Photosynthesis uses energy from sunlight to convert carbon dioxide and water into oxygen and energy-rich organic molecules like glucose. The light reactions use chlorophyll to absorb sunlight and produce ATP and NADPH through an electron transport chain. The Calvin cycle then uses the ATP and NADPH to reduce carbon dioxide and produce glucose, regenerating ADP and NADP for reuse in the light reactions. Photosynthesis is essential for life on Earth as it provides energy and organic molecules for all organisms.
this presentation contains briefing of the chapter as per NCERT syllabus in details that contains photosynthesis process, early experiments, photosynthetic pigments,photophosphorylation, light reactions and dark reactions n factors affecting photsynthesis.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
this presentation contains briefing of the chapter as per NCERT syllabus in details that contains photosynthesis process, early experiments, photosynthetic pigments,photophosphorylation, light reactions and dark reactions n factors affecting photsynthesis.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
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This presentation explores a brief idea about the structural and functional attributes of nucleotides, the structure and function of genetic materials along with the impact of UV rays and pH upon them.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
2. AP Biology
Energy needs of life
All life needs a constant input of energy
Heterotrophs (Animals)
get their energy from “eating others”
eat food = other organisms = organic molecules
make energy through respiration
Autotrophs (Plants)
produce their own energy (from “self”)
convert energy of sunlight
build organic molecules (CHO) from CO2
make energy & synthesize sugars through
photosynthesis
consumers
producers
3. AP Biology
N
P
K
…
H2O
What does it mean to be a plant
Need to…
collect light energy
transform it into chemical energy
store light energy
in a stable form to be moved around
the plant or stored
need to get building block atoms
from the environment
C,H,O,N,P,K,S,Mg
produce all organic molecules
needed for growth
carbohydrates, proteins, lipids, nucleic acids
ATP
glucose
CO2
4. AP Biology
Plant structure
Obtaining raw materials
sunlight
leaves = solar collectors
CO2
stomates = gas exchange
H2O
uptake from roots
nutrients
N, P, K, S, Mg, Fe…
uptake from roots
7. AP Biology
Chloroplasts
double membrane
stroma
fluid-filled interior
thylakoid sacs
grana stacks
Thylakoid membrane
contains
chlorophyll molecules
electron transport chain
ATP synthase
H+ gradient built up within
thylakoid sac
Plant structure H+H+
H+
H+
H+
H+
H+H+
H+
H+
H+
outer membrane inner membrane
thylakoid
granum
stroma
thylakoid
chloroplast
ATP
8. AP Biology
Photosynthesis
Light reactions
light-dependent reactions
energy conversion reactions
convert solar energy to chemical energy
ATP & NADPH
Calvin cycle
light-independent reactions
sugar building reactions
uses chemical energy (ATP & NADPH) to
reduce CO2 & synthesize C6H12O6
It’s not the
Dark Reactions!
9. AP Biology
Electron Transport Chain
like in cellular respiration
proteins in organelle membrane
electron acceptors
NADPH
proton (H+)
gradient across
inner membrane
find the double membrane!
ATP synthase
enzyme
Light reactions
H+H+
H+
H+
H+
H+
H+H+
H+
H+
H+
H+H+
H+
H+
H+
H+
H+H+
H+
H+
H+
ATP
thylakoid
chloroplast
10. AP Biology
ETC of Photosynthesis Chloroplasts transform light energy
into chemical energy of ATP
use electron carrier NADPH
generates O2
11. AP Biology
The ATP that “Jack” built
moves the electrons
runs the pump
pumps the protons
builds the gradient
drives the flow of protons
through ATP synthase
bonds Pi to ADP
generates the ATP
… that evolution built
sunlight breakdown of C6H12O6
respiration
photosynthesis
H+
ADP + Pi
H+
H+
H+
H+ H+
H+
H+
H+
ATP
12. AP Biology
Pigments of photosynthesis
Chlorophylls & other pigments
embedded in thylakoid membrane
arranged in a “photosystem”
collection of molecules
structure-function relationship
How does this
molecular structure
fit its function?
14. AP Biology
Light: absorption spectra
Photosynthesis gets energy by absorbing
wavelengths of light
chlorophyll a
absorbs best in red & blue wavelengths & least in green
accessory pigments with different structures
absorb light of different wavelengths
chlorophyll b, carotenoids, xanthophylls
Why are
plants green?
15. AP Biology
Photosystems of photosynthesis
2 photosystems in thylakoid membrane
collections of chlorophyll molecules
act as light-gathering molecules
Photosystem II
chlorophyll a
P680 = absorbs 680nm
wavelength red light
Photosystem I
chlorophyll b
P700 = absorbs 700nm
wavelength red light
reaction
center
antenna
pigments
16. AP Biology
split H2O
ETC of Photosynthesis
O
ATP
to Calvin Cycle
H+
H+
H+
H+
H+
H+
H+
H+
H+
H+
H+
sun sun
17. AP Biology
6CO2 6H2O C6H12O6 6O2
light
energy
+ +
+
Experimental evidence
Where did the O2 come from?
radioactive tracer = O18
6CO2 6H2O C6H12O6 6O2
light
energy
+ +
+
Experiment 1
6CO2 6H2O C6H12O6 6O2
light
energy
+ +
+
Experiment 2
Proved O2 came from H2O not CO2 = plants split H2O!
18. AP Biology
Photosynthesis summary
Where did the energy come from?
Where did the electrons come from?
Where did the H2O come from?
Where did the O2 come from?
Where did the O2 go?
Where did the H+ come from?
Where did the ATP come from?
What will the ATP be used for?
Where did the NADPH come from?
What will the NADPH be used for?
…stay tuned for the Calvin cycle
19. AP Biology
From CO2 C6H12O6
CO2 has very little chemical energy
fully oxidized
C6H12O6 contains a lot of chemical energy
highly reduced
Synthesis = endergonic process
put in a lot of energy
Reduction of CO2 C6H12O6 proceeds in
many small uphill steps
each catalyzed by a specific enzyme
using energy stored in ATP & NADPH
20. AP Biology
starch,
sucrose,
cellulose
& more
1C CO2
Calvin cycle
5C
RuBP
3C
RuBisCo
1. Carbon fixation
2. Reduction
3. Regeneration
of RuBP
ribulose bisphosphate
ribulose
bisphosphate
carboxylase
6 NADP
6 NADPH 6 ADP
6 ATP
3 ADP
3 ATP
used
to make
glucose
3C
3C
G3P
glyceraldehyde-3-P
C C C C C
C C C C C
C C C C C
6C
C C C C C C
C C C C C C
C C C C C C
C C C
C C C
C C C
C C C
C C C
C C C
PGA
phosphoglycerate
C C C
C C C
C C C
C C C
C C C
C C C
C C C
C
C
C
C C C
= =
|
H
|
H
|
H
|
H
|
H
|
H
C C C
– –
5C
21. AP Biology
To G3P and Beyond!
Glyceraldehyde-3-P
end product of Calvin cycle
energy rich 3 carbon sugar
“C3 photosynthesis”
G3P is an important intermediate
G3P glucose carbohydrates
lipids phospholipids, fats, waxes
amino acids proteins
nucleic acids DNA, RNA
To G3P
and beyond!
22. AP Biology
RuBisCo
Enzyme which fixes carbon from air
ribulose bisphosphate carboxylase
the most important enzyme in the world!
it makes life out of air!
definitely the most abundant enzyme
I’m green
with envy!
It’s not easy
being green!
23. AP Biology
Photosynthesis summary
Light reactions
produced ATP
produced NADPH
consumed H2O
produced O2 as byproduct
Calvin cycle
consumed CO2
produced G3P (sugar)
regenerated ADP
regenerated NADP NADP
ADP
24. AP Biology
Supporting a biosphere
On global scale,
photosynthesis is the
most important process
for the continuation of life on Earth
each year photosynthesis…
captures 121 billion tons of CO2
synthesizes 160 billion tons of carbohydrate
heterotrophs are dependent on plants as
food source for fuel & raw materials
25. AP Biology
The poetic perspective…
All the solid material of every plant
was built by sunlight out of thin air
All the solid material of every animal
was built from plant material
Then all the plants, cats,
dogs, elephants & people …
are really particles of air woven
together by strands of sunlight!
sun
air
28. AP Biology
Light Reactions
O2
H2O
Energy Building
Reactions
ATP
produces ATP
produces NADPH
releases O2 as a
waste product
sunlight
H2O ATP O2
light
energy
+
+ + NADPH
NADPH
31. AP Biology
Putting it all together
CO2 H2O C6H12O6 O2
light
energy
+ +
+
Sugar
Building
Reactions
Energy
Building
Reactions
Plants make both:
energy
ATP & NADPH
sugars
sunlight
O2
H2O
sugars
CO2
ADP
ATP
NADPH
NADP