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Biological Oxidation
 Involves the transfer of electrons:
oxidation being termed for the removal of electrons
& reduction for gain of electrons
 Oxidation is always accompanied by reduction of an e-
acceptor
 Higher forms of lives – completely rely on O2 for life
processes i.e. respiration – a process by which cells
derive energy with a controlled reaction between H+
and
O2; the end product being water.
 However there do occur large no. of reactions in living
system without the involvement of molecular O2.
 The reactions are catalyzed by a set of enzymes called
as Dehydrogenases.
 Other reactions do incorporate molecular O2 for the
completion of reaction.
 O2 is also required during treatment for respiratory and
cardiac failure – for, the proper functioning of both
require O2.
Expressing Redox reactions as half reactions
 E.g. Fe 2+
+ Cu 2+
= Fe 3+
+ Cu +
which can be expressed in the form of 2 half reactions
1. Fe 2+
= Fe 3+
+ e-
(oxidized); Fe 2+
= reducing agent
2. Cu 2+
+ e-
= Cu +
(reduced) ; Cu 2+
= oxidizing agent
Reducing agent = e-
donating molecule
Oxidizing agent = e-
accepting molecule
They together make a conjugate redox pair.
Redox Potential
 Also k/as oxidation reduction potential
 Redox potential of any substance is a measure of its affinity for
electrons
 In O/R reactions the free energy change is proportional to the
tendency of reactants to donate / accept e-s
denoted by Eo
’
( for
biological systems)
 A reaction with a + ve ∆ Eo
’
has a – ve ∆Go
’
(exergonic)
 The redox potential of a biological system is usually compared
with the potential of H electrode expressed at pH 7.0
Transfer of electrons
 Can take place by any of the 4 different ways:
1. Directly as e – s
: Transfer of an e–
from Fe2+
/ Fe3+
to Cu+
/
Cu2+
(Fe2+
+ Cu2+
= Cu+
+Fe3+
)
2. As H – atom : AH2 ↔ A + 2e-
+ 2H+
; where AH2 & A make
a conjugate redox pair and posses the tendency to
reduce a next compd. B ( B/BH2 = redox pair) AH2
+ B ↔ A + BH2
3. As a hydride ion (:H-
which has 2 electrons) :
AH + H+
↔ A+
+ :H-
+ H+
4. Direct combination with Molecular oxygen
A – H + ½O2 = A – OH
A + O2 = AO2
Enzymes involved in O/R reactionsEnzymes involved in O/R reactions
 Are k/as Oxidoreductases which includes : oxidases,Are k/as Oxidoreductases which includes : oxidases,
dehydrogenases, hydroperoxidaes and oxygenases.dehydrogenases, hydroperoxidaes and oxygenases.
 OxidasesOxidases use oxygen as an electron acceptoruse oxygen as an electron acceptor
 DehydrogenasesDehydrogenases can’t use as an electron acceptorcan’t use as an electron acceptor
 HydroperoxidasesHydroperoxidases use Huse H22OO22 as a substrateas a substrate
 OxygenasesOxygenases catalyse the direct transfer of Ocatalyse the direct transfer of O22 into theinto the
substratesubstrate
 Oxidases & dehydrogenases involved in respiration;Oxidases & dehydrogenases involved in respiration;
hydroperoxidases neutralize free radicals & oxygenases arehydroperoxidases neutralize free radicals & oxygenases are
involved in biotransformationinvolved in biotransformation
OxidasesOxidases
 Catalyze the removal of hydrogen from a substrate withCatalyze the removal of hydrogen from a substrate with
the involvement of oxygen as a H – acceptorthe involvement of oxygen as a H – acceptor
 Exist in two different forms :Exist in two different forms :
 some of them are copper containing as, Cytochromesome of them are copper containing as, Cytochrome
oxidase - the terminal component of ETC which transferoxidase - the terminal component of ETC which transfer
the ethe e --
finally to Ofinally to O22..
 Other are flavoproteins as , L – aminoacid oxidase,Other are flavoproteins as , L – aminoacid oxidase,
xanthine oxidasexanthine oxidase
DehydrogenasesDehydrogenases
 Perform 2 main functions:Perform 2 main functions:
1.1. Transfer hydrogen from one substrate to another in aTransfer hydrogen from one substrate to another in a
coupled O/R reactioncoupled O/R reaction
2.2. As components of Electron transport chainAs components of Electron transport chain
o Dehydrogenases use coenzymes – nicotinamides &Dehydrogenases use coenzymes – nicotinamides &
riboflavin - as hydrogen carriersriboflavin - as hydrogen carriers
HydroperoxidasesHydroperoxidases
 Includes 2 sets of enzymes : catalase and peroxidasesIncludes 2 sets of enzymes : catalase and peroxidases
 Peroxidases reduce HPeroxidases reduce H22OO22 at the expense of several otherat the expense of several other
substancessubstances
HH22OO22 + AH+ AH22 →→ 2H2H22O + AO + A
o Catalase uses HCatalase uses H22OO22 as electron acceptor & electronas electron acceptor & electron
donordonor
2H2H22OO22 →→ 2H2H22OO
Peroxisomes are rich in oxidases and catalasesPeroxisomes are rich in oxidases and catalases
OxygenasesOxygenases
 Catalyse the incorporation of OCatalyse the incorporation of O22 into subtrates in 2 stepsinto subtrates in 2 steps
- Oxygen is dound to the active site of the enzyme- Oxygen is dound to the active site of the enzyme
- bound O- bound O22 is reduced or transferred to the substrateis reduced or transferred to the substrate
Consists of two sets of enzymesConsists of two sets of enzymes
1.1. Dioxygenases : incorporate both atoms of oxygen into theDioxygenases : incorporate both atoms of oxygen into the
substrate ; A + Osubstrate ; A + O22 →→ AOAO22
2.2. Monooxygenases : incorporates one atom of oxygen intoMonooxygenases : incorporates one atom of oxygen into
the substrate & the other is reduced to waterthe substrate & the other is reduced to water
A – H + OA – H + O22 + ZH+ ZH22 →→ A – OH + HA – OH + H22O + ZO + Z

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Biological oxidationppt1

  • 1. Biological Oxidation  Involves the transfer of electrons: oxidation being termed for the removal of electrons & reduction for gain of electrons  Oxidation is always accompanied by reduction of an e- acceptor  Higher forms of lives – completely rely on O2 for life processes i.e. respiration – a process by which cells derive energy with a controlled reaction between H+ and O2; the end product being water.
  • 2.  However there do occur large no. of reactions in living system without the involvement of molecular O2.  The reactions are catalyzed by a set of enzymes called as Dehydrogenases.  Other reactions do incorporate molecular O2 for the completion of reaction.  O2 is also required during treatment for respiratory and cardiac failure – for, the proper functioning of both require O2.
  • 3. Expressing Redox reactions as half reactions  E.g. Fe 2+ + Cu 2+ = Fe 3+ + Cu + which can be expressed in the form of 2 half reactions 1. Fe 2+ = Fe 3+ + e- (oxidized); Fe 2+ = reducing agent 2. Cu 2+ + e- = Cu + (reduced) ; Cu 2+ = oxidizing agent Reducing agent = e- donating molecule Oxidizing agent = e- accepting molecule They together make a conjugate redox pair.
  • 4. Redox Potential  Also k/as oxidation reduction potential  Redox potential of any substance is a measure of its affinity for electrons  In O/R reactions the free energy change is proportional to the tendency of reactants to donate / accept e-s denoted by Eo ’ ( for biological systems)  A reaction with a + ve ∆ Eo ’ has a – ve ∆Go ’ (exergonic)  The redox potential of a biological system is usually compared with the potential of H electrode expressed at pH 7.0
  • 5. Transfer of electrons  Can take place by any of the 4 different ways: 1. Directly as e – s : Transfer of an e– from Fe2+ / Fe3+ to Cu+ / Cu2+ (Fe2+ + Cu2+ = Cu+ +Fe3+ ) 2. As H – atom : AH2 ↔ A + 2e- + 2H+ ; where AH2 & A make a conjugate redox pair and posses the tendency to reduce a next compd. B ( B/BH2 = redox pair) AH2 + B ↔ A + BH2 3. As a hydride ion (:H- which has 2 electrons) : AH + H+ ↔ A+ + :H- + H+
  • 6. 4. Direct combination with Molecular oxygen A – H + ½O2 = A – OH A + O2 = AO2
  • 7. Enzymes involved in O/R reactionsEnzymes involved in O/R reactions  Are k/as Oxidoreductases which includes : oxidases,Are k/as Oxidoreductases which includes : oxidases, dehydrogenases, hydroperoxidaes and oxygenases.dehydrogenases, hydroperoxidaes and oxygenases.  OxidasesOxidases use oxygen as an electron acceptoruse oxygen as an electron acceptor  DehydrogenasesDehydrogenases can’t use as an electron acceptorcan’t use as an electron acceptor  HydroperoxidasesHydroperoxidases use Huse H22OO22 as a substrateas a substrate  OxygenasesOxygenases catalyse the direct transfer of Ocatalyse the direct transfer of O22 into theinto the substratesubstrate  Oxidases & dehydrogenases involved in respiration;Oxidases & dehydrogenases involved in respiration; hydroperoxidases neutralize free radicals & oxygenases arehydroperoxidases neutralize free radicals & oxygenases are involved in biotransformationinvolved in biotransformation
  • 8. OxidasesOxidases  Catalyze the removal of hydrogen from a substrate withCatalyze the removal of hydrogen from a substrate with the involvement of oxygen as a H – acceptorthe involvement of oxygen as a H – acceptor  Exist in two different forms :Exist in two different forms :  some of them are copper containing as, Cytochromesome of them are copper containing as, Cytochrome oxidase - the terminal component of ETC which transferoxidase - the terminal component of ETC which transfer the ethe e -- finally to Ofinally to O22..  Other are flavoproteins as , L – aminoacid oxidase,Other are flavoproteins as , L – aminoacid oxidase, xanthine oxidasexanthine oxidase
  • 9. DehydrogenasesDehydrogenases  Perform 2 main functions:Perform 2 main functions: 1.1. Transfer hydrogen from one substrate to another in aTransfer hydrogen from one substrate to another in a coupled O/R reactioncoupled O/R reaction 2.2. As components of Electron transport chainAs components of Electron transport chain o Dehydrogenases use coenzymes – nicotinamides &Dehydrogenases use coenzymes – nicotinamides & riboflavin - as hydrogen carriersriboflavin - as hydrogen carriers
  • 10. HydroperoxidasesHydroperoxidases  Includes 2 sets of enzymes : catalase and peroxidasesIncludes 2 sets of enzymes : catalase and peroxidases  Peroxidases reduce HPeroxidases reduce H22OO22 at the expense of several otherat the expense of several other substancessubstances HH22OO22 + AH+ AH22 →→ 2H2H22O + AO + A o Catalase uses HCatalase uses H22OO22 as electron acceptor & electronas electron acceptor & electron donordonor 2H2H22OO22 →→ 2H2H22OO Peroxisomes are rich in oxidases and catalasesPeroxisomes are rich in oxidases and catalases
  • 11. OxygenasesOxygenases  Catalyse the incorporation of OCatalyse the incorporation of O22 into subtrates in 2 stepsinto subtrates in 2 steps - Oxygen is dound to the active site of the enzyme- Oxygen is dound to the active site of the enzyme - bound O- bound O22 is reduced or transferred to the substrateis reduced or transferred to the substrate Consists of two sets of enzymesConsists of two sets of enzymes 1.1. Dioxygenases : incorporate both atoms of oxygen into theDioxygenases : incorporate both atoms of oxygen into the substrate ; A + Osubstrate ; A + O22 →→ AOAO22 2.2. Monooxygenases : incorporates one atom of oxygen intoMonooxygenases : incorporates one atom of oxygen into the substrate & the other is reduced to waterthe substrate & the other is reduced to water A – H + OA – H + O22 + ZH+ ZH22 →→ A – OH + HA – OH + H22O + ZO + Z