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AP Biology
Cellular Respiration
Harvesting Chemical Energy
AP Biology 2005-2006
Harvesting stored energy
 Energy is stored in organic molecules
 heterotrophs eat food (organic molecules)
 digest organic molecules
 serve as raw materials for building & fuels for energy
 controlled release of energy
 series of step-by-step enzyme-controlled reactions
 “burning” fuels
 carbohydrates, lipids, proteins, nucleic acids
AP Biology 2005-2006
Harvesting energy stored in glucose
 Glucose is the ideal molecule
 catabolism of glucose to produce ATP
glucose + oxygen  carbon + water + energy
dioxide
C6H12O6 6O2
6CO2 6H2O ATP

+ + + + heat
CO2 + H2O + heat
fuel
(carbohydrates)
combustion = making heat energy
by burning fuels in one step
respiration = making ATP (& less heat)
by burning fuels in many small steps
ATP
CO2 + H2O + ATP (+ heat)
respiration
AP Biology 2005-2006
How do we harvest energy from fuels?
 Digest large molecules into smaller ones
 break bonds & move electrons from one
molecule to another
 as electrons move they carry energy with them
 that energy is stored in another bond, released
as heat, or harvested to make ATP
+
e-
+
e-
+ –
loses e- gains e- oxidized reduced
oxidation reduction
AP Biology 2005-2006
How do we move electrons in biology?
 Moving electrons
 in living systems, electrons do not
move alone
 electrons move as part of H atom
+
H
+
H
+ –
loses e- gains e- oxidized reduced
oxidation reduction
C6H12O6 6O2 6CO2 6H2O ATP

+ + +
oxidation
reduction
H
AP Biology 2005-2006
Moving electrons in respiration
 Electron carriers move electrons by shuttling
H atoms around
 NAD+  NADH (reduced)
 FAD+2  FADH2 (reduced)
+ H
reduction
oxidation
P
O–
O–
O
–O
P
O–
O–
O
–O
C
C
O
NH2
N+
H
adenine
ribose sugar
phosphates
NAD
nicotinamide
Vitamin B3
P
O–
O–
O
–O
P
O–
O–
O
–O
C
C
O
NH2
N+
H H
NADH
stores energy
as a reduced
molecule
reducing power!
AP Biology 2005-2006
Coupling oxidation & reduction
 Redox reactions in respiration
 release energy as breakdown molecules
 break C-C bonds
 strip off electrons from C-H bonds by removing H atoms
 C6H12O6  CO2 = fuel has been oxidized
 electrons attracted to more electronegative atoms
 in biology, the most electronegative atom?
 O2  H2O = oxygen has been reduced
 release energy to synthesize ATP
C6H12O6 6O2 6CO2 6H2O ATP

+ + +
oxidation
reduction
 O2
AP Biology
Oxidation & reduction
 Oxidation
 adding O
 removing H
 loss of electrons
 releases energy
 exergonic
 Reduction
 removing O
 adding H
 gain of electrons
 stores energy
 endergonic
C6H12O6 6O2 6CO2 6H2O ATP

+ + +
oxidation
reduction
AP Biology 2005-2006
Overview of cellular respiration
 4 metabolic stages
 Anaerobic respiration
 1. Glycolysis
 respiration without O2
 in cytosol
 Aerobic respiration
 respiration using O2
 in mitochondria
C6H12O6 6O2 6CO2 6H2O ATP

+ + + (+ heat)
AP Biology
Chapter 9.
Cellular Respiration
STAGE 1: Glycolysis
AP Biology
Glycolysis
 Breaking down glucose
 “glyco – lysis” (splitting sugar)
 most ancient form of energy capture
 starting point for all cellular respiration
 inefficient
 generate only 2 ATP for every 1 glucose
 in cytosol
 why does that make evolutionary sense?
glucose      pyruvate
2x
6C 3C
AP Biology
Glycolysis summary
invest some ATP
harvest a little
more ATP
& a little NADH
AP Biology
How is NADH recycled to NAD+?
 Another molecule must accept H from NADH
 aerobic respiration
 ethanol fermentation
 lactic acid fermentation
 aerobic respiration
NADH
AP Biology 2005-2006
Anaerobic ethanol fermentation
 Bacteria, yeast
1C
3C 2C
pyruvate  ethanol + CO2
 Animals, some fungi
pyruvate  lactic acid
3C 3C
 beer, wine, bread
 at ~12% ethanol, kills yeast
 cheese, yogurt, anaerobic exercise (no O2)
NADH NAD+
NADH NAD+
AP Biology
Pyruvate is a branching point
Pyruvate
O2
O2
Kreb’s cycle
mitochondria
fermentation
AP Biology
Pyruvate oxidized to Acetyl CoA
Yield = 2C sugar + CO2 + NADH
reduction
oxidation
AP Biology
4C
6C
4C
4C
4C
2C
6C
5C
4C
CO2
CO2
citrate
acetyl CoA
Count the carbons & electron carriers!
x2
3C
pyruvate
reduction
of electron
carriers NADH
NADH
FADH2
NADH
ATP
This happens
twice for each
glucose
molecule
AP Biology 2005-2006
 Krebs cycle
produces:
 8 NADH
 2 FADH2
 2 ATP
Let’s go to ETC…
NADH & FADH2
What’s so
important
about NADH?
AP Biology
So why the Krebs cycle?
 If the yield is only 2 ATP, then why?
 value of NADH & FADH2
 electron carriers
 reduced molecules store energy!
 to be used in the Electron Transport Chain
AP Biology
ATP accounting so far…
 Glycolysis  2 ATP
 Kreb’s cycle  2 ATP
 Life takes a lot of energy to run, need to
extract more energy than 4 ATP!
Why stop here…
There’s got
to be more to
life than this.
AP Biology
Last stop and most important!
 Electron Transport Chain
 series of molecules built into inner
mitochondrial membrane
 mostly transport (integral) proteins
 transport of electrons down ETC linked
to ATP synthesis
 yields ~34 ATP from 1 glucose!
 only in presence of O2 (aerobic)
That
sounds more
like it!
AP Biology
Don’t forget the Mito!
 Double membrane
 outer membrane
 inner membrane (ETC here!)
 highly folded cristae*
 fluid-filled space
between membranes =
intermembrane space
 Matrix (Kreb’s here!)
 central fluid-filled space
* form fits function!
AP Biology
Electron Transport Chain
AP Biology 2005-2006
PGAL
Glycolysis
Kreb’s cycle
2 NADH
8 NADH
2 FADH2
Remember the NADH?
AP Biology
Electron Transport Chain or Chemiosmosis
 NADH passes electrons to ETC
 H cleaved off NADH & FADH2
 electrons stripped from H atoms  H+ (H ions)
 electrons passed from one electron carrier to next in
mitochondrial membrane (ETC)
 transport proteins in membrane pump H+ across inner
membrane to intermembrane space
AP Biology
But what “pulls” the
electrons down the ETC?
electrons flow
downhill to
O2
AP Biology 2005-2006
Electrons flow downhill
 Electrons move in steps from
carrier to carrier downhill to O2
 each carrier more electronegative
 controlled oxidation
 controlled release of energy
AP Biology 2005-2006
Why the build up H+?
 ATP synthase
 enzyme in inner membrane of
mitochondria
ADP + Pi  ATP
 only channel permeable to H+
 H+ flow down concentration
gradient = provides energy for
ATP synthesis
 molecular power generator!
 flow like water over water wheel
 flowing H+ cause change in
shape of ATP synthase enzyme
 powers bonding of Pi to ADP
 “proton-motive” force
AP Biology 2005-2006
Cellular respiration
AP Biology 2005-2006
 Coordination of
digestion & synthesis
 by regulating enzyme
 Digestion
 digestion of
carbohydrates, fats &
proteins
 all catabolized through
same pathways
 enter at different points
 cell extracts energy
from every source
Metabolism
CO2
AP Biology
Summary of cellular respiration
 Where did the glucose come from?
 Where did the O2 come from?
 Where did the CO2 come from?
 Where did the H2O come from?
 Where did the ATP come from?
 What else is produced that is not listed
in this equation?
 Why do we breathe?
C6H12O6 6O2 6CO2 6H2O ~36 ATP

+ + +
AP Biology
Taking it beyond…
 What is the final electron acceptor in
electron transport chain?
O2
 So what happens if O2 unavailable?
 ETC backs up
 ATP production ceases
 cells run out of energy
 and you die!
Process Where? Phosphorylation Input Output
1. Glycolysis
2. Pyruvate 
Acetyl CoA
3. Citric Acid
Cycle (Kreb’s)
4. Electron
Transport
Chain (ETC)
TOTAL
Mitochondria
Process Where? Phosphorylation Input Output
1. Glycolysis Cytosol Substrate Level 2 ATP +
Glucose
4 ATP + 2
NADH + 2
pyruvate
2. Pyruvate 
Acetyl CoA
Mitochondrial
Matrix
N/A 2 pyruvate 2 CO2 + 2
NADH + 2
Acetyl CoA
3. Citric Acid
Cycle (Kreb’s)
Mitochondrial
Matrix
Substrate Level 2 Acetyl
CoA
6 NADH +
2 FADH2 +
2 ATP +
4CO2
4. Electron
Transport Chain
(ETC)
Inner
Mitochondrial
Membrane
Oxidative 10 NADH +
2 FADH2 +
O2
~ 32 ATP +
H2O
TOTAL Cytosol +
Mitochondria
N/A Glucose +
O2
H2O + CO2
+ 36 ATP

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SUMMARY CELLULAR RESPIRATION

  • 2. AP Biology 2005-2006 Harvesting stored energy  Energy is stored in organic molecules  heterotrophs eat food (organic molecules)  digest organic molecules  serve as raw materials for building & fuels for energy  controlled release of energy  series of step-by-step enzyme-controlled reactions  “burning” fuels  carbohydrates, lipids, proteins, nucleic acids
  • 3. AP Biology 2005-2006 Harvesting energy stored in glucose  Glucose is the ideal molecule  catabolism of glucose to produce ATP glucose + oxygen  carbon + water + energy dioxide C6H12O6 6O2 6CO2 6H2O ATP  + + + + heat CO2 + H2O + heat fuel (carbohydrates) combustion = making heat energy by burning fuels in one step respiration = making ATP (& less heat) by burning fuels in many small steps ATP CO2 + H2O + ATP (+ heat) respiration
  • 4. AP Biology 2005-2006 How do we harvest energy from fuels?  Digest large molecules into smaller ones  break bonds & move electrons from one molecule to another  as electrons move they carry energy with them  that energy is stored in another bond, released as heat, or harvested to make ATP + e- + e- + – loses e- gains e- oxidized reduced oxidation reduction
  • 5. AP Biology 2005-2006 How do we move electrons in biology?  Moving electrons  in living systems, electrons do not move alone  electrons move as part of H atom + H + H + – loses e- gains e- oxidized reduced oxidation reduction C6H12O6 6O2 6CO2 6H2O ATP  + + + oxidation reduction H
  • 6. AP Biology 2005-2006 Moving electrons in respiration  Electron carriers move electrons by shuttling H atoms around  NAD+  NADH (reduced)  FAD+2  FADH2 (reduced) + H reduction oxidation P O– O– O –O P O– O– O –O C C O NH2 N+ H adenine ribose sugar phosphates NAD nicotinamide Vitamin B3 P O– O– O –O P O– O– O –O C C O NH2 N+ H H NADH stores energy as a reduced molecule reducing power!
  • 7. AP Biology 2005-2006 Coupling oxidation & reduction  Redox reactions in respiration  release energy as breakdown molecules  break C-C bonds  strip off electrons from C-H bonds by removing H atoms  C6H12O6  CO2 = fuel has been oxidized  electrons attracted to more electronegative atoms  in biology, the most electronegative atom?  O2  H2O = oxygen has been reduced  release energy to synthesize ATP C6H12O6 6O2 6CO2 6H2O ATP  + + + oxidation reduction  O2
  • 8. AP Biology Oxidation & reduction  Oxidation  adding O  removing H  loss of electrons  releases energy  exergonic  Reduction  removing O  adding H  gain of electrons  stores energy  endergonic C6H12O6 6O2 6CO2 6H2O ATP  + + + oxidation reduction
  • 9. AP Biology 2005-2006 Overview of cellular respiration  4 metabolic stages  Anaerobic respiration  1. Glycolysis  respiration without O2  in cytosol  Aerobic respiration  respiration using O2  in mitochondria C6H12O6 6O2 6CO2 6H2O ATP  + + + (+ heat)
  • 10. AP Biology Chapter 9. Cellular Respiration STAGE 1: Glycolysis
  • 11. AP Biology Glycolysis  Breaking down glucose  “glyco – lysis” (splitting sugar)  most ancient form of energy capture  starting point for all cellular respiration  inefficient  generate only 2 ATP for every 1 glucose  in cytosol  why does that make evolutionary sense? glucose      pyruvate 2x 6C 3C
  • 12. AP Biology Glycolysis summary invest some ATP harvest a little more ATP & a little NADH
  • 13. AP Biology How is NADH recycled to NAD+?  Another molecule must accept H from NADH  aerobic respiration  ethanol fermentation  lactic acid fermentation  aerobic respiration NADH
  • 14. AP Biology 2005-2006 Anaerobic ethanol fermentation  Bacteria, yeast 1C 3C 2C pyruvate  ethanol + CO2  Animals, some fungi pyruvate  lactic acid 3C 3C  beer, wine, bread  at ~12% ethanol, kills yeast  cheese, yogurt, anaerobic exercise (no O2) NADH NAD+ NADH NAD+
  • 15. AP Biology Pyruvate is a branching point Pyruvate O2 O2 Kreb’s cycle mitochondria fermentation
  • 16. AP Biology Pyruvate oxidized to Acetyl CoA Yield = 2C sugar + CO2 + NADH reduction oxidation
  • 17. AP Biology 4C 6C 4C 4C 4C 2C 6C 5C 4C CO2 CO2 citrate acetyl CoA Count the carbons & electron carriers! x2 3C pyruvate reduction of electron carriers NADH NADH FADH2 NADH ATP This happens twice for each glucose molecule
  • 18. AP Biology 2005-2006  Krebs cycle produces:  8 NADH  2 FADH2  2 ATP Let’s go to ETC… NADH & FADH2 What’s so important about NADH?
  • 19. AP Biology So why the Krebs cycle?  If the yield is only 2 ATP, then why?  value of NADH & FADH2  electron carriers  reduced molecules store energy!  to be used in the Electron Transport Chain
  • 20. AP Biology ATP accounting so far…  Glycolysis  2 ATP  Kreb’s cycle  2 ATP  Life takes a lot of energy to run, need to extract more energy than 4 ATP! Why stop here… There’s got to be more to life than this.
  • 21. AP Biology Last stop and most important!  Electron Transport Chain  series of molecules built into inner mitochondrial membrane  mostly transport (integral) proteins  transport of electrons down ETC linked to ATP synthesis  yields ~34 ATP from 1 glucose!  only in presence of O2 (aerobic) That sounds more like it!
  • 22. AP Biology Don’t forget the Mito!  Double membrane  outer membrane  inner membrane (ETC here!)  highly folded cristae*  fluid-filled space between membranes = intermembrane space  Matrix (Kreb’s here!)  central fluid-filled space * form fits function!
  • 24. AP Biology 2005-2006 PGAL Glycolysis Kreb’s cycle 2 NADH 8 NADH 2 FADH2 Remember the NADH?
  • 25. AP Biology Electron Transport Chain or Chemiosmosis  NADH passes electrons to ETC  H cleaved off NADH & FADH2  electrons stripped from H atoms  H+ (H ions)  electrons passed from one electron carrier to next in mitochondrial membrane (ETC)  transport proteins in membrane pump H+ across inner membrane to intermembrane space
  • 26. AP Biology But what “pulls” the electrons down the ETC? electrons flow downhill to O2
  • 27. AP Biology 2005-2006 Electrons flow downhill  Electrons move in steps from carrier to carrier downhill to O2  each carrier more electronegative  controlled oxidation  controlled release of energy
  • 28. AP Biology 2005-2006 Why the build up H+?  ATP synthase  enzyme in inner membrane of mitochondria ADP + Pi  ATP  only channel permeable to H+  H+ flow down concentration gradient = provides energy for ATP synthesis  molecular power generator!  flow like water over water wheel  flowing H+ cause change in shape of ATP synthase enzyme  powers bonding of Pi to ADP  “proton-motive” force
  • 30. AP Biology 2005-2006  Coordination of digestion & synthesis  by regulating enzyme  Digestion  digestion of carbohydrates, fats & proteins  all catabolized through same pathways  enter at different points  cell extracts energy from every source Metabolism CO2
  • 31. AP Biology Summary of cellular respiration  Where did the glucose come from?  Where did the O2 come from?  Where did the CO2 come from?  Where did the H2O come from?  Where did the ATP come from?  What else is produced that is not listed in this equation?  Why do we breathe? C6H12O6 6O2 6CO2 6H2O ~36 ATP  + + +
  • 32. AP Biology Taking it beyond…  What is the final electron acceptor in electron transport chain? O2  So what happens if O2 unavailable?  ETC backs up  ATP production ceases  cells run out of energy  and you die!
  • 33. Process Where? Phosphorylation Input Output 1. Glycolysis 2. Pyruvate  Acetyl CoA 3. Citric Acid Cycle (Kreb’s) 4. Electron Transport Chain (ETC) TOTAL
  • 35. Process Where? Phosphorylation Input Output 1. Glycolysis Cytosol Substrate Level 2 ATP + Glucose 4 ATP + 2 NADH + 2 pyruvate 2. Pyruvate  Acetyl CoA Mitochondrial Matrix N/A 2 pyruvate 2 CO2 + 2 NADH + 2 Acetyl CoA 3. Citric Acid Cycle (Kreb’s) Mitochondrial Matrix Substrate Level 2 Acetyl CoA 6 NADH + 2 FADH2 + 2 ATP + 4CO2 4. Electron Transport Chain (ETC) Inner Mitochondrial Membrane Oxidative 10 NADH + 2 FADH2 + O2 ~ 32 ATP + H2O TOTAL Cytosol + Mitochondria N/A Glucose + O2 H2O + CO2 + 36 ATP