This document discusses post-translational modifications in proteins. It begins with an introduction explaining that proteins undergo folding and modifications after translation to become functional. It then covers various types of post-translational modifications like the role of chaperones in protein folding, enzymes that catalyze folding like protein disulfide isomerase, and protein cleavage involved in maturation. Other modifications discussed are glycosylation, the addition of carbohydrates, and attachment of lipids. The document concludes that post-translational modifications are important for protein maturation and function.
Protein Structure, Post Translational Modifications and Protein FoldingSuresh Antre
Post-translational modifications (PTMs) are covalent processing events that change the properties of a protein by proteolytic cleavage or by addition of a modifying group to one or more amino acids.
Protein post-translational modification (PTM) plays an essential role in various cellular processes that modulates the physical and chemical properties, folding, conformation, stability and activity of proteins, thereby modifying the functions of proteins
Mismatch Repair Mechanism Is One Of The Important DNA Repair Mechanism Which Recognizes And Replaces The Wrong Nucleotides. DNA Repair Is Important Since Its Failure Leads To Deadly Diseases Like Cancer. In This Presentation, You Will Learn About DNA Repair, Mismatch Repair, Proteins Involved In Prokaryotic And Eukaryotic MMR, Diagrams, Biological Importance Of MMR And References For Further Study.
Protein Structure, Post Translational Modifications and Protein FoldingSuresh Antre
Post-translational modifications (PTMs) are covalent processing events that change the properties of a protein by proteolytic cleavage or by addition of a modifying group to one or more amino acids.
Protein post-translational modification (PTM) plays an essential role in various cellular processes that modulates the physical and chemical properties, folding, conformation, stability and activity of proteins, thereby modifying the functions of proteins
Mismatch Repair Mechanism Is One Of The Important DNA Repair Mechanism Which Recognizes And Replaces The Wrong Nucleotides. DNA Repair Is Important Since Its Failure Leads To Deadly Diseases Like Cancer. In This Presentation, You Will Learn About DNA Repair, Mismatch Repair, Proteins Involved In Prokaryotic And Eukaryotic MMR, Diagrams, Biological Importance Of MMR And References For Further Study.
An Overview...
Definition of Translation.
Def. of Eukaryotes.
Translation: An Overview.
Components of Translation.
Some Enzymes .
Ribosome Role.
Mechanism of Translation.
Initiation.
Scanning Model of Initiation.
Initiation Factors.
Animation.
Elongation.
Chain Elongation: Translocation.
Animation.
Termination.
Animation....
It's not perfect still... what are your views friends?
it describes transcription with simple diagram and animation. its steps and inhibitors are described for both eukaryotes and prokaryotes. it will be easily understood by UG students . post transcriptional modification of all the RNA are also described with diagrams.
Introduction
What RNA Splicing???
Discovery
Types
Alternative Splicing
Mechanism
Regulatory element And protein
Splicing repression
Splicing activation
Significance
Diseases
Conclusion
Refrences
An Overview...
Definition of Translation.
Def. of Eukaryotes.
Translation: An Overview.
Components of Translation.
Some Enzymes .
Ribosome Role.
Mechanism of Translation.
Initiation.
Scanning Model of Initiation.
Initiation Factors.
Animation.
Elongation.
Chain Elongation: Translocation.
Animation.
Termination.
Animation....
It's not perfect still... what are your views friends?
it describes transcription with simple diagram and animation. its steps and inhibitors are described for both eukaryotes and prokaryotes. it will be easily understood by UG students . post transcriptional modification of all the RNA are also described with diagrams.
Introduction
What RNA Splicing???
Discovery
Types
Alternative Splicing
Mechanism
Regulatory element And protein
Splicing repression
Splicing activation
Significance
Diseases
Conclusion
Refrences
Post translation modifications(molecular biology)IndrajaDoradla
description of post translation modifications which include folding,proteolytic clevage and chemical modification and protein splicing and protein degradation
Regulation of gene expression in eukariyotic organismsDhruviSuvagiya
Post-translational modification (PTM) refers to the covalent and generally enzymatic modification of proteins following protein biosynthesis. Proteins are synthesized by ribosomes translating mRNA into polypeptide chains, which may then undergo PTM to form the mature protein product. PTMs are important components in cell signaling, as for example when prohormones are converted to hormones.
Post translation control-regulation_of_gene_expression_in_eukaryotes - copyDhruviSuvagiya
Post-translational modification (PTM) refers to the covalent and generally enzymatic modification of proteins following protein biosynthesis. Proteins are synthesized by ribosomes translating mRNA into polypeptide chains, which may then undergo PTM to form the mature protein product. PTMs are important components in cell signaling, as for example when prohormones are converted to hormones.
INTRODUCTION
HISTORY
MECHANISM OF PROTEIN SYNTHESIS
TRANSCRIPTION
TRANSLATION
TRANSCRIPTION
INITIATION
ELONGATION
TERMINATION
TRANSLATION
AMINOACYLATION OF tRNA
INITIATION OF POLYPEPTIDE CHAIN
ELONGATION
TERMINATION
CONCLUSION
REFERENCES
Introduction.
History.
Central dogma.
Mechanism of protein synthesis.
Transcription.
Process of transcription
translation
Step of translation
Activation of amino acid.
Transfer of amino acid to tRNA.
Initiation of polypeptide chain
Elongation of polypeptide chain
Translocation
Termination of polypeptide chain
processing of released polypeptide chain
Main difference between protein synthesis in prokaryotes and eukryotes
Conclusion
Reference
Introduction
History
Geographical distribution
Genome Structure
Anatomy and Life Cycle
Significance of Arabidopsis in Plant Genetics
Conclusion
References.
INTRODUCTION
ABOUT DROSOPHILA
PHYSICAL APPEARANCE
CELL BIOLOGY OF DROSOPHILA DEVELOPMENT
LIFE CYCLE
THE DROSOPHILA GENOME
UNUSAL FEATURES OF DROSOPHILA
SEX DETERMINATION
GENETIC MARKERS
DEVELOPMENT IN DROSOPHILA
CLEAVAGE
THE ORIGINS OF ANTERIOR-POSTERIOR POLORITY {GENES}
CHROMOSOME ABERRATIONS
CONCLUSIONS
REFERENCES
Introduction And Classification
Anatomy Of Flower
Life Cycle Of Arabidopsis
Early Flower Development
Embryogenesis-
A. Formation Of Microspores
B. Formation Of Megaspores
Embryonic Development Starts By Establishing A Root-shoot Axis And Then Halts Inside The Seed
Arabidopsis Genome Is Rich In Developmental Control Genes.
Control Of Carpel & Fruit Development
Arabidopsis Thaliana A Model Plant
Conclusion
References
Introduction
About Drosophila
Genome of Drosophila
Life cycle
Differentiation
Development of Drosophila
* Embryonic development
* Dorsal -ventral and
* Anterior posterior development
* Body segmentation
* Homeotic gene
Conclusion
Reference
Introduction
The big question
Evolution of gene regulation
Gene regulation in eukaryotes
Points of control
Packing/unpacking DNA
Transcription
mRNA processing
mRNA transport
Translation
Protein processing
Protein degradation
Difference between eukaryotic &
prokaryotic gene expression
Conclusions
References
INTRODUCTION
DEFINATION
GAMETES
STRUCTURE OF GAMETES
SPERM
OVUM
RECOGNITION OF EGG AND SPERM
CAPACITATION
ACROSOME REACTION
SPECIES-SPECIFIC RECOGNITION
GAMETE BINDING AND RECOGNITION
GAMETE FUSION
PREVENTION OF POLYSPERMY
ACTIVATION OF GAMETE METABOLISM
FUSION OF THE GENETIC MATERIAL
SIGNIFICANCE OF FERTILIZATION
CONCLUSIONS
REFERENCES
Cellular response to environmental signals in plantKAUSHAL SAHU
INTRODUCTION
CELL SIGNALING:-
I) Unicellular and multicellular organism cell signaling.
II) Classification of intercellular communication.
RESPONSE TO STUMULI:-
(a) Plants
(b) Animals
SIGNAL TRANSDUCTION PATHWAY LINK INTERNAL AND ENVIRONMENTAL SIGNAL:
(a) Reception
(b) Signal transduction
(c) Response
HORMONE
CHEMICAL SIGNALS IN PLANTS
CONCLUSION
REFERENCE
ntroduction
2. Definition
3. Steps Of Signal Transduction
A) Reception
B) Transduction
C) Induction
4. Important component used in Signal Transduction
A) Calcium ion as second messenger
B) Protein Kinase
Types of Signal Transduction
A) Extra cellular Signal Transduction
B) Intra cellular Signal Transduction
C) Inter cellular Signal Transduction
6. Mechanism of Signal Transduction
A) GPCR pathway
B) RTK pathway
7. Example of Signal Transduction
A) In plants
B) In animals
8. Conclusion
9. Reference…
Introduction
Definition
History
Basic element in signal transduction
Basic Pathway of signal transduction
Types of signal transduction
Second messenger
Pathway of signal transduction
Conclusion
References
Introduction
Tumours
Types of Tumours
Formation of Tumours
How cancer cell differ from normal cells
Classification of cancer
The causes of cancer
Viruses and Cancer
Cancer and Gene: A. Oncogene
B. Tumours suppressor gene
Detection and Diagnosis
Therapy of cancer
How can cancer are prevented
Conclusion
References
INTRODUCTION
HISTORY
GENES INVOLVED IN CANCER
ONCOGENES
TUMOUR SUPPRESSOR GENES
ONCOGENE
INTRODUCTION
TYPES
ACTIVATION OF PROTO ONCOGENES
FUNCTION
TUMOUR SUPPRESSOR GENES
INTRODUCTION
EXAMPLE
RB GENE
TP53 GENE
CONCLUSION
REFERENCES
INTRODUCTION
Definition
history
DIFFERENT PHASE
G0 PHASE
INTERPHASE
M PHASE
CHECKPOINT
HOW DOES IT WORK
Inhibitors
Mechanism of action
Function
CONCLUSION
references
GENERAL IDEA OF SIGNAL TRANSDUCTION
DEFINATION
WHAT DOES THE TERM SIGNAL TRANSDUCTION MEANS
HISTORY
BASIC ELEMENTS IN SIGNAL TRANSDUCTION
TYPES OF SIGNAL TRANSDUCTION
SIGNALLING MOLECULE
RECEPTOR MOLECULE
MODES OF CELL CELL SIGNALING
SECOND MESSENGER
SIGNAL TRANSDUCTION PATHWAY
SOME SIGNALING PATHWAYS
SIGNIFICANCE
CONCLUSION
REFERENCE
CELL CYCLE
CELL CYCLE CHECK POINT
PHASES IN CELL CYCLE CHECK POINT
ROLE OF CYLINE AND CDKS
MUTURATIONAL PROMOTING FACTOR
FUNCTION OF MPR
CONCLUSION
REFRENCE
ion channel and carrier protein By KK Sahu SirKAUSHAL SAHU
INTRODUCTION - DEFINITION OF ION CANALS- HISTORY AND DIVERSITY OF ION CANALS- CARRIER PROTEIN-DEFINITION - CLASSES OF CARRIER PROTEIN - MECHANISM OF ION CANALS AND CARRIER PROTEIN - MEMBRANE TRANSPORT- BIOLOGICAL ROLE OF ION CANALS AND CARRIER PROTEIN - CONCLUSION - REFERENCE
Molecular event during Cell cycle By KK Sahu SirKAUSHAL SAHU
WHAT IS CELL?
WHAT IS CELL DIVISION OR CELL CYCLE?
WHY DO CELL DIVIDE?
HISTORY
CELL CYCLE
INTERPHASE
M-PHASE
MOLECULAR EVENT DURING CELL CYCLE AND CELL REGULATION
TYPES OF CELL DIVISION
IMPORTANCE OF CELL DIVISION
ABNORMALTIES OF CELL CYCLE
REFRENCES
WHAT IS CELL?
WHAT IS CELL DIVISION OR CELL CYCLE?
WHY DO CELL DIVIDE?
HISTORY
CELL CYCLE
INTERPHASE
M-PHASE
MOLECULAR EVENT DURING CELL CYCLE AND CELL REGULATION
TYPES OF CELL DIVISION
IMPORTANCE OF CELL DIVISION
ABNORMALTIES OF CELL CYCLE
REFRENCES
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
1. post translational modification in protein
cause and consequence
By
KAUSHAL KUMAR SAHU
Assistant Professor (Ad Hoc)
Department of Biotechnology
Govt. Digvijay Autonomous P. G. College
Raj-Nandgaon ( C. G. )
3. Translation
A polypeptide chain is synthesized by a complex
process called translation in which the assembly of
amino acid in a particular sequence is dictated by
messenger RNA.
DNA
transcription
mRNA
translation
protein
4. Introduction
For making linear polypeptide chain of amino
acid (primary protein) functional, certain folding
and modifications take place in it which are called
post translational modifications.
5. History
This was initially established by Christian Afinsen.
Principle
The classic principle of protein folding is that all
information required for a protein to adopt the
correct three dimensional conformation is provided
by its amino acid sequence.
The proper folding of proteins with in cells is
mediated by the activities of other protein.
6. Modification in protein
Protein is only functional when it is in folded state.
After translation formed protein is linear so it do not
have any function. For its folding certain enzymes
and protein are required. So various modifications
occur in this nascent polypeptide chain.
7. Types of modification
1 Chaperones
Protein that helps in folding of other protein.
Ron Laskey- first discovered.
Catalyze protein folding.
Two family : Hsp70 and chaperonins.
8.
9. 2 Enzymes that catalyze protein folding
#Protein disulfide isomerase- catalyzes disulfide bond
formation between cysteine residues of polypeptide
chain.
Most abundant in endoplasmic reticulum.
#peptidyl prolyl isomerase – prefering of proline to cis
form can be a limiting factor for folding,so this
enzyme convert cis form of proline to trans form and
help in folding.
10. The action of protein disulfide isomerase
The action of peptidyl
prolyl isomerase
11. 3 Protein cleavage
Cleavage of the polypeptide chain is an important
step in the maturation of many protein.
Also called proteolysis.
Ex.-removal of initiator methionine from the amino
terminus and attachment of other groups.
• Tanslocation of many protein across the
membranes.
• Active enzymes and hormones form via cleavage of
larger precursor.
14. Glycosylation
Addition of carbohydrates.
Glycoprotein are usually found in cell surface.
Glycoprotein have structural , signaling role.
There are two basic types of glycosylation which occur on:
•asparagines (N-linked, see (a) below) and
•serines and threonines (O-linked, see (b) below)
16. conclusions
• Post translational modification are very important
for the maturation of protein.
• They make the protein functional and help in
translocation of this protein to their required
places.