ubiquitous environmental saprophytes found in soil. They cause opportunistic infections in both immunocompromised and immunocompetent individuals. Nocardia infections can manifest as cutaneous disease, pulmonary disease, disseminated disease, or central nervous system infections such as brain abscesses. Diagnosis involves microscopic examination of samples showing branching filaments, culture growth on selective media, and molecular techniques such as PCR and 16S rRNA sequencing. Treatment involves prolonged courses of antibiotics such as trimethoprim-sulfamethoxazole or amikacin depending on the species.
The document discusses the inducible clindamycin resistance test (D test) which is recommended to test for inducible resistance in staphylococci, streptococcus pneumoniae, and beta-hemolytic streptococci that are erythromycin resistant but clindamycin susceptible. The D test detects resistance by observing whether the zone of inhibition around a clindamycin disk is flattened near an erythromycin disk. A positive result indicates inducible resistance and that clindamycin treatment may fail in vivo due to selection of resistant mutants. The procedure and interpretation of the D test is described along with its limitations and clinical significance when evaluating clindamycin susceptibility.
Group A streptococci cause a variety of diseases including streptococcal pharyngitis, tonsillitis, impetigo, scarlet fever, pneumonia, and rarely necrotizing fasciitis and toxic shock syndrome. They are transmitted through respiratory droplets or direct contact. Complications can include acute glomerulonephritis, acute rheumatic fever, and rheumatic heart disease. Control involves proper diagnosis, antibiotic treatment, isolating infected individuals, and preventing transmission.
The document discusses the taxonomy, characteristics, and clinical significance of the family Enterobacteriaceae. It describes key genera including Citrobacter, Enterobacter, Klebsiella, and their roles as normal gut flora but also opportunistic pathogens. Klebsiella pneumoniae is highlighted as an important cause of nosocomial infections like pneumonia, meningitis, and sepsis. Laboratory identification involves culture-based methods and biochemical tests to distinguish lactose fermenters from non-fermenters. Treatment requires combination antibiotics and is guided by susceptibility testing due to rising multidrug resistance.
This document discusses Streptococcus pneumoniae (pneumococcus), including its normal habitat in the nasopharynx, morphology as gram-positive diplococci that are encapsulated, and cultural characteristics such as alpha hemolysis on blood agar. Key virulence factors include its polysaccharide capsule which inhibits phagocytosis. Pneumococcus can cause diseases like pneumonia, bacteremia, and meningitis when host immunity is compromised. Laboratory diagnosis involves gram stain morphology and testing for sensitivity to optochin to identify it as the cause of infection.
This document discusses hospital acquired infections (HAIs), also known as nosocomial infections. It defines HAIs and notes that they affect 7-10% of hospital patients. Common types of HAIs include catheter-associated urinary tract infections, central line-associated bloodstream infections, ventilator-associated pneumonia, and surgical site infections. The document discusses the microbiology, risk factors, transmission, and prevention of these major HAIs.
This document discusses antibiotics and their use in the intensive care unit (ICU). It begins by defining key terms like infection, SIRS, sepsis, severe sepsis, and septic shock. It then discusses the most common causes of infections in the ICU, including devices, nursing care, and antibiotic overuse. The most frequent infectious organisms in the ICU are noted as gram-positive bacteria like coagulase-negative staphylococci and Candida species. Factors predisposing patients to infection and approaches for diagnosis and empiric antibiotic therapy are also summarized.
Hospital acquired infections and their survival rateHafsaQasim1
This document discusses various types of hospital acquired infections, including their causes, symptoms, treatments and survival trends. It covers bloodstream infections, ventilator-associated pneumonia, surgical site infections, and catheter-associated urinary tract infections. The document indicates that hospital acquired infections are a major public health issue, though incidence and mortality rates have decreased in recent years due to improved treatment and prevention efforts.
Infection Control In Health Care SettingsSagar Desai
The goal of this report was to assess the current and potential future role of diagnostics in hospital-acquired infection (HAI) control programs. We examined current issues resulting from HAIs and determined which infections needed foremost attention. Then, with input from Prof. Neimz, we selected diagnostics available on the market we could use. The final chapter of the review contains a market analysis with info about costs prevented upon implementation of diagnostic recommendations.
Infective endocarditis is an infection of the inner lining of the heart chambers and heart valves. It has varying presentations from subacute to acute. Diagnosis involves blood cultures, echocardiography, and clinical criteria. Common causes are bacteria like streptococci and staphylococci. Complications include heart failure, embolic events, and kidney or brain infections. Treatment involves prolonged antibiotics and sometimes surgery.
Basic description of Infective Endocarditis from a Clinical and Microbiological point of view with description on Pathogenesis, Clinical Manifestations, Clinical and Laboratory diagnosis.
This document discusses infectious arthritis and osteomyelitis, including causative pathogens and laboratory diagnostics. It describes how acute bacterial arthritis is usually caused by Staphylococcus aureus or Streptococcus and can result from hematogenous spread or direct inoculation. Acute viral arthritis causes polyarticular symptoms along with systemic viral infection, often due to parvovirus B19, rubella virus, or hepatitis. Synovial fluid analysis examines cell count and presence of crystals or microbes. Osteomyelitis definitions, classifications, and typical pathogens are provided, noting Staphylococcus aureus as a common cause. Diagnostic tests and treatment approaches are outlined for different clinical scenarios of osteomyelitis.
nosocomial infection are those healthcare associated infection which a patient can get during hospitalization . a majority of these infections are preventable . as these infections pose a very delitirious affect on the patient recovery and also increases the financial burden. each and every paramedical and medical professional is expected to be aware about prevention and control of nosocomial infection.
Viruses can infect host cells and take over their synthetic mechanisms, replicating inside the host cell. A typical virus has a protein coat that protects its nucleic acid core and enables it to recognize and penetrate host cells. Once inside, the virus' genetic material directs the host cell to produce new virus particles. Viruses cause disease through direct attack of infected cells by the immune system, immune complex formation, immunosuppression, disruption of host cell nucleic acid, and interference with host cell functions. Common pathogenic viruses in humans include adenoviruses, hepatitis B virus, herpesviruses like cytomegalovirus and Epstein-Barr virus, and varicella-zoster virus which causes chickenpox
Hospital-acquired infections, also called nosocomial infections, are infections that patients acquire during a hospital stay that were not present or incubating upon admission. The most common types are urinary tract infections, pneumonia, and surgical site infections, which can be caused by bacteria, viruses, fungi or parasites. Patients are at greater risk if they have prolonged hospital stays, underlying illnesses, use of invasive devices like catheters, or have procedures done that expose them to bacteria. Hospitals work to prevent infections through hand washing, sterile technique, and disinfecting medical equipment.
This document discusses hospital acquired infections (HAIs), also known as nosocomial infections. It provides information on the epidemiology, risk factors, commonly implicated organisms, and infection prevention and control measures for HAIs. It notes that HAIs occur in about 8.7% of hospital patients on average globally, though rates are higher in developing countries. Common types of HAIs include urinary tract infections, ventilator-associated pneumonia, and surgical site infections. Methicillin-resistant Staphylococcus aureus and other drug-resistant organisms are significant causes of HAIs. The document outlines transmission routes and precautions healthcare workers should take like hand hygiene to prevent the spread of HAIs.
This document provides information on approaching and evaluating patients with potential infectious diseases. It discusses taking an exposure and social history, performing a physical exam focusing on vital signs, lymph nodes, skin, and foreign bodies. Diagnostic testing options are outlined including lab tests, imaging, and pathogen-specific tests. Empirical antibiotic therapy is recommended for common infections like pneumonia based on presentation. Community-acquired pneumonia causes are discussed. Hospital-acquired pneumonia treatment typically involves antibiotics until culture results are available. Infective endocarditis typically involves bacterial vegetation on heart valves.
Healthcare-associated infections (HAIs) are infections acquired during medical care. The document discusses the etiology, epidemiology, clinical presentation, diagnosis, and management of HAIs. The three main types are bloodstream infections, pneumonia, and urinary tract infections. Risk factors include underlying illness, invasive devices like ventilators or catheters, and prolonged hospital stays. Diagnosis involves cultures of infected sites and imaging when needed. Treatment involves removing unnecessary devices, giving empiric antibiotics, and later streamlining based on culture results. Management also requires addressing any complications.
Hospital acquired infections, also known as nosocomial infections, are infections that patients acquire during the course of receiving treatment for other conditions within hospitals. Risk factors for hospital acquired infections can be iatrogenic (related to medical procedures), organizational (related to facility conditions), or patient-related (underlying illness/immunocompromised state). Common types include urinary tract infections, pneumonia, bloodstream infections, and surgical site infections. Diagnosis involves physical exams, cultures, and imaging tests. Treatment involves removing any invasive devices if possible, empiric use of broad-spectrum antibiotics/antifungals/antivirals, and consulting infectious disease specialists if needed. Preventing the spread of infections within hospitals remains an important
This document provides information on urinary tract infections (UTIs). It discusses the epidemiology and risk factors of UTIs, presentations of UTIs including acute pyelonephritis and kidney infections, methods for diagnosing UTIs, complications such as renal abscesses, and treatments for both acute and chronic UTIs. The document covers causative pathogens, host defenses against UTIs, methods of bacterial entry and pathogenesis, and imaging techniques for diagnosing kidney infections and complications.
This document discusses diarrhea in HIV-infected patients. It notes that diarrhea can be caused by infectious agents like Cryptosporidium, as well as non-infectious conditions like HIV enteropathy. A thorough history, physical exam, and stool/endoscopy tests are needed to determine the etiology. Treatments depend on the identified cause, but may include antiretroviral medication changes, antimotility drugs, or zinc supplementation.
Healthcare-associated infections (HAIs) are infections acquired during healthcare and can be caused by opportunistic pathogens. The document discusses various HAIs like bloodstream infections, pneumonia, surgical site infections, and diarrhoea. It outlines the common causative pathogens for each infection. A group of pathogens called ESKAPE pathogens are frequently antibiotic-resistant and include Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter species. The document provides details on each of the ESKAPE pathogens and risks factors for acquiring HAIs. Prevention of HAIs is key and includes practices like hand hygiene, prudent antibiotic use
In this presentation, we delve into the realm of opportunistic gastrointestinal pathogens, shedding light on the often underestimated threats they pose to human health. These microorganisms, while typically harmless in healthy individuals, can turn perilous in situations where the host's immune system is compromised or when environmental conditions become conducive to their proliferation. We will explore the factors that render individuals susceptible to these infections, ranging from immunosuppression to suboptimal hygiene practices. By understanding the key players in opportunistic infections, including notorious culprits like Clostridium difficile, Candida species, Norovirus, and Giardia, we aim to equip our audience with valuable insights for prevention and management strategies. Join us in this journey as we unmask the covert adversaries within our gastrointestinal tract.
19. presenting problems in infectious diseasesAhmad Hamadi
This document discusses the evaluation and management of fever. It notes that the differential diagnosis for fever is broad and initial screening investigations should include blood tests, imaging, and cultures of potential sites of infection depending on symptoms. For patients where the cause is not obvious, further targeted investigations are needed. The document also discusses considerations for evaluating fever in people who inject drugs, including risks related to injection practices and common infections in this population.
Similar to Laboratory diagnosis of Blood Stream Infections (BSIs) (20)
A detailed description of HIV covering virology, morphology, pathogenesis, clinical stages and manifestations, laboratory diagnosis, and diagnostic strategy, and therapeutic options and prevention.
Basic discussion on Coccidian parasites with a focus on Cryptosporidiosis -morphology, life cycle, pathogenesis, clinical manifestations, and laboratory diagnosis and management.
E. histolytica causes a range of diseases in humans. It can cause asymptomatic intestinal infection or symptomatic amebic colitis characterized by diarrhea, abdominal cramps and pain. Rarely, it can cause a severe, fulminant colitis with toxic megacolon. It is also known to cause amebic liver abscess when trophozoites spread from the intestine to the liver via the portal vein. E. histolytica exhibits a complex life cycle alternating between the infective cyst form and the invasive trophozoite form.
Basic discussion on Clinical and Microbiological Aspects of Food Poisoning caused by various bacteria, viruses, protozoa, and Fungi along with their clinical and laboratory diagnosis and basic management.
Leptospira are thin, spiral-shaped bacteria that can cause leptospirosis, a zoonotic disease. They have two flagella that allow for motility. Leptospirosis is transmitted through contact with urine from infected animals. It has varied clinical manifestations from mild flu-like symptoms to severe jaundice, kidney damage, and hemorrhaging known as Weil's disease. Diagnosis is made through microscopic agglutination testing of antibodies in serum. Proper treatment requires antibiotics.
Basic description of Lyme disease from Microbiological and Clinical point of view with discussion on Pathology, Clinical Features and, Laboratory Diagnosis.
This document provides an overview of Leishmaniasis, caused by protozoan parasites of the genus Leishmania. It discusses the life cycle of Leishmania donovani, the causative agent of visceral leishmaniasis (VL) or kala-azar. L. donovani has two forms - the amastigote form found within macrophages in humans and other mammals, and the promastigote form found in the sandfly vector. The sandfly transmits L. donovani between humans during feeding. In humans, L. donovani infects the reticuloendothelial system causing enlargement of the spleen, liver and bone marrow. Clinical features of VL include
Detailed description of malarial parasites especially P. falciparum with regards to their Morphology, Life cycle, Pathogenesis, Epidemiology, Clinical manifestations and complications and Laboratory diagnosis including modern methods and treatment.
This document discusses lymphatic filariasis, caused by parasitic roundworms transmitted by mosquitoes. It provides details on the life cycle and morphology of the parasites. Clinical manifestations range from asymptomatic microfilaremia to acute adenolymphangitis and chronic manifestations like lymphedema and elephantiasis. Pathogenesis involves blockage of lymph vessels by adult worms and inflammatory responses. Diagnosis is via blood smears to detect microfilariae and treatment aims to eliminate parasites and control symptoms.
The Gram staining method was developed in 1884 by Hans Christian Gram to differentiate between bacteria in tissue samples. It uses crystal violet dye followed by iodine and decolorizing agents to stain bacteria either purple (Gram-positive) or red (Gram-negative) based on their cell wall structure. Gram-positive bacteria have a thick peptidoglycan layer that retains the crystal violet dye, while Gram-negative bacteria have a thin peptidoglycan layer and stain red. The Gram stain remains a fundamental method for phenotypic characterization of bacteria.
The document discusses the Gram staining technique, which was invented by Hans Christian Gram in 1884. It is a differential staining method that divides bacteria into two groups - Gram positive and Gram negative - based on differences in their cell wall composition that are revealed through a multi-step staining process using dyes. The Gram stain results provide important initial clues about an organism that can guide further diagnostic tests and treatment decisions.
Describes the basic properties and mechanisms of T cells and B cells in maintaining Immune Response against foreign antigens or infections and covers the UG and PG portion of immunology.
Biochemical tests for bacterial identificationSuprakash Das
Basic biochemical tests for identification of most common bacteria along with their principles and methods to perform and quality control for UG & PG Students.
Summer is a time for fun in the sun, but the heat and humidity can also wreak havoc on your skin. From itchy rashes to unwanted pigmentation, several skin conditions become more prevalent during these warmer months.
5-hydroxytryptamine or 5-HT or Serotonin is a neurotransmitter that serves a range of roles in the human body. It is sometimes referred to as the happy chemical since it promotes overall well-being and happiness.
It is mostly found in the brain, intestines, and blood platelets.
5-HT is utilised to transport messages between nerve cells, is known to be involved in smooth muscle contraction, and adds to overall well-being and pleasure, among other benefits. 5-HT regulates the body's sleep-wake cycles and internal clock by acting as a precursor to melatonin.
It is hypothesised to regulate hunger, emotions, motor, cognitive, and autonomic processes.
Discover the benefits of homeopathic medicine for irregular periods with our guide on 5 common remedies. Learn how these natural treatments can help regulate menstrual cycles and improve overall menstrual health.
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Are you looking for a long-lasting solution to your missing tooth?
Dental implants are the most common type of method for replacing the missing tooth. Unlike dentures or bridges, implants are surgically placed in the jawbone. In layman’s terms, a dental implant is similar to the natural root of the tooth. It offers a stable foundation for the artificial tooth giving it the look, feel, and function similar to the natural tooth.
- Video recording of this lecture in English language: https://youtu.be/Pt1nA32sdHQ
- Video recording of this lecture in Arabic language: https://youtu.be/uFdc9F0rlP0
- Link to download the book free: https://nephrotube.blogspot.com/p/nephrotube-nephrology-books.html
- Link to NephroTube website: www.NephroTube.com
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Histololgy of Female Reproductive System.pptxAyeshaZaid1
Dive into an in-depth exploration of the histological structure of female reproductive system with this comprehensive lecture. Presented by Dr. Ayesha Irfan, Assistant Professor of Anatomy, this presentation covers the Gross anatomy and functional histology of the female reproductive organs. Ideal for students, educators, and anyone interested in medical science, this lecture provides clear explanations, detailed diagrams, and valuable insights into female reproductive system. Enhance your knowledge and understanding of this essential aspect of human biology.
Breast cancer: Post menopausal endocrine therapyDr. Sumit KUMAR
Breast cancer in postmenopausal women with hormone receptor-positive (HR+) status is a common and complex condition that necessitates a multifaceted approach to management. HR+ breast cancer means that the cancer cells grow in response to hormones such as estrogen and progesterone. This subtype is prevalent among postmenopausal women and typically exhibits a more indolent course compared to other forms of breast cancer, which allows for a variety of treatment options.
Diagnosis and Staging
The diagnosis of HR+ breast cancer begins with clinical evaluation, imaging, and biopsy. Imaging modalities such as mammography, ultrasound, and MRI help in assessing the extent of the disease. Histopathological examination and immunohistochemical staining of the biopsy sample confirm the diagnosis and hormone receptor status by identifying the presence of estrogen receptors (ER) and progesterone receptors (PR) on the tumor cells.
Staging involves determining the size of the tumor (T), the involvement of regional lymph nodes (N), and the presence of distant metastasis (M). The American Joint Committee on Cancer (AJCC) staging system is commonly used. Accurate staging is critical as it guides treatment decisions.
Treatment Options
Endocrine Therapy
Endocrine therapy is the cornerstone of treatment for HR+ breast cancer in postmenopausal women. The primary goal is to reduce the levels of estrogen or block its effects on cancer cells. Commonly used agents include:
Selective Estrogen Receptor Modulators (SERMs): Tamoxifen is a SERM that binds to estrogen receptors, blocking estrogen from stimulating breast cancer cells. It is effective but may have side effects such as increased risk of endometrial cancer and thromboembolic events.
Aromatase Inhibitors (AIs): These drugs, including anastrozole, letrozole, and exemestane, lower estrogen levels by inhibiting the aromatase enzyme, which converts androgens to estrogen in peripheral tissues. AIs are generally preferred in postmenopausal women due to their efficacy and safety profile compared to tamoxifen.
Selective Estrogen Receptor Downregulators (SERDs): Fulvestrant is a SERD that degrades estrogen receptors and is used in cases where resistance to other endocrine therapies develops.
Combination Therapies
Combining endocrine therapy with other treatments enhances efficacy. Examples include:
Endocrine Therapy with CDK4/6 Inhibitors: Palbociclib, ribociclib, and abemaciclib are CDK4/6 inhibitors that, when combined with endocrine therapy, significantly improve progression-free survival in advanced HR+ breast cancer.
Endocrine Therapy with mTOR Inhibitors: Everolimus, an mTOR inhibitor, can be added to endocrine therapy for patients who have developed resistance to aromatase inhibitors.
Chemotherapy
Chemotherapy is generally reserved for patients with high-risk features, such as large tumor size, high-grade histology, or extensive lymph node involvement. Regimens often include anthracyclines and taxanes.
Pictorial and detailed description of patellar instability with sign and symptoms and how to diagnose , what investigations you should go with and how to approach with treatment options . I have presented this slide in my 2nd year junior residency in orthopedics at LLRM medical college Meerut and got good reviews for it
After getting it read you will definitely understand the topic.
These lecture slides, by Dr Sidra Arshad, offer a simplified look into the mechanisms involved in the regulation of respiration:
Learning objectives:
1. Describe the organisation of respiratory center
2. Describe the nervous control of inspiration and respiratory rhythm
3. Describe the functions of the dorsal and respiratory groups of neurons
4. Describe the influences of the Pneumotaxic and Apneustic centers
5. Explain the role of Hering-Breur inflation reflex in regulation of inspiration
6. Explain the role of central chemoreceptors in regulation of respiration
7. Explain the role of peripheral chemoreceptors in regulation of respiration
8. Explain the regulation of respiration during exercise
9. Integrate the respiratory regulatory mechanisms
10. Describe the Cheyne-Stokes breathing
Study Resources:
1. Chapter 42, Guyton and Hall Textbook of Medical Physiology, 14th edition
2. Chapter 36, Ganong’s Review of Medical Physiology, 26th edition
3. Chapter 13, Human Physiology by Lauralee Sherwood, 9th edition
Osvaldo Bernardo Muchanga-GASTROINTESTINAL INFECTIONS AND GASTRITIS-2024.pdfOsvaldo Bernardo Muchanga
GASTROINTESTINAL INFECTIONS AND GASTRITIS
Osvaldo Bernardo Muchanga
Gastrointestinal Infections
GASTROINTESTINAL INFECTIONS result from the ingestion of pathogens that cause infections at the level of this tract, generally being transmitted by food, water and hands contaminated by microorganisms such as E. coli, Salmonella, Shigella, Vibrio cholerae, Campylobacter, Staphylococcus, Rotavirus among others that are generally contained in feces, thus configuring a FECAL-ORAL type of transmission.
Among the factors that lead to the occurrence of gastrointestinal infections are the hygienic and sanitary deficiencies that characterize our markets and other places where raw or cooked food is sold, poor environmental sanitation in communities, deficiencies in water treatment (or in the process of its plumbing), risky hygienic-sanitary habits (not washing hands after major and/or minor needs), among others.
These are generally consequences (signs and symptoms) resulting from gastrointestinal infections: diarrhea, vomiting, fever and malaise, among others.
The treatment consists of replacing lost liquids and electrolytes (drinking drinking water and other recommended liquids, including consumption of juicy fruits such as papayas, apples, pears, among others that contain water in their composition).
To prevent this, it is necessary to promote health education, improve the hygienic-sanitary conditions of markets and communities in general as a way of promoting, preserving and prolonging PUBLIC HEALTH.
Gastritis and Gastric Health
Gastric Health is one of the most relevant concerns in human health, with gastrointestinal infections being among the main illnesses that affect humans.
Among gastric problems, we have GASTRITIS AND GASTRIC ULCERS as the main public health problems. Gastritis and gastric ulcers normally result from inflammation and corrosion of the walls of the stomach (gastric mucosa) and are generally associated (caused) by the bacterium Helicobacter pylor, which, according to the literature, this bacterium settles on these walls (of the stomach) and starts to release urease that ends up altering the normal pH of the stomach (acid), which leads to inflammation and corrosion of the mucous membranes and consequent gastritis or ulcers, respectively.
In addition to bacterial infections, gastritis and gastric ulcers are associated with several factors, with emphasis on prolonged fasting, chemical substances including drugs, alcohol, foods with strong seasonings including chilli, which ends up causing inflammation of the stomach walls and/or corrosion. of the same, resulting in the appearance of wounds and consequent gastritis or ulcers, respectively.
Among patients with gastritis and/or ulcers, one of the dilemmas is associated with the foods to consume in order to minimize the sensation of pain and discomfort.
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2. Introduction True/Pseudo?
The presence of viable bacteria in the blood, as determined by their growth
in a blood culture, is known as bacteremia.
It is a laboratory finding that may or may not indicate infection.
Blood cultures may become positive because of contamination during
phlebotomy, leading to false-positive results, a phenomenon termed
pseudobacteremia.
Such contamination is most often caused by skin commensals, such as
coagulase-negative staphylococci (CoNS).
Pseudobacteremia is not an indication of infection and does not require
therapy.
Although bacteremia may be a transient, self limiting phenomenon without
clinical consequences, it frequently reflects the presence of serious
infection.
3. Introduction True/Pseudo?
Growth of CoNS or other skin microbiota from a blood culture does not
always represent pseudobacteremia however; it may indicate true
bacteremia, depending on the clinical situation
Life-threatening infections caused by bacteremia are a concern in patients
who are immunocompromised through drug or chemotherapeutic
intervention or as the result of pre-existing disease and subsequent
immunosuppression.
Bacteremia is often associated with
Hospitalization,
Insertion of foreign bodies, such as catheters, into blood vessels,
Other types of procedures.
4. Introduction True/Pseudo?
Even when growth of an organism from a blood culture reflects a true-
positive result, bacteremia may not be associated with any physical signs
or symptoms of severe infection, a condition known as Occult
(unsuspected) bacteremia.
Occult bacteremia frequently occurs in children less than 2 years of age
and is most often caused by Streptococcus pneumoniae.
Because of the lack of clinical evidence for serious infection in such
patients, the diagnosis of bacteremia may be overlooked, with potentially
catastrophic consequences if treatment is delayed.
Usually, however, bacteremia that reflects true infection results in systemic
physiologic responses that indicate the presence of a serious infection.
5. Introduction Newer Definitions
In the past, the term Septicemia was used to indicate bacteremia plus a clinical
presentation of physical signs and symptoms of bacterial invasion and toxin
production.
The term septicemia is still used clinically and in the collection of epidemiologic
data on causes of death.
Because of its imprecision in defining a disease state, however, it is not suitable
for categorizing all patients who have bacteremia-related infections or for
designing clinical trials.
To facilitate the study of the pathogenesis and treatment of the consequences of
severe infections, including those associated with bacteremia,
An international consensus conference of the American College of Chest
Physicians and the Society of Critical Care Medicine devised standardized
definitions of the response to infection.
6.
7. Classification of Bacteremia
Site of Origin
Primary bacteremia occurs when the bacteria are present in an endovascular source such
as an infected cardiac valve or an infected intravenous (IV) catheter, whereas
Secondary bacteremia occurs when the bacteria come from an infected extravascular
source, such as lungs in patients with pneumonia.
A case in which the source of bacteremia remains undefined is termed bacteremia of
unknown origin.
Classification in this manner has important clinical consequences because it determines
the appropriate therapy and prognosis.
For example, a secondary bacteremia from an infected focus, such as an abscess, may
require surgical therapy to remove the abscess or source of infection, in addition to
antimicrobials to eliminate the infection.
Bacteremia of unknown origin generally has a poorer prognosis than primary or
secondary bacteremia.
8. Classification of Bacteremia
Causative Agent
Categorized by the general class of microorganism or specific pathogen that has
invaded the bloodstream.
Gram-positive bacteremia is caused by such organisms as
S. pneumoniae,
Staphylococcus aureus, or
Enterococcus faecium, whereas
Gram-negative bacteremia is caused by such organisms as
Escherichia coli or
Pseudomonas aeruginosa.
Anaerobic bacteremia is caused by such organisms as Bacteroides fragilis, whereas
Polymicrobial bacteremia is caused by a mixture of organisms.
9. Classification of Bacteremia
General classification of bacteremia in this fashion can provide initial clues to the underlying
source of a bacteremia and guide therapy, even before organisms have been identified.
For example, CoNS bacteremia in a hospitalized patient is frequently caused by infection of an
indwelling vascular device, whereas
Polymicrobial bacteremia with a mixture of enterococci and gram-negative organisms is
frequently caused by invasion of the bloodstream by gastrointestinal (GI) microbiota from
bowel perforation.
Place of Acquisition
Community-acquired bacteremia, as the term suggests, occurs in individuals living in the
general community, whereas
Nosocomial bacteremia (“nosocomial” meaning hospital acquired) occurs in patients who are
hospitalized or living in a nursing home or other health care facility.
Nosocomial bacteremia is conventionally defined as any bacteremia occurring more than 72
hours after hospital admission.
10. Classification of Bacteremia
Certain bacteremias are more often community acquired. For example,
more than 90% of cases of S. pneumoniae bacteremia are acquired in the
community.
Others, such as those caused by P. aeruginosa or Enterococcus spp., are
more likely to be nosocomial.
The place of acquisition may thus be extremely significant in guiding initial
therapy.
For example, nosocomial bacteremia is more likely to be caused by drug
resistant organisms that express β-lactamases or other resistance factors that
inactivate first-line antimicrobial agents,
Although this distinction is currently blurred in the case of hospital-acquired
and community-acquired methicillin-resistant Staphylococcus aureus
(MRSA).
11. Classification of Bacteremia
Duration
Bacteremia may also be classified by the duration of a bacteremic episode.
Bacteremic episodes may be transient, intermittent, or continuous.
The frequency, time, and number of blood cultures to be collected may depend on
the type of bacteremic episode that the patient is experiencing.
Transient bacteremia usually occurs after a procedural manipulation of a
specific body site colonized by indigenous microbiota, causing the organisms to
enter blood.
Such sites include the mouth and the GI and urogenital tracts.
Transient bacteremia may appear for a brief period following a dental,
colonoscopic, or cystoscopic procedure.
The organisms involved are normally rapidly cleared by the host immune defense,
so their presence is rarely symptomatic.
12. Classification of Bacteremia
Intermittent bacteremia can occur because of the presence of abscesses
somewhere in the body or as a clinical manifestation of certain types of infections,
such as meningococcemia, gonococcemia, or pneumonia.
In intermittent bacteremia, organisms are periodically released from the primary
site of infection into blood.
Continuous bacteremia occurs when the organisms are coming from an
intravascular source and are consistently present in the bloodstream.
Infective endocarditis is the most common clinical manifestation associated
with continuous bacteremia, although other endovascular sources, such as
infected intravascular catheters or septic thrombi, can also result in continuous
bacteremia.
Microbial biofilms on foreign body implants and in tissue can contribute to
continuous bacteremia by the periodic release of planktonic microorganisms.
15. Microorganism profile of short-term
peripheral venous
catheter-associated bloodstream infections
16.
17.
18. Risk Factors for Bacteremia
Decreased Immune Competency of Selected Patient Populations
Bacteremias are more frequent among persons with neoplasia
especially those with Hematologic Malignancies,
those receiving Immunosuppressive Chemotherapy, and
those undergoing Bone Marrow Transplantations.
Persons with other chronic underlying diseases (e.g., Diabetes, Cirrhosis) and
Those receiving immunosuppressive therapy for
Rheumatoid arthritis,
Stem cell or solid organ transplant recipients
Infection with human immunodeficiency virus (HIV) predisposes patients to
increased risk of bacteremias because of the immunosuppression caused by the
virus.
19. Risk Factors for Bacteremia
Increased Use of Invasive Procedures
The increased use of
indwelling devices,
respirators, and
invasive diagnostic procedures may be a factor in the occurrence of bacteremia.
Semi-permanent vascular catheters ( for chemotherapy or, hemodialysis) increases the risk of
bacteremia.
Indwelling urethral catheters,
suprapubic catheters, and
IV pyelography also predispose patients.
Surgery involving the
Urinary,
GI, and biliary tracts may also result in bacteremia
20. Risk Factors for Bacteremia
Age of the Patient
Bacteremias are more prevalent in people at the extremes of age
Infants,
Young children, and
Adults older than 55 years being most susceptible.
The presence of comorbid conditions, such as
Diabetes,
Hypertension,
Chronic obstructive pulmonary disease, and
Congestive heart failure in older adults, and
Neoplastic disorders,
HIV infection, and
Low and very low birth weights in neonates and infants
21. Risk Factors for Bacteremia
Antimicrobial Resistance
The indiscriminate administration of broad-spectrum antimicrobials reduces susceptible
normal microbiota and favors colonization and invasion by resistant bacteria.
Data from the SENTRY Antimicrobial Surveillance Program revealed that, on average,
58% of S. aureus isolates in the United States were resistant to methicillin (oxacillin),
30% of Enterococcus isolates were resistant to vancomycin,
19.5% of Klebsiella spp. were extended-spectrum β-lactamase (ESBL) producers, and
19% of E. coli isolates were resistant to ciprofloxacin. These percentages vary widely
from region to region.
An increasing population of antimicrobial-resistant organisms results in bacteremias that
are harder to treat, leading to increased morbidity and mortality.
22.
23. Pathogenesis
The pathogenesis of bacteremia depends
Infecting pathogen,
Portal of initial entry, and
Immune status of the patient.
Bacteremia occurs because of disruption of normal skin or mucosal
barriers bacterial invasion of the bloodstream. Such disruption may occur
because of
Trauma,
Burns, or
Ischemia giving rise to breaks in the skin that allow access to the
microvasculature;
24. Pathogenesis
Viral infection disrupts the epithelial lining (e.g., influenza virus infection involving the upper
respiratory tract) resident biota to invade the bloodstream via capillaries.
Iatrogenic disruptions surgery, instrumentation, or placement of an indwelling device.
Focal bacterial infection (e.g., bacterial pneumonia)tissue destruction disrupts nearby
vascular structures and allows bloodstream invasion.
Once bacteremia occurs, the patient’s immune system attempts to control infection via
antibodies opsonize organisms activate complement-mediated killing and by phagocytosis.
In addition, filtering mechanisms in the lymphatics and large vascular beds in the liver and spleen
may sequester organisms and facilitate their destruction by phagocytic cells.
If, however, these defences are unsuccessful
Two major complications may ensue METASTATIC INFECTION
SEPTIC SHOCK
25. Pathogenesis
Invasion of the bloodstream may result in spread of organisms throughout the body, causing
seeding of multiple sites and leading to widely disseminated infection.
Bacteremia caused by S. pneumoniae Pneumococcal meningitis,
Other infections associated with a period of bacteremia as part of the disease process include
Salmonellosis,
Infective endocarditis, and
Acute hematogenous osteomyelitis.
S. aureus bacteremia is particularly likely to cause metastatic infection or abscess formation
Endocarditis,
Osteomyelitis,
Septic arthritis,
Hepatic abscess, or pyomyositis.
Sepsis and septic shock are also potential consequences of bacteremia.
26. Pathogenesis
Although gram-negative bacteremias were once thought to be more likely to cause septic
shock than bacteremias caused by gram-positive organisms, the risk of sepsis, severe
sepsis, septic shock, and death is now known to be similar between these two classes of
bacteremia.
In both cases, a bacterial membrane component
Lipopolysaccharide [LPS], also known as endotoxin, in gram-negative organisms;
Lipoteichoic acid and peptidoglycan in gram-positive organisms) interacts with
macrophages and causes the release of
Tumor necrosis factor,
Interleukin (IL)-1,
IL-6, and other proinflammatory cytokines
Increasing endothelial activation,
Vascular permeability, blood flow, and recruitment of neutrophils.
27. Pathogenesis
These responses are directed at controlling infection and are normally
counter regulated by anti-inflammatory mediators to prevent a destructive
systemic inflammatory reaction.
In sepsis and septic shock, however, an imbalance in regulation leads to an
unopposed proinflammatory state, leading to microvascular abnormalities
and endothelial injury; in turn,
These derangements lead to
Decreased tissue perfusion,
Complement activation, and
Disseminated intravascular coagulation (DIC) multiorgan dysfunction
septic shock and death.
28. The complex interactions
between the invading
microorganism and the
host defense mechanism
ending in bacteremia.
These interactions present
some unique features in
pathogenesis and they
are under the influence of
the genetic make-up of the
host.
SNPs- Single Nucleotide
Polymorphism
29.
30. Pathogenesis
Central phenomena in sepsis pathogenesis.
Pattern recognition receptors (PRRs)
Toll-like receptors,
Nucleotideoligomerization domain leucine-rich repeat proteins) initiate
intracellular signaling after binding to
Pathogen-associated molecular patterns (PAMPs) and
Danger-associated molecular patterns (DAMPs)(i.e. hyaluran, high mobility
group box-1 (HMGB-1), heat shock protein).
PRRs, expressed by macrophages, neutrophils, dendritic cells activate
intracellular transduction pathways, i.e. via nuclear factor kappa (NF- kb).
31. Pathogenesis
Activated NF- kb moves from the cell cytoplasm to the nucleus, binds to transcription
sites induces activation of an array of genes for
Acute-phase proteins,
Proinflammatory cytokines,
Inducible nitric oxide synthase (iNOS),
Coagulation factors, and
Enzymatic activation of cellular proteases.
Once activated, the innate immune system initiates the inflammatory response by
Secreting cytokines and chemokines,
Inducing the expression of costimulatory molecules in order to recruit immune cells to the
site of infection
Trigger the adaptive immune response.
32. Pathogenesis
The magnitude of clinical sepsis syndrome results from complex
interactions between the microbe and the host response to it.
A sustained response leads to organ damage.
Immunoparalysis is associated with the release of anti-inflmmatory
cytokines, lymphocyte apoptosis, decreased antigen presentation, T cell
function and immunosuppression.
Although proinflammation (T helper 1-driven response with the release of
proinflammatory cytokines) has been thought to precede
Anti-inflammation (T helper 2-driven response with the release of anti-
inflammatory cytokines), the timing of these events is not well established.
33. Syndromes Associated
with Bacteremia
Catheter-Related Bloodstream Infections (CRBSIs)
Intravascular catheters have become indispensable for modern medical and
surgical therapy
Short-term use in the administration of medications and fluids.
Semi-permanent catheters administer chemotherapy and/or parenteral nutrition
Hemodialysis in patients with end-stage renal disease.
Catheters are placed in the pulmonary artery or right-sided chambers of the
heart Hemodynamic monitoring.
Colonization and Biofilm formation CoNS, S. aureus, and Enterococcus
(Frequently MDR Strains), which are often found on the surface of the patient’s
skin bacteremia.
Substantial progress has been made in the last 15 years, however, in reducing
these infections: CDC data revealed a 58% reduction since 2001.
34. Syndromes Associated
with Bacteremia
At least 50% of these infections are caused by CoNS.
Production of a polysaccharide biofilm by CoNS is one mechanism that has been
associated with CRBSIpatients with compromised immune systems (e.g.,
patients with cancer becoming neutropenic through chemotherapy) Mortality
rates of 13% to 18%.
Bacteremias caused by S. aureus are associated with higher mortality rates.
Infusion-associated bacteremias Typically gram-negative organisms, such as
P. aeruginosa
Enterobacter cloacae.
Nontuberculous mycobacteria Intravascular catheters Immunosuppressed
hosts, most notably Mycobacterium avium complex in HIV-positive individuals.
35. Syndromes Associated
with Bacteremia
Urinary Tract Infections
Infection of the upper urinary tract (acute pyelonephritis)bacteremia in as many
as 40% of affected patients.
E. coli is the most common cause most common in older patients.
Pneumonias
Pneumonia that produce a concurrent bacteremia include
S. pneumoniae,
S. aureus,
P. aeruginosa, and
Klebsiella/Enterobacter spp.
Of patients with pneumococcal pneumonia, 20% to 25% will have positive blood
cultures; the risk of death is 20% to 30%.
36. Syndromes Associated
with Bacteremia
Intraabdominal Infections
Primary peritonitis, which frequently occurs in patients with cirrhosis, is associated with
bacteremia in 75% of cases involving aerobic bacteria.
Common pathogens include
E. coli,
K. pneumoniae, and
Enterococci.
Secondary peritonitis Perforation of the GI tract intraabdominal abscesses Intermittent
bacteremia caused by E. coli, anaerobes, and enterococci.
Skin Infections
Cellulitis
S. aureus,
Streptococcus pyogenes, or Streptococcus agalactiae
37. Syndromes Associated
with Bacteremia
Bedridden patients (bed sores) or peripheral vascular disease from diabetes Polymicrobial
bacteremia.
Proteus mirabilis,
E. coli,
S. aureus,
B. fragilis,
Pseudomonas spp.,
Clostridium spp., and
Peptostreptococcus.
Patients with severe burns
P. aeruginosa
Klebsiella pneumoniae.
38. Syndromes Associated
with Bacteremia
Infective Endocarditis
Organisms associated with acute, sudden-onset endocarditis include virulent
bacteria
S. aureus,
Enterococci, and
S. pneumoniae,
Slowly progressing subacute endocarditis
Viridans streptococci;
Nutritionally variant streptococci, including Abiotrophia and
Granulicatella
CoNS (particularly in prosthetic heart valves).
39.
40. Syndromes Associated
with Bacteremia
Musculoskeletal Infections
Acute osteomyelitis Transient bacteremia caused by S. aureus.
The organisms seed end loop capillaries in bone, where blood flow is slow,
and begin to multiply Intermittent bacteremia in about 50% of cases.
Prosthetic joints in the hip can be hematogenously seeded by such
organisms as S. aureus and CoNS bacteremia.
Bacteremia caused by S. aureus or Neisseria gonorrhoeae can result in
seeding of joints Acute septic arthritis, an infectious disease emergency
that requires prompt drainage of pus from the joint and aggressive
antimicrobial therapy.
42. Signs and Symptoms
The classic signs and symptoms of bacteremia include
Abrupt onset of shaking chills, fever, or
Hypothermia.
About 14% of patients Hypotension
About 40% of patients Prostration and Diaphoresis (profuse sweating).
Tachypnea (abnormal rapid breathing) is an early sign of bacteremia
Adult respiratory distress syndrome occurs in 18% of patients with culture-positive septic
shock.
Other symptoms may include
Delirium,
Stupor, or
Agitation (evidence of decreased central nervous system perfusion), along with
Nausea and vomiting.
43. Signs and Symptoms
As many as 38% of patients Acute renal failure Oliguria or Anuria.
Ecthyma gangrenosum, a central necrotic area surrounded by an erythematous base, is typically associated
with Pseudomonas bacteremia.
The failure of the body to mount an elevated temperature is associated with increased mortality in newborns
and older adults.
Clinical conditions with altered laboratory values that may be indicative of bacteremia include the following:
Thrombocytopenia
Leukocytosis or leukopenia
Lactic acidosis
Hypoglycemia or hyperglycemia
Abnormal liver function test results (especially hyperbilirubinemia)
Coagulopathy
DIC
Elevations in C-reactive protein (CRP), haptoglobin, and fibrinogen levels
44. Laboratory Diagnosis
The need for Urgency
Because of the potential of a serious negative outcome of a septicemia
or bacteremia, a blood culture is one of the most important cultures to
obtain rapid accurate results.
As such, a positive blood culture is a critical value.
Critical values are those laboratory test results that are outside the
reference range and indicate a potentially fatal outcome.
The primary care provider needs to be notified immediately of all
critical values to provide immediate treatment.
In the case of a positive blood culture, the Gram stain result should be
called for immediately.
45.
46. Laboratory Diagnosis
The need for Asepctic Technique
It is important to remember that even though antiseptic technique is used in the
collection of blood, somewhere between 1% and 3% of blood cultures become
contaminated with such organisms
CoNS,
Corynebacterium spp.,
Bacillus spp. (not B. anthracis),
α-hemolytic streptococci, and
Cutibacterium (Propionibacterium) acnes which are ordinarily skin colonizers,
resulting in pseudobacteremia.
However, in some patients, such as those undergoing cancer chemotherapy, such
organisms can represent true pathogens,
It is essential to distinguish between blood culture results that reflect true
bacteremia and those that represent pseudobacteremia.
47. Laboratory Diagnosis
The need for Asepctic Technique
Therefore it is most important to prepare the skin properly before venipuncture for blood
culture.
Palpation for the vein can be checked with a gloved finger.
Cleansing the skin with 70% to 95% ethanol or isopropyl alcohol, followed by 2%
chlorhexidine (preferred) or 2% tincture of iodine, scrubbed in a concentric fashion
around the venipuncture site is recommended.
For decontamination to be effective, the antiseptic should be left on skin for at least 30
seconds.
After the venipuncture, the disinfecting agent should be removed with an alcohol pad.
Because of systemic absorption and their effect on thyroid function, iodinated antiseptics
should not be used on low-birth-weight infants.
Similarly, in infants less than 2 months of age, chlorhexidine should not be used;
instead, use alcohol swabs.
48. Laboratory Diagnosis
The need for Asepctic Technique
Blood for blood culture should be obtained by venipuncture and not
from indwelling IV or intraarterial lines.
There is more risk of isolating skin biota from indwelling lines rather than
via venipuncture.
If blood is collected from an indwelling line, a second sample collected via
venipuncture should be cultured for comparison.
For patients who have IV lines through which they are getting fluids
and/or medications, blood must be drawn below the line because blood
drawn above the line will be diluted with the fluid being transfused.
The best practice, however, is not to draw blood from the extremity that
has an IV line but to perform venipuncture on an extremity that does
not have an indwelling line.
53. Laboratory Diagnosis
The Importance of Blood Culture Bottles
When blood is collected for culture, it is critical that the blood not be allowed to clot.
The formation of a clot will trap the bacteria and reduce the ability to detect them.
Thus blood should be inoculated directly into blood culture bottles or, if necessary, into a
tube containing anticoagulants.
Tubes containing heparin, ethylenediaminetetraacetic acid (EDTA), and sodium citrate
have been shown to inhibit the growth of many different organisms and should not be
used.
Tubes containing 0.025% to 0.050% sodium polyanetholsulfonate (SPS) are better
tubes to use for collecting blood for culture,
SPS can inhibit a few organisms as well, notably
Peptostreptococcus anaerobius and
some strains of Neisseria spp. and Streptobacillus moniliformis.
Intermediate collection tubes are therefore not recommended.
54.
55.
56.
57.
58. Determining the Volume, Frequency, and
Number of Blood Cultures
Bacteremia may involve a large number of microorganisms in the blood; however, more
commonly, only a relatively small number of bacteria per unit volume of blood (as low as
one bacterium per milliliter) is seen in patients with clinically significant bacteremia.
The detection methods commonly used in most laboratories produce positive results in adult
patients with bacteremias if organisms are present in the range of 10 to 15 bacteria per
milliliter mL of blood
It has seen that the detection of bacteria by culture depends on the optimal amount of blood
collected for culture in a blood culture bottle.
Less or more amount of blood than the recommended optimal amount reduces the sensitivity of
culture.
In general, higher quantities of blood gives a better result but too high a quantity actually
reduces the culture sensitivity.
It is due to the presence of many bacterial growth inhibitors like serum, complements, WBCs etc.
in blood that will be present in high quantity if the quantity of blood is increased.
59. Determining the Volume, Frequency, and
Number of Blood Cultures
Thus blood and the inhibitors present in blood need to be diluted by the blood
culture medium.
The optimal ratio of blood to culture medium is about 1 : 5 to 1 : 10. The
dilution aids in negating the bactericidal effect of normal serum.
The recommended volume of blood for adults in most cases is 10 ml per blood
culture bottle.
In new borns, sepsis tends to be more severe because of their immature immune
defense mechanisms and generally higher numbers of microorganisms per
milliliter of blood.
It is not uncommon, however, to see low-level bacteremia in children as seen in
adults.
Because newborns and children have a smaller volume of total blood, it is not safe
to take as much blood from a new born or child as that which can be taken from an
adult.
60. Determining the Volume, Frequency, and
Number of Blood Cultures
A protocol published by the American Society for Microbiology (ASM) in
2005 used the relationship between weight and blood volume to determine
how much blood can be drawn for culture in this age group, assuming that
similarly to adults, up to 4% of blood volume can be safely obtained.
In this scheme
2 mL of blood weighing less than 1 kg (<2.2 lb),
4 mL total up to 2 kg (up to 4.4 lb),
6 mL total up to 12.7 kg (27 lb), and
10 mL total up to 36.3 kg (up to 80 lb).
A child who weighs more than 36.3 kg (>80 lb) can have as much blood
drawn as an adult (20 to 30 mL).
61. Determining the Volume, Frequency, and
Number of Blood Cultures
Because less blood is typically drawn from newborns and children
compared with adults, most commercial blood culture systems have
pediatric bottles that contain less blood culture medium into which less
blood is inoculated.
Some pediatric bottles may be supplemented with X and V factors to
enhance the recovery of H. influenzae, which is more likely (or was more
likely before implementation of the Hib vaccine) to be isolated from
children than from adults.
The frequency of bacteremic episodes is another factor to consider when
determining the timing and frequency of blood collection for culture.
Because bacteremias can be transient, intermittent, or continuous with
respect to the presence of microorganisms in the peripheral circulation,
collection of samples may depend on the type of bacteremia suspected.
62. Determining the Volume, Frequency, and
Number of Blood Cultures
In patients with transient bacteremia, organisms are immediately cleared from the
peripheral system by the reticuloendothelial system.
In such patients, clinical symptoms, especially fever, may not occur until after
bacteria have been cleared from the bloodstream.
Because these symptoms serve as the signal to obtain blood cultures, bacteremia
may go undetected because of delays in obtaining blood cultures relative to the
time of peak concentration of circulating bacteria.
Therefore in suspected cases of Intermittent bacteremia, it is recommended
that blood culture specimens be collected before an anticipated temperature
rise to ensure maximum recovery.
Continuous bacteremia the organisms are constantly released into the
bloodstream and therefore are likely to be isolated whenever the blood culture
specimen is taken.
63. Determining the Volume, Frequency, and
Number of Blood Cultures
Although a single set of blood culture bottles may yield the causative agent, two,
three, and even four sets of blood cultures are recommended.
A set consists of one bottle for recovery of aerobic organisms and a second bottle
for recovery of anaerobic organisms.
One study revealed
About 80% of bacteremias are discovered in the first set of blood culture
specimens taken,
90% are detected if two sets of specimens are taken, and
As many as 99% are detected if a third set is taken.
Blood culture sets may be obtained simultaneously or consecutively as long as
they are from separate venipunctures.
The exception is in suspected infective endocarditis, for which 30- to 60-
minute intervals are recommended to document continuous bacteremia.
64. Determining the Volume, Frequency, and
Number of Blood Cultures
Best practices for timing and blood volume collection that yield the highest percentage of
positive cultures,
At least 60 mL of blood
Collected in a 24-hour period,
With 10 mL of blood inoculated into each bottle;
Three sets of two bottles each
Another reason for inoculating multiple bottles with blood collected from multiple separate
venipunctures is to aid in the determination of whether an isolated organism is a true pathogen
or a contaminant.
The collection of one single sample should be strongly discouraged because the volume of
blood cultured is not sufficient for detecting some infections.
The significance of the isolation of CoNS or other skin microbiota from one culture is hard to
interpret.
It is not until there have been repeated isolations of the same organism from multiple cultures
collected from separate venipunctures that the significance can be determined.
65. Determining the Volume, Frequency, and
Number of Blood Cultures
Multiple blood cultures are recommended to document bacteremia, but
there is a limit to the number that should be collected.
Repeated blood cultures or daily collections of blood for culture are not
necessary.
If at least 40 mL of blood has been cultured, and antimicrobial therapy
has begun, it is best to wait for the results of the initial sets of cultures
before collecting more blood.
Most organisms grow within 3 to 5 days in the continuous monitoring
systems used in most laboratories, so it is best to wait at least 3 days
before collecting additional blood for culture.
If no organisms grow in the blood cultures, it is more reasonable to consider
other potential causes of patient symptoms, rather than culturing more
blood.
66. Blood Culture Methods
Culture Media Used in Conventional Broth Systems
A blood culture set typically includes a bottle designed for recovery of aerobic microorganisms and another
bottle for recovery of anaerobic microorganisms.
Aerobic culture bottle contains a medium that is nutritionally enriched, such as
Soybean casein digest broth,
Peptone broth,
Tryptic or trypticase soy broth,
Brain-heart infusion broth,
Brucella broth, or
Columbia broth base.
Anaerobic broth contain the same types of basic media as the aerobic culture systems, 0.5% cysteine
growth of certain thiol-requiring organisms, pre-reduced to decrease the oxidation reduction potential
growth of anaerobes.
Newer anaerobic broth media (e.g., F/X; Becton, Dickinson, Sparks, MD) contain blood-lysing agents that
reduce the time to detection of anaerobes by lysing red blood cells (RBCs), which provides added nutrients,
and WBCs, which releases phagocytized organisms.
67. Blood Culture Methods
Culture Media Used in Conventional Broth Systems
Many commercially available automated blood culture systems have blood culture bottles
containing an Antimicrobial Removal Device (ARD) A resin that non-specifically absorbs
any antimicrobial agent present in the patient’s blood, whereas other systems incorporate
activated charcoal for this purpose.
The yield of bacteria and yeasts increases with the incorporation of these inhibitors into the
culture medium.
SPS, one of the commonly used additives, performs the following functions:
Anticoagulation (effective at a 0.03% concentration)
Neutralization of the bactericidal activity (i.e., complement and lysozyme) of human serum
Prevention of phagocytosis
Inactivation of certain antimicrobial agents (e.g., streptomycin, kanamycin, gentamicin,
polymyxin B)
68. Blood Culture Methods
Culture Media Used in Conventional Broth Systems
Despite its usefulness in blood culture media, SPS inhibits the growth of certain organisms,
notably P. anaerobius, N. gonorrhoeae, N. meningitidis, and Gardnerella vaginalis.
If these organisms are suspected, 1.2% gelatin added to the blood culture bottle may help
neutralize the inhibitory effect of SPS.
In automated systems, blood culture bottles are typically incubated at 35°± 2° C for 5 days and
may be held for 7 days for manual systems.
During incubation the aerobic bottles and, in some systems, the anaerobic bottles as well are
agitated during incubation Rocking motion, BacT/ALERT (bioMérieux, Durham, NC) and
BACTEC (Becton, Dickinson, Sparks, MD)/ Rotary motion with the formation of a vortex,
VersaTREK (TREK Diagnostic Systems, Cleveland, OH) Increases oxygenation of the
broth enhancing the detection of microorganisms.
The head space of the Aerobic bottles ambient air + increased concentration of carbon dioxide
(CO2)/ Anaerobic bottles Nitrogen (N2) and CO2.
69. Blood Culture Systems
Manual Systems
Only three manual blood culture systems are currently marketed and used.
They are easy to use, inexpensive, and generally adequate for the detection of common bacteria
and fungi.
A broth-slide system (Septi-Chek, Becton, Dickinson, Sparks, MD) was designed from the
original biphasic (solid agar and broth combination) blood culture medium called the
Castañeda culture bottle.
Septi-Chek consists of a slide paddle containing chocolate (CHOC), MacConkey (MAC), and
malt extract agars (selective for yeast and fungi) attached to the top of a standard broth bottle.
Once these bottles have been inoculated, they should be tipped daily or at least twice weekly to
bathe the slide paddle with the broth culture medium, thereby allowing frequent blind
subcultures without the use of needles and syringes.
Bacterial growth appears as small discrete colonies or as a confluent growth on the slide paddle.
Most organisms will grow within 48 hours of inoculation, but the bottles are incubated for 7
days before they are discarded and reported as negative.
70. Blood Culture Systems
Manual Systems
Advantage Rapid recovery of facultative anaerobic bacteria and
Isolated colonies for identification and susceptibility
testing.
Disadvantages Slightly higher cost of materials and
Contamination rate, and they are
Labor-intensive.
An additional unvented bottle is still required for adequate isolation of
anaerobes.
71.
72. Blood Culture Systems
Manual Systems
The Oxoid Signal system (Thermo Fisher Scientific, Waltham, MA) is a manual blood culture
system in which blood is inoculated into a bottle containing a liquid medium that will support the
growth of aerobes, anaerobes, and microaerophiles.
A clear plastic signal device is then attached to the top of the bottle.
The Signal device has a long needle that extends down into the bottle below the level of the
liquid.
When microorganisms grow in the bottle, they generate CO2, which accumulates in the head
space of the bottle increases pressure on the liquid, forcing it up through the needle and into the
clear plastic Signal device indicates the growth of bacteria.
The fluid from the Signal device can then be removed for Gram staining and plating.
Bottles are held for a total of 7 days, with a terminal blind subculture performed and examined
before the culture is reported as negative.
73.
74. Blood Culture Systems
Manual Systems
Lysis centrifugation method (Isolator/Isostat; Wampole, Inverness Medical Professional Diagnostics,
Princeton, NJ) has been shown to provide optimal recovery of unusual fastidious bacteria
Bartonella,
yeasts,
filamentous and dimorphic fungi, and
mycobacteria that are causing systemic infections.
This method produces a concentrated sample of blood for direct inoculation onto appropriate solid agar
media,
As opposed to the two systems described earlier, in which blood is inoculated and incubated in a broth
medium.
The Isolator tube contains a mixture of saponin, propylene glycol, SPS, and EDTA.
This mixture causes lysis of WBCs and RBCs, releasing intracellular organisms, prevents clotting, and
neutralizes complement.
Microorganisms are concentrated through high-speed centrifugation (3000g for 30 minutes). The sediment
containing the organisms is directly inoculated onto a solid culture medium that includes fungal and
mycobacterial media.
75.
76.
77. Blood Culture Systems
Manual Systems
Examination of Blood Culture Bottles in a Manual System Blood culture bottles are examined
macroscopically with transmitted and reflected light for evidence of
Turbidity,
Heamolysis,
Gas production, or
Bacterial colonies in or on the blood layer.
If visible growth is observed, 0.25 mL of blood should be aspirated with a sterile needle and
syringe.
A smear is prepared for Gram stain and then plated to a solid medium.
In addition to examination of the blood culture fluid for evidence of microbial growth,
The Septi-Chek paddle is examined daily for the presence of colonies; the
Oxoid bottle Signal device is examined daily for the presence of fluid, indicating microbial growth
in the medium.
Any finding of microbial growth should be reported immediately to a physician.
78. Blood Culture Systems
Continuous-Monitoring BloodCulture Systems
The BACTEC system (BACTEC 460; Becton, Dickinson, Sparks, MD) was
the first automated growth detection system for blood cultures that detected the
growth of microorganisms using radio labeled carbon (14C) in the broth
medium.
When the organism in the blood culture bottle used the 14C-labeled substrate,
14CO2 was released.
The instrument monitored 14CO2 production by aspirating gas into an ionization
chamber by using sterile needles injected into the bottle.
In the ionization chamber, the amount of 14CO2 produced was measured as a
growth index and compared with an established threshold level.
If the patient’s blood culture showed a growth index that exceeded the threshold
level, the instrument sent a signal indicating that the bottle was positive.
79. Blood Culture Systems
Continuous-Monitoring Blood Culture Systems
The automated radiometric blood culture system had the advantage of
early detection of bacterial growth, especially of slow-growing
bacterial species (e.g., Mycobacterium tuberculosis).
The disadvantages included
High initial cost of the instrument,
High contamination rate (the result of inadequate needle sterilization
between bottles)
Hazards and expense associated with radioisotope disposal.
The development of subsequent automated blood culture instruments
kept the detection of CO2 as an indication of microbial growth.
80.
81. Blood Culture Systems
Continuous-Monitoring Blood Culture Systems
BACTEC 9000 Series and BD FX
To eliminate radioactive isotopes as a growth detection mechanism, Becton,
Dickinson (Sparks, MD) introduced the BACTEC 9000 series.
Three models are currently available—
The 9240 (holds 240 bottles per module),
9120 (holds 120 bottles per module), and
9050 (holds 50 bottles per module).
The FX holds 400 bottles per module.
These are non-invasive, continuous-monitoring blood culture instruments
that use fluorescence to detect CO2.
82. Blood Culture Systems
Continuous-Monitoring Blood Culture Systems
When microorganisms grow in the bottle, the CO2 that they produce is detected by a gas-
permeable sensor on the bottom of each vial.
When a bottle is placed into the instrument, a baseline reading of the sensor is taken; this
reading is used as a reference for subsequent readings.
Carbon dioxide produced by an organism diffuses into the sensor, generating hydrogen
ions.
The increase in hydrogen ion concentration increases the fluorescence output of the
sensor.
Using photodetectors, the instrument measures the amount of fluorescence every 10
minutes, which corresponds to the amount of CO2 produced by the microorganism.
A computer program then interprets these data using several algorithms to determine
when to flag a bottle as positive.
The instrument alerts the microbiologist to the presence of a positive vial by
displaying a message on the computer monitor and with an audible alarm.
83.
84.
85.
86. Blood Culture Systems
Continuous-Monitoring Blood Culture Systems
BacT/ALERT 3D System
A fully automated, nonradiometric blood culture system, the BacT/ALERT 3D system,
consists of aerobic and anaerobic bottles with pH-sensitive membranes placed in the
bottom of the bottles.
Microbial growth causes a release of CO2, which changes the pH in the sensor, as
indicated by a change in color from gray to yellow.
The color change is measured by reflected light.
The instrument measures CO2 production colorimetrically without entering the bottles.
An advantage of this system is that the changes in the color of the sensor can be detected
and verified, if necessary.
Another advantage of this system is that in 2003, bioMérieux (Durham, NC) released gas-
impermeable plastic blood culture bottles that are safer and lighter than traditional glass
bottles and do not interfere with microorganism growth or metabolism.
87.
88. Recovery of Fastidious Organisms from Blood
There are organisms that can be found in blood that require special conditions to be
detected.
Communication with the physician is critical in deciding when and what extraordinary
procedures should be performed.
Francisella tularensis.
Francisella tularensis, the causative agent of tularemia, is best recovered from a liquid
blood culture medium to which L-cysteine and glucose have been added.
Leptospira spp.
Leptospira spp. are best recovered early in the disease before onset of symptoms.
Therefore blood should be collected as soon as this infection is suspected, during the first
week of disease, with one to three drops of freshly drawn blood placed in 5 mL of
Fletcher medium.
89. Recovery of Fastidious Organisms from Blood
Alternatively, 0.1 mL heparinized blood can be inoculated onto Ellinghausen-McCullough-
Johnson-Harris (EMJH) medium.
Cultures are incubated at 30° C for 1 to 3 months in the dark and examined weekly by using dark-
field microscopy.
Other methods of diagnosis (polymerase chain reaction [PCR], serology) are recommended
because they are often more sensitive and timely for detection of this organism because treatment
can be initiated more quickly, resulting in better patient outcomes.
Brucella spp.
When Brucella is suspected, conventional, manual blood culture medium (Ruiz Castañeda) should
be held for up to 6 weeks at 35°± 2° C and terminally subcultured.
Automated blood culture systems higher yields and faster recovery 10 to 14 days.
The manual lysis centrifugation system (Isolator) increased yields risk of exposure during
manipulation and plating should be done using special safety precautions.
90. Recovery of Fastidious Organisms from Blood
Nutritionally Variant Streptococci.
The nutritionally variant streptococci (NVS) include Abiotrophia and Granulicatella.
These streptococci are adequately recovered by using standard broth culture bottles
because of the vitamin B6 present in human blood.
However, a pyridoxal-containing blood agar medium, addition of a pyridoxal disk to
a blood agar subculture plate, or staphylococci streak is necessary for subculture to
recover this group of streptococci.
The staphylococci streak test is performed with a confluent growth of the test organism
on a blood agar plate.
A single line of S. aureus is streaked across the middle of the plate. Following 24 hours
of incubation, the plate is observed for satellitism—tiny colonies growing near the S.
aureus.
These organisms frequently grow well on CHOC agar.
91. Recovery of Fastidious Organisms from Blood
Campylobacter spp.
Campylobacter lari, Campylobacter fetus, and Campylobacter upsaliensis
can be isolated from blood.
Although Campylobacter jejuni may grow in blood culture bottles,
subcultures will show no growth unless the broth is subcultured onto
selective media or enriched media, such as CHOC agar, and incubated
in a microaerophilic environment at 42° C for 48 hours.
A clue that the bottle contains Campylobacter will be the presence of curved
gram-negative rods in the blood culture broth.
These organisms are often difficult to find in the Gram stain of the blood
bottle; counterstaining with the darker pink basic fuchsin instead of
safranin may help with visualization.
An alternative stain, such as acridine orange (AO), can also be used.
92. Recovery of Fastidious Organisms from Blood
Bartonella spp.
Bartonella spp. are best isolated using lysis centrifugation and plating the
concentrated blood onto freshly prepared media containing 5% horse or rabbit
blood.
Plates must be incubated for at least 3 weeks in a humid atmosphere containing elevated
CO2 levels at 35° to 37° C.
Because the isolation of Bartonella spp. is difficult, serology and molecular methods of
detection are preferred.
HACEK Group of Gram-Negative Bacilli.
These bacteria are known causes of endocarditis and will grow in blood culture bottles
within 5 days.
Extended incubation times and a terminal subculture are recommended only if blood
cultures are negative at 5 days and there is a high clinical index of suspicion for these
93. Recovery of Fastidious Organisms from Blood
Mycobacteria from Blood.
Using special media, Mycobacterium spp. can be detected with the automated blood culture
systems discussed earlier.
Medium in the bottles contains a lysing agent and enrichment (Middlebrook based) designed
for long incubation periods, up to 6 weeks.
The Isolator system can also be used to culture blood for mycobacteria.
Plated selective media are held for 6 to 8 weeks before mycobacteria can be ruled out.
Fungemia.
The presence of fungi in the blood is termed fungemia.
Candida spp. are isolated almost as frequently as are gram-negative bacilli from blood in some
institutions.
Yeasts grow in the continuous-monitoring blood culture systems.
The best way to recover filamentous or dimorphic fungi in blood, however, is to use the Isolator
system with fungal agar plates, which are usually held for 4 weeks.
94.
95. Rapid Identification of Microorganisms
Growing in Blood Cultures
Even after using CBCMS, definitive identification and susceptibility results are typically not available until
there are isolated colonies growing on the sub-cultured plates, which usually takes 24 to 48 hours.
During this time, the patient is given empiric antimicrobial therapy that may or may not be optimally effective
for the isolate.
The sooner the patient is treated with an effective antimicrobial agent, the better the outcome.
To decrease the time it takes to identify a microorganism growing in a blood culture, several rapid methods
are available.
Direct Tube Coagulase Test.
This classic test can be performed to determine whether gram-positive cocci in clusters growing in a blood
culture are S. aureus (coagulase positive) or CoNS.
A small portion of the blood culture fluid (100 μL) is inoculated into a tube containing 0.5 mL rabbit
plasma, incubated at 35° C for 3 hours, and then examined for the presence of a clot (positive).
The result can be communicated to the physician, who will determine the best course of therapy.
Many microbiology laboratories have eliminated coagulase in favour of latex and other methods of testing for
staphylococci, so this test is not widely performed.
96. Rapid Identification of Microorganisms
Growing in Blood Cultures
Other Rapid Diagnostic Tests. Biochemical and enzymatic tests and stains that can be performed directly from
blood culture bottles include
Thermonuclease (a heat-stable DNase produced by S. aureus),
Bile solubility & Quellung capsule stain (S. pneumoniae)
Modified Kinyoun stain (Acid fast organisms)
These are presumptive, not definitive tests, but can provide the physician with preliminary information.
Fluorescence In Situ Hybridization.
Fluorescence in situ hybridization targets ribosomal ribonucleic acid (rRNA) in an organism by using an
oligonucleotide or peptide nucleic acid (PNA) probe with a fluorescent label.
Although this is a molecular method, there is no amplification of nucleic acid involved.
The procedure takes 1.5 to 3 hours to perform;
the sensitivity of species-specific probes in one study was reported to be 97%, with 95% specificity.
Different probes are available that target common organisms isolated from blood cultures, such as S. aureus,
Enterococcus spp., and Candida spp.
97.
98.
99.
100. Rapid Identification of Microorganisms
Growing in Blood Cultures
Nucleic acid amplification tests (NAATs), using PCR to directly identify microorganisms growing
in a blood culture, have been approved by the U.S. Food and Drug Administration (FDA) and are
available.
The Verigene system (Nanosphere, Northbrook, IL) amplifies nucleic acid targets that are then
detected by hybridization of oligonucleotides bound to nanosphere particles with a silver staining
process.
The FilmArray system (BioFire, Salt Lake City, UT) involves an initial nucleic acid extraction
and purification followed by PCR amplification in a two-step process.
The Verigene (Nanosphere, Northbrook, IL) and FilmArray (BioFire, Salt Lake City, UT) systems
are both multiplex assays Identify a group of gram-positive and gram-negative organisms and
yeasts, & several resistance genes within a few hours.
The GeneXpert system also offers assays that detect resistance genes resulting in a great
reduction in time to reporting and appropriate treatment, costs, and hospital stays for patients.
Disadvantage Do not perform well in the case of polymicrobial infections, and identification of
certain groups of organisms.
101.
102.
103. Verigene (Nanosphere, NOrthbrook, IL) test
cartridge. Nucleic acid amplification testing
(NAAT) can identify commonly isolated organisms
and some species with resistance genes within 2–4
hours. Isolate from blood culture bottle is
inoculated into wells.
104.
105.
106.
107.
108.
109. Rapid Identification of Microorganisms
Growing in Blood Cultures
Matrix-Assisted Laser Desorption/Ionization–Time-of- Flight
(MALDI TOF)
Mass spectrometry identifies a wide variety of organisms, including fungi,
fastidious bacteria, and anaerobes, in a matter of minutes, and is currently
used routinely in many modern microbiology laboratories (Bruker
Microflex is an instrument using this technology)
The organisms must first be subcultured from the blood and isolated in pure
culture.
Direct detection from blood is not yet cleared by the FDA
There is currently no ability to determine antimicrobial susceptibility by
using this method.