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Metal Ion Transport and Storage




                                  1
Bio Inorganic Chemistry
             Presentation 01
Group Members.
• H.T.P. Dayananda.
• A.K.A. Perera.
• H.S. Alwis.
• S.L. Weerasinghe.
• K.G. Sapumohotti



                                   2
OUTLINE
•   Metal Ions Bioavailability.
•   General Properties of Transport Systems.
•   Mechanisms of metal ion storage & resistance.
•   Specific Metal Ions
          – K / Na
          – Fe
          – Ca

• Problems of Metal Ion Transport.

                                                3
Introduction
• Chemical Properties.
  – Catalyze oxidation & reduction. eg:Cu
  – Act as Lewis acid in hydrolytic enzymes. eg: Zn
  – Structural Co-factor.


• Problems.
  – Genetic diseases.


                                                      4
Metal Ion Bioavailability.
• Bioavailability term implies more than just the
  incidence of an element on Earth and includes its
  prevalence in environment where life is found.

   – Nickel in the Earth's core.
   – Zinc sulfide in the biosphere.
   – Molybdenum in the ocean




                                                      5
Bioavailability.
• Fe is fourth most abundent element in Earth’s
  crust.
• For mammalian cells,the source of metal ions
  is the blood plasma.




                                                  6
General properties of transport
           systems.




                                  7
Ionophores

special carrier molecules that wrap around
 metal ions.
Pass through the membrane by diffusion.




                                              8
Ion Channels
Large pores in membrane.
Allow to movement of substrate across by
 diffusion.




                                            9
Ion Channels.




                10
Ion pumps
Molecules using energy to transport ions in
 one direction through a membrane.
Primary active transport system.




                                               11
Carriers
Bind to substrate on one side of membrane.

Confrmatinal change.

Release the substrate on opposite side of
 membrane.



                                              12
Carriers




           13
Mechanisms for membrane Transport.
• Passive Transport :
     Movement of ions.
     Due to concentration gradient.
     Requiring no energy source.
     Ionophores , Ion channels.
• Active Transport :
     Movement of ions.
     Against the concentration gradient.
     Requiring energy from ATP hydrolysis.
     Ion pumps.

                                              14
Metal ion storage & Resistance




                                 15
Mechanisms of metal ion storage &
            resistance
• Organisms store metal ions.
• It have more benefits.
     • Allow the accumulation of high intacellular lebels of
       metal ions without the toxic.
• Understood mechanis of metal ion storage
  are,
        Ferritin
        Metallothionein




                                                               16
Ferritin
• Ferritin are disscussed in greater detail under
  Iron Storage.




                                                    17
Metallothionein




                  18
Metallothionein
• cytopalmic metal- binding protein.
• Involved in ion storage & detoxification.
• Small ,cysteine-rich proteins that bind
  Zn2+,Cd2+ Cu2+ & cys ligands.
• Found in cyanobacteria,fungi,plants ,insects &
  vertebrates.
• Bind metal ions with high affinity.


                                               19
Sodium -Na+
• Major cation in human body
• Important for
  –   membrane function
  –   Nerve impulses
  –   Muscle contraction
  –   Prevent blood clotting
• Present in stomach walls, gallbladder and
Potassium- K+
• Important for
  – Membrane function
  – Maintaining osmotic balance
  – Cofactor in photosynthesis and respiration
Sodium &Potassium
• Concentration of [Na+]
  &[K+]
   – Inside red blood cells [Na+]
     =0.01M [K+] =0.09M
   – Outside red blood cells
     [Na+] =0.16M [K+] =0.01M
• Ion pump is required
  to maintain concentration
  gradient
• Also
   – Ionphore
   – Ion channel are used for
     Na & K ion transport
Na -K Pump
Mechanism of Na+ –K+ pump
Sodium –Potassium Pump
• Na+ /K+ - ATPase
   -ATP + 3Na+
   –   Phosphorylation of enzyme
   –   Eversion & releasing Na+
   –   Binding of 2K+
   –   Dephosphorylation
   –   Eversion & releasing K+


• 3Na+ + 2K+ +ATP4- +H2O
  3Na+ + 2K+ +ATP3- +H3PO 43- +
  H+
Selectivity of the process
• Depends upon
  – Differences in ionic radii.
  – Coulomb forces
• Bases stronger than H2O – bind preferentially
  to the hard acid Na
• Bases weaker than H2O – bind preferentially to
  the hard acid K
Iron
• Most abundant transition element.
• Involve in many biological roles.
             e.g. oxygen transport.
                  electron transport.
                  metabolism.
• Versatility :
           Fe2+ / Fe3+
           High spin / low spin
           Hard / soft
           Labile / inert
           Co-ordination number 4 , 5, 6


                                            27
Transport of iron
• Organisms mobilize Fe.
• Three general ways which mobilization is
  accomplished.
  Chelation.
  Reduction.
  Acidification.




                                             28
chelation
Bacteria, fungi, and some plants use chelating
  agents called “siderophores” to obtain ions.
Siderophores :
  Small molecules released into the environment.
  Complexation of fe3+ solubilizes its for uptake.
  Ligands are catechol and hydroxamic acid
   chelates.

     Mainly 3 examples.


                                                      29
Siderophores




               30
Iron
• Enterobactin :
     3 catechol chelates bound to a 1 membered ring.
     Complex anion is soluble.




                                                        31
iron
• ferrichromes :
             • 3 hydroxamic acids, cyclic peptide.




                                                     32
iron
• Ferrioxamines :
     • 3 hydroxamic acids , acyclic peptide.




                                               33
Reduction
• Reduce extracellular fe3+ to fe2+

• Reduction increase solubility & support the
  transportation of particular Fe.

• Reduction of Fe3+ mediated by
  “ferrireductases”


                                                34
Acidification.
• Conjuction with reduction dependent
  pathways.
• Acidify extracellular environment.
• Increase the soluble ferric concentation by
  inbiting formation of hydrolysis prducts
  [Fe(OH)3]



                                                35
Mammalian iron transport.




                            36
Mammalian iron transport




                           37
Receptor mediated endocytsis




                               38
Transferrin
• 700 amino acid serum protein which has
  higher affinity towards ferric ions.
     Synthesized in liver.
     Secreted into the plasma.
     From a chelate complex.




                                           39
Transferrin
• Transferrin : mammelian transport αβ dimer
  protein.
  – Ironcaptured as Fe2+ & oxidized to Fe3+
  – Co32- ust bind at same time ; Synergism.




                                               40
Transferrin




              41
Mammalian Iron Storage
• Ferritin
  Found in vertebrates , plants , fungi & bacteria.

  Primary site of Fe storage.

  It has outer coat of protein an inner core of
   hydrous ferric oxide.



                                                       42
Ferritin




           43
Ferritin
• The iron strorage protein.
  – Ferritin is a protein, store iron & release it in a
    controlled fashion.
  – If the blood has too little iron, ferritin can release
    more.
  – If the blood or tissues of body have too much iron,
    ferritin can help to store the excess iron.



                                                         44
Ferritin
• Ferritin is synthesized as needed.
  – Normal iron load is 3 – 5 grams in human.
  – Ferritin is stored in cell in the bone marrow,liver &
    spleen.
  – Siderosis : iron overload
            » Deposits in liver, kidneys & heart
            » Treated by chelation therapy. (desferrioxamine)




                                                                45
Calcium

• Present in bones, enamel, shells
• Important for
  – Signal pathways
  – Skeletal material
  – Maintaining potential difference across
    membranes
• Concentration
  – Outside cell = 0.001M
  – Inside cell = 10-7 M
Calcium Regulaton.




                     47
Calcium storage

• Egg shells. Coral skeleton –CaCO3
• Bones & teeth – Calcium Hydroxyapatite in
  collagen
  – Collagen – triple helix fibrous protein
  – Hydroxyapatite-around collagen
  If required Ca2+ can be released and reabsorbed.
Calcium pump
• Ca is in cytoplasm.
• pumped in to sarcoplasmic reticulum (A form of
  endoplasmic reticulum)
• Up to 0.03M
• Inside SR Ca is bound by calsequestrin
• Hormone induced ion channels releases Ca from
  SR to muscle cell
• Muscle contraction is triggered by sudden
  release of Ca
Calcium pump




               50
Transport & storage problems.
• Capture of trace ions from the environment
  – Control the concentration.
  – Bulk ones present in high concentration.
  – Trace ones actively accumulated &insoluble.
• Selectivity of ion uptake is essential.
  – Toxic ions excluded.
  – Beneficial ions accumulated.
  – Specialized molecules have evolved.

                                                  51
Transport & storage problems.
• Charged ions pass through a Hydrophobic
  Membrane.
     • Neutral gases & low charge density ions move directly
       but high charge density require help.


• Metal ions transport to their location for use
  & storage.
     • Release from ligand & storage require additional
       molecules.


                                                               52
53

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Metal ion transport and storage

  • 1. Metal Ion Transport and Storage 1
  • 2. Bio Inorganic Chemistry Presentation 01 Group Members. • H.T.P. Dayananda. • A.K.A. Perera. • H.S. Alwis. • S.L. Weerasinghe. • K.G. Sapumohotti 2
  • 3. OUTLINE • Metal Ions Bioavailability. • General Properties of Transport Systems. • Mechanisms of metal ion storage & resistance. • Specific Metal Ions – K / Na – Fe – Ca • Problems of Metal Ion Transport. 3
  • 4. Introduction • Chemical Properties. – Catalyze oxidation & reduction. eg:Cu – Act as Lewis acid in hydrolytic enzymes. eg: Zn – Structural Co-factor. • Problems. – Genetic diseases. 4
  • 5. Metal Ion Bioavailability. • Bioavailability term implies more than just the incidence of an element on Earth and includes its prevalence in environment where life is found. – Nickel in the Earth's core. – Zinc sulfide in the biosphere. – Molybdenum in the ocean 5
  • 6. Bioavailability. • Fe is fourth most abundent element in Earth’s crust. • For mammalian cells,the source of metal ions is the blood plasma. 6
  • 7. General properties of transport systems. 7
  • 8. Ionophores special carrier molecules that wrap around metal ions. Pass through the membrane by diffusion. 8
  • 9. Ion Channels Large pores in membrane. Allow to movement of substrate across by diffusion. 9
  • 11. Ion pumps Molecules using energy to transport ions in one direction through a membrane. Primary active transport system. 11
  • 12. Carriers Bind to substrate on one side of membrane. Confrmatinal change. Release the substrate on opposite side of membrane. 12
  • 13. Carriers 13
  • 14. Mechanisms for membrane Transport. • Passive Transport : Movement of ions. Due to concentration gradient. Requiring no energy source. Ionophores , Ion channels. • Active Transport : Movement of ions. Against the concentration gradient. Requiring energy from ATP hydrolysis. Ion pumps. 14
  • 15. Metal ion storage & Resistance 15
  • 16. Mechanisms of metal ion storage & resistance • Organisms store metal ions. • It have more benefits. • Allow the accumulation of high intacellular lebels of metal ions without the toxic. • Understood mechanis of metal ion storage are, Ferritin Metallothionein 16
  • 17. Ferritin • Ferritin are disscussed in greater detail under Iron Storage. 17
  • 19. Metallothionein • cytopalmic metal- binding protein. • Involved in ion storage & detoxification. • Small ,cysteine-rich proteins that bind Zn2+,Cd2+ Cu2+ & cys ligands. • Found in cyanobacteria,fungi,plants ,insects & vertebrates. • Bind metal ions with high affinity. 19
  • 20. Sodium -Na+ • Major cation in human body • Important for – membrane function – Nerve impulses – Muscle contraction – Prevent blood clotting • Present in stomach walls, gallbladder and
  • 21. Potassium- K+ • Important for – Membrane function – Maintaining osmotic balance – Cofactor in photosynthesis and respiration
  • 22. Sodium &Potassium • Concentration of [Na+] &[K+] – Inside red blood cells [Na+] =0.01M [K+] =0.09M – Outside red blood cells [Na+] =0.16M [K+] =0.01M • Ion pump is required to maintain concentration gradient • Also – Ionphore – Ion channel are used for Na & K ion transport
  • 24. Mechanism of Na+ –K+ pump
  • 25. Sodium –Potassium Pump • Na+ /K+ - ATPase -ATP + 3Na+ – Phosphorylation of enzyme – Eversion & releasing Na+ – Binding of 2K+ – Dephosphorylation – Eversion & releasing K+ • 3Na+ + 2K+ +ATP4- +H2O 3Na+ + 2K+ +ATP3- +H3PO 43- + H+
  • 26. Selectivity of the process • Depends upon – Differences in ionic radii. – Coulomb forces • Bases stronger than H2O – bind preferentially to the hard acid Na • Bases weaker than H2O – bind preferentially to the hard acid K
  • 27. Iron • Most abundant transition element. • Involve in many biological roles. e.g. oxygen transport. electron transport. metabolism. • Versatility : Fe2+ / Fe3+ High spin / low spin Hard / soft Labile / inert Co-ordination number 4 , 5, 6 27
  • 28. Transport of iron • Organisms mobilize Fe. • Three general ways which mobilization is accomplished. Chelation. Reduction. Acidification. 28
  • 29. chelation Bacteria, fungi, and some plants use chelating agents called “siderophores” to obtain ions. Siderophores : Small molecules released into the environment. Complexation of fe3+ solubilizes its for uptake. Ligands are catechol and hydroxamic acid chelates. Mainly 3 examples. 29
  • 31. Iron • Enterobactin : 3 catechol chelates bound to a 1 membered ring. Complex anion is soluble. 31
  • 32. iron • ferrichromes : • 3 hydroxamic acids, cyclic peptide. 32
  • 33. iron • Ferrioxamines : • 3 hydroxamic acids , acyclic peptide. 33
  • 34. Reduction • Reduce extracellular fe3+ to fe2+ • Reduction increase solubility & support the transportation of particular Fe. • Reduction of Fe3+ mediated by “ferrireductases” 34
  • 35. Acidification. • Conjuction with reduction dependent pathways. • Acidify extracellular environment. • Increase the soluble ferric concentation by inbiting formation of hydrolysis prducts [Fe(OH)3] 35
  • 39. Transferrin • 700 amino acid serum protein which has higher affinity towards ferric ions. Synthesized in liver. Secreted into the plasma. From a chelate complex. 39
  • 40. Transferrin • Transferrin : mammelian transport αβ dimer protein. – Ironcaptured as Fe2+ & oxidized to Fe3+ – Co32- ust bind at same time ; Synergism. 40
  • 42. Mammalian Iron Storage • Ferritin Found in vertebrates , plants , fungi & bacteria. Primary site of Fe storage. It has outer coat of protein an inner core of hydrous ferric oxide. 42
  • 43. Ferritin 43
  • 44. Ferritin • The iron strorage protein. – Ferritin is a protein, store iron & release it in a controlled fashion. – If the blood has too little iron, ferritin can release more. – If the blood or tissues of body have too much iron, ferritin can help to store the excess iron. 44
  • 45. Ferritin • Ferritin is synthesized as needed. – Normal iron load is 3 – 5 grams in human. – Ferritin is stored in cell in the bone marrow,liver & spleen. – Siderosis : iron overload » Deposits in liver, kidneys & heart » Treated by chelation therapy. (desferrioxamine) 45
  • 46. Calcium • Present in bones, enamel, shells • Important for – Signal pathways – Skeletal material – Maintaining potential difference across membranes • Concentration – Outside cell = 0.001M – Inside cell = 10-7 M
  • 48. Calcium storage • Egg shells. Coral skeleton –CaCO3 • Bones & teeth – Calcium Hydroxyapatite in collagen – Collagen – triple helix fibrous protein – Hydroxyapatite-around collagen If required Ca2+ can be released and reabsorbed.
  • 49. Calcium pump • Ca is in cytoplasm. • pumped in to sarcoplasmic reticulum (A form of endoplasmic reticulum) • Up to 0.03M • Inside SR Ca is bound by calsequestrin • Hormone induced ion channels releases Ca from SR to muscle cell • Muscle contraction is triggered by sudden release of Ca
  • 51. Transport & storage problems. • Capture of trace ions from the environment – Control the concentration. – Bulk ones present in high concentration. – Trace ones actively accumulated &insoluble. • Selectivity of ion uptake is essential. – Toxic ions excluded. – Beneficial ions accumulated. – Specialized molecules have evolved. 51
  • 52. Transport & storage problems. • Charged ions pass through a Hydrophobic Membrane. • Neutral gases & low charge density ions move directly but high charge density require help. • Metal ions transport to their location for use & storage. • Release from ligand & storage require additional molecules. 52
  • 53. 53