1 
Surface Modification of 
Nanoparticles for 
Biomedical Applications 
1
Multifunctionalization 
• A nanomedical device should perform several 
functions alltogether
• Consequently a multi-component 
nanomedical system can be constructed in 
reverse order of controlling events, namely 
from the inside out. The outer components 
are the first to be used. The inner 
components are the last.
Possible steps 
It is possible but rare for a single molecule 
to perform two or more functions
lipids, polimers (biocompatible-biodegradable 
materials) 
Also water is available (liposomes)
The drug can be inserted into the core
Ligands for targeting
Targeting molecules 
A. antibodies 
B. Peptides 
C. Aptamers 
D. Other ligands
Ligand should be selected to target cell membrane 
surface molecules that 
1)are physiologically overexpressed on healthy 
target organs or cells ( e.g. Transferrin receptor 
on blood brain barrier) 
or 
2) are oversexpressed as a consequence of a 
pathology (e.g. tumour markers)
Antibodies 
• Antibodies directed against tissue-specific 
antigens.
Examples of antibodies against: 
Receptors: 
Vascular endothelial growth factor (VEGF); 
folate (highly expressed in tumours); 
Transferrin, opiod peptides (Brain), 
Apolipoproteins( Brain) , 
Human epidermal growth factor (EGF) 
αvβ3 Integrin 
Matrix metalloproteinases
APTAMERS
Aptamers are oligonucleotides that bind a specific 
target molecule. Aptamers are usually created by 
selecting them from a large random sequence pool, 
but natural aptamers also exist in riboswitches. 
Aptamers can be used for both basic research and 
clinical purposes as macromolecular drugs.
aptamers offer advantages over antibodies as 
they can be engineered completely in a test tube, 
are readily produced by chemical synthesis, 
possess desirable storage properties, and elicit 
little or no immunogenicity in therapeutic 
applications.
Aptamer target protein or molecule Application 
PSMA Prostate cancer diagnosis and therapy 
WT1 Understanding Wilm's tumor 
pathogenesis 
4,4′-methylenedianiline Detecting DNA-damaging compounds 
VEGF Inhibiting angiogenesis 
RET Inhibition of pro-growth signaling 
HER-3 Reducing drug resistance in HER-2+ cancers 
TCF-1 Colon cancer growth inhibition 
Tenascin-C Glioblastoma (brain cancer) detection 
MUC1 Breast, pancreatic, ovarian cancers; targeting 
demonstrated 
PDGF/PDGFR Improving transport to tumors and targeting brain cancers 
NF-κB Targeting a transcription factor implicated in many 
diseases 
Raf-1 Inhibiting pro-growth signaling 
αvβ3 integrin Targeting tumor-associated vasculature 
Human keratinocyte growth factor Inhibiting pro-growth signali
Properties of aptamers 
versus antibodies 
Aptamers 
Binding affinity nanomolar to picomolar 
Selection is a chemical process carried out 
in vitro and can therefore target any 
protein 
Can select for ligands under a variety of 
conditions for in vitro diagnostics 
Uniform activity regardless of batch 
synthesis 
PK parameters can be changed on demand 
Investigator determines target site of 
protein 
Wide variety of chemical modifications to 
molecule for diverse functions of molecule 
Return to original conformation after 
temperature insult 
Unlimited shelf-life 
No evidence of immunogenicity 
Antibodies 
Binding affinity nanomolar to picomolar 
Selection requires a biological system, 
thus it is difficult to raise antibodies 
to toxins (not tolerated by animal) or non-immunogenic 
targets. 
Limited to physiologic conditions for 
diagnostics 
Screening monoclonal antibodies time 
consuming and expensive 
Activity of antibodies vary from batch to 
batch 
Difficult to modify PK parameters 
Immune system determines target site of 
protein 
Temperature sensitive and undergo 
irreversible denaturation 
Limited shelf-life 
Significant immunogenicity
PEPTIDES 
• Peptide sequences recognized by receptors 
responsible of binding can be identified and 
synthesized. 
• Examples are peptide sequences derived from 
ApoE apolipoprotein that are recognized by 
LDL receptor on cell membranes
Peptides aptamers 
• Peptide aptamers consist of a variable peptide loop attached at 
both ends to a protein scaffold. This double structural constraint 
greatly increases the binding affinity of the peptide aptamer to 
levels comparable to an antibody's (nanomolar range).The variable 
loop length is typically comprised of 10 to 20 amino acids, and the 
scaffold may be any protein which has good solubility and 
compacity properties. Currently, the bacterial protein Thioredoxin-A 
is the most used scaffold protein, the variable loop being inserted 
within the reducing active site, which is a -Cys-Gly-Pro-Cys- loop in 
the wild protein, the two Cysteines lateral chains being able to form 
a disulfide bridge.Peptide aptamer selection can be made using 
different systems, but the most used is currently the yeast two-hybrid 
system.
In vivo phage display 
Bacteriophage is a virus that infects and replicates 
within a bacterium 
Phage display technology is based on the ability to 
express foreign (poly)peptides as fusions to capsid 
proteins on the surface of bacteriophage 
A phage random peptide library displays as many as 
1011 different peptides
In vivo phage display 
Tissue or vascular targeting ligand•Specific 
organs or tumors•Tumor blood vessels 
•Ischemic or inflammatory lesions
Peptides vs. antibodies 
• Smaller size; better tissue penetration 
• Less possibility of immunogenicity 
• Less possibility of liver and bone marrow 
toxicity 
• Easier processing and lower production cost 
• Small molecule peptide mimmeticsavailable 
• Fast blood-pool clearance; less background 
• Weaker affinity to antigen (epitope)
OTHER LIGANDS 
• Natural ligands for receptors can be employed 
to functionalize NP surface . 
Examples: 
Folate …..binds to folate receptor 
ApoE ……. binds to LDL receptor 
Trasferrin…. binds to Tf receptor
• Problems : competition from circulating 
Folate, ApoE(lipoproteins), Transferrin
Antibodies vs 
physiological 
ligands
Antibodies are mores specific than 
natural ligands 
Much more expensive 
Approach: 1- to eliminate physiological 
competitor in blood, 2- to inject NP 
functionalized with the ligand
+ 
Via succinimide
biotin 
nanoparticle nanoparticle 
biotin 
streptavidin
streptavidin 
antibody 
nanoparticle 
biotin 
antibody 
100 nm 
10 nm
LNA 
• A locked nucleic acid (LNA), often 
referred to as inaccessible RNA, is a 
modified RNA nucleotide. The 
ribose moiety is modified with an 
extra bridge connecting the 2' 
oxygen and 4' carbon. LNA 
nucleotides can be mixed with DNA 
or RNA residues in the 
oligonucleotide whenever desired. 
Such oligomers are commercially 
available. The locked ribose 
conformation enhances base 
stacking and backbone pre-organization. 
This significantly 
increases the hybridization 
properties (melting temperature) 
of oligonucleotides.[1]
cystein

targeting

  • 1.
    1 Surface Modificationof Nanoparticles for Biomedical Applications 1
  • 2.
    Multifunctionalization • Ananomedical device should perform several functions alltogether
  • 4.
    • Consequently amulti-component nanomedical system can be constructed in reverse order of controlling events, namely from the inside out. The outer components are the first to be used. The inner components are the last.
  • 5.
    Possible steps Itis possible but rare for a single molecule to perform two or more functions
  • 7.
    lipids, polimers (biocompatible-biodegradable materials) Also water is available (liposomes)
  • 8.
    The drug canbe inserted into the core
  • 9.
  • 14.
    Targeting molecules A.antibodies B. Peptides C. Aptamers D. Other ligands
  • 15.
    Ligand should beselected to target cell membrane surface molecules that 1)are physiologically overexpressed on healthy target organs or cells ( e.g. Transferrin receptor on blood brain barrier) or 2) are oversexpressed as a consequence of a pathology (e.g. tumour markers)
  • 16.
    Antibodies • Antibodiesdirected against tissue-specific antigens.
  • 17.
    Examples of antibodiesagainst: Receptors: Vascular endothelial growth factor (VEGF); folate (highly expressed in tumours); Transferrin, opiod peptides (Brain), Apolipoproteins( Brain) , Human epidermal growth factor (EGF) αvβ3 Integrin Matrix metalloproteinases
  • 20.
  • 21.
    Aptamers are oligonucleotidesthat bind a specific target molecule. Aptamers are usually created by selecting them from a large random sequence pool, but natural aptamers also exist in riboswitches. Aptamers can be used for both basic research and clinical purposes as macromolecular drugs.
  • 22.
    aptamers offer advantagesover antibodies as they can be engineered completely in a test tube, are readily produced by chemical synthesis, possess desirable storage properties, and elicit little or no immunogenicity in therapeutic applications.
  • 24.
    Aptamer target proteinor molecule Application PSMA Prostate cancer diagnosis and therapy WT1 Understanding Wilm's tumor pathogenesis 4,4′-methylenedianiline Detecting DNA-damaging compounds VEGF Inhibiting angiogenesis RET Inhibition of pro-growth signaling HER-3 Reducing drug resistance in HER-2+ cancers TCF-1 Colon cancer growth inhibition Tenascin-C Glioblastoma (brain cancer) detection MUC1 Breast, pancreatic, ovarian cancers; targeting demonstrated PDGF/PDGFR Improving transport to tumors and targeting brain cancers NF-κB Targeting a transcription factor implicated in many diseases Raf-1 Inhibiting pro-growth signaling αvβ3 integrin Targeting tumor-associated vasculature Human keratinocyte growth factor Inhibiting pro-growth signali
  • 25.
    Properties of aptamers versus antibodies Aptamers Binding affinity nanomolar to picomolar Selection is a chemical process carried out in vitro and can therefore target any protein Can select for ligands under a variety of conditions for in vitro diagnostics Uniform activity regardless of batch synthesis PK parameters can be changed on demand Investigator determines target site of protein Wide variety of chemical modifications to molecule for diverse functions of molecule Return to original conformation after temperature insult Unlimited shelf-life No evidence of immunogenicity Antibodies Binding affinity nanomolar to picomolar Selection requires a biological system, thus it is difficult to raise antibodies to toxins (not tolerated by animal) or non-immunogenic targets. Limited to physiologic conditions for diagnostics Screening monoclonal antibodies time consuming and expensive Activity of antibodies vary from batch to batch Difficult to modify PK parameters Immune system determines target site of protein Temperature sensitive and undergo irreversible denaturation Limited shelf-life Significant immunogenicity
  • 26.
    PEPTIDES • Peptidesequences recognized by receptors responsible of binding can be identified and synthesized. • Examples are peptide sequences derived from ApoE apolipoprotein that are recognized by LDL receptor on cell membranes
  • 27.
    Peptides aptamers •Peptide aptamers consist of a variable peptide loop attached at both ends to a protein scaffold. This double structural constraint greatly increases the binding affinity of the peptide aptamer to levels comparable to an antibody's (nanomolar range).The variable loop length is typically comprised of 10 to 20 amino acids, and the scaffold may be any protein which has good solubility and compacity properties. Currently, the bacterial protein Thioredoxin-A is the most used scaffold protein, the variable loop being inserted within the reducing active site, which is a -Cys-Gly-Pro-Cys- loop in the wild protein, the two Cysteines lateral chains being able to form a disulfide bridge.Peptide aptamer selection can be made using different systems, but the most used is currently the yeast two-hybrid system.
  • 28.
    In vivo phagedisplay Bacteriophage is a virus that infects and replicates within a bacterium Phage display technology is based on the ability to express foreign (poly)peptides as fusions to capsid proteins on the surface of bacteriophage A phage random peptide library displays as many as 1011 different peptides
  • 29.
    In vivo phagedisplay Tissue or vascular targeting ligand•Specific organs or tumors•Tumor blood vessels •Ischemic or inflammatory lesions
  • 30.
    Peptides vs. antibodies • Smaller size; better tissue penetration • Less possibility of immunogenicity • Less possibility of liver and bone marrow toxicity • Easier processing and lower production cost • Small molecule peptide mimmeticsavailable • Fast blood-pool clearance; less background • Weaker affinity to antigen (epitope)
  • 31.
    OTHER LIGANDS •Natural ligands for receptors can be employed to functionalize NP surface . Examples: Folate …..binds to folate receptor ApoE ……. binds to LDL receptor Trasferrin…. binds to Tf receptor
  • 32.
    • Problems :competition from circulating Folate, ApoE(lipoproteins), Transferrin
  • 33.
  • 34.
    Antibodies are moresspecific than natural ligands Much more expensive Approach: 1- to eliminate physiological competitor in blood, 2- to inject NP functionalized with the ligand
  • 41.
  • 43.
  • 44.
    streptavidin antibody nanoparticle biotin antibody 100 nm 10 nm
  • 47.
    LNA • Alocked nucleic acid (LNA), often referred to as inaccessible RNA, is a modified RNA nucleotide. The ribose moiety is modified with an extra bridge connecting the 2' oxygen and 4' carbon. LNA nucleotides can be mixed with DNA or RNA residues in the oligonucleotide whenever desired. Such oligomers are commercially available. The locked ribose conformation enhances base stacking and backbone pre-organization. This significantly increases the hybridization properties (melting temperature) of oligonucleotides.[1]
  • 53.