DNA is a molecule that carries genetic instructions for growth, development, functioning and reproduction of living organisms. It consists of two strands coiled around each other in a double helix structure. Each strand is made up of repeating nucleotide units containing a sugar, phosphate, and one of four nitrogenous bases (adenine, thymine, cytosine, guanine). The bases bond together between the strands in specific base pairs (A-T and C-G) to form the rungs of the DNA ladder. Watson and Crick discovered that the structure of DNA is a twisted ladder with the bases pairing in the middle and the sugar and phosphate molecules forming the sides.
Nucleic Acids are two types-DNA and RNA. DNA is described here which is genetic material. Its biochemical and physical structures are described. There are different types of DNA which are also described.
Nucleic Acids are two types-DNA and RNA. DNA is described here which is genetic material. Its biochemical and physical structures are described. There are different types of DNA which are also described.
DNA = deoxyribonucleic acid.
DNA carries the genetic information in the cell – i.e. it carries the instructions for making all the structures and materials the body needs to function.
DNA is capable of self-replication.
Most of the cell’s DNA is carried in the nucleus – a small amount is contained in the mitochondria.
History of DNA. introduction of DNA with short history and findings. different types of DNA with structures variations. A -DNA, B- DNA, C- DNA E- DNA D- DNA And Z DNA Detail information of these DNA with their comparison tables, different types of unusual DNA and sequences. Functions of DNA with their explanations . Nucleic acid chemical basis : Denaturation and annealing of DNA with factors for that. New DNA.
DNA = deoxyribonucleic acid.
DNA carries the genetic information in the cell – i.e. it carries the instructions for making all the structures and materials the body needs to function.
DNA is capable of self-replication.
Most of the cell’s DNA is carried in the nucleus – a small amount is contained in the mitochondria.
History of DNA. introduction of DNA with short history and findings. different types of DNA with structures variations. A -DNA, B- DNA, C- DNA E- DNA D- DNA And Z DNA Detail information of these DNA with their comparison tables, different types of unusual DNA and sequences. Functions of DNA with their explanations . Nucleic acid chemical basis : Denaturation and annealing of DNA with factors for that. New DNA.
The genetic material of any organisms is the substance that stores information about structure, function and
Development of various characteristics of a living
organisms.
DNA - The building blocks of all life - lecture notes from a presentation by Jill Pullan to Mansfield U3A Science and Technical group.
http://www.mansfield-u3a.org.uk/.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
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Monitor common gases, weather parameters, particulates.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
2. Defination
Deoxyribonucleic acid is a molecule that carries the genetic instructions used in the
growth, development, functioning and reproduction of all known
living organisms and many viruses. DNA and RNA are nucleic acids;
alongside proteins, lipids and complex carbohydrates (polysaccharides), they are
one of the four major types of macromolecules that are essential for all known
forms of life. Most DNA molecules consist of two biopolymer strands coiled
around each other to form a double helix.
5. Structure of D.N.A.
DNA is made up of six smaller molecules -- a five carbon sugar
called deoxyribose, a phosphate molecule and four different
nitrogenous bases (adenine, thymine, cytosine and guanine).
Using research from many sources, including chemically
accurate models, Watson and Crick discovered how these six
subunits were arranged to make the structure of DNA. The model
is called a double helix because two long strands twist around
each other like a twisted ladder. The rails of the ladder are made
of alternating sugar and phosphate molecules. The steps of the
ladder are made of two bases joined together with either two or
three weak hydrogen bonds.
6. The basic building block of DNA is called a NUCLEOTIDE. A
nucleotide is made up of one sugar molecule, one phosphate
molecule and one of the four bases. Here is the structural formula
for the four nucleotides of DNA. Note that the purine bases
(adenine and guanine) have a double ring structure while the
pyrimidine bases (thymine and cytosine) have only a single ring.
This was important to Watson and Crick because it helped them
figure out how the double helix was formed.
7. These pictures show a ball and stick model of two DNA nucleotides.
Gray balls are carbon atoms, blue balls are nitrogen, red balls are
oxygen and the pink ball is phosphorous. The hydrogen atoms are not
shown.
Adenine Nucleotide (purine) Cytosine Nucleotide (pyrimidine)
8. Base Pairs
The nucleotides of DNA line up so that the sugar and phosphate
molecules make two long backbones like the handrails of a ladder. To
make the rungs of the ladder, two bases join together, between the sugar
molecules on the two handrails. The phosphate molecules do not have any
"rungs" between them. THERE IS ONLY ONE WAY THE BASES CAN
PAIR UP ON THE RUNGS OF THE DNA LADDER. An adenine
molecule only pairs with a thymine. A cytosine only pairs with a guanine.
They can pair in either order on a rung, giving four possible combinations
of bases --
A-T or T-A and C-G or G-C
9. Believe it or not, it is this chain of base pairs that makes up the
code that controls what everything looks like. Below is a
picture showing how the bases pair. You will see that a purine
with two rings always pairs with a pyrimidine with one ring. In
this way the width of the DNA molecule stays the same. The
dotted lines represent weak hydrogen bonds. These form
between parts of the molecules that have weak positive and
negative charges. Because the hydrogen bonds are weak, they
are able to break apart more easily than the rest of the DNA
molecule. This is important when DNA reproduces itself and
when it does its main work of controlling traits that determine
what an organism looks like.
Adenine and Thymine pairing ***** Guanine and Cytosine pairing
10. The Double Helix Model
In this model of a very short section of DNA
you can see how the A-T and C-G base pairs
make up the rungs of the ladder and the sugars
and phosphates make up the two long strands.
In this picture the DNA is not twisted. The DNA
in one chromosome would actually be hundreds
of thousands of bases long
11.
12. These two models shows how all the atoms of the
sugars, phosphates and nitrogenous bases fit
together to make the "spiral staircase" or
"twisted ladder" shape first suggested by the x-
ray diffraction pictures of DNA taken by
Rosalind Franklin and Maurice Wilkins.