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“Knowledge is a process of piling up
facts; wisdom lies in their
simplification.”
VIRUSES: GENERAL PROPERTIES;
DISEASES, AND HOST RESPONSE.
``Probably the most common infectious agents``
Class of 2011 3rd
year
Prof. Abbas Hayat
• Definition :
1. Viruses are the smallest infective
agents. Most form of life—not only
humans animals and plants, but
bacteria also are susceptible to
infection with appropriate viruses.
2. Obligate intracellular parasites
3. Have only RNA or DNA. A imp.
distinguishing factor from bacteria and
other infectious agents.
Some medically important viruses.DNA Viruses
Family Virus Disease
Poxvirus Variola,
molluscam
Smallpox,
molluscam
contagiosum
Herpes virus Herpes simplex,
vaicella zoster,
cytomegalo
virus, EB virus.
Herpes, chicken
pox, shingles,
infectious
mononuleosis.
Adenoviruses Adenoviruses Sore throat,
conjunctivitis,
G.I.T. infections.
Hepadnavirus Hepatitis B Hepatitis
Papoviruses Pappiloma,
polyoma, SV
40
Warts, progressive
multifocal
leucoencephalopathy
Parvoviruses B19 Erythema infectiosum,
hemolytic crisis.
Some medically important RNA viruses
Orthomyxovirus Influenza Influenza
Paramyxoviruses Para influenza,
Respiratory
syncytial,
measles, mumps
Respiratory inf.
Measles, mumps.
Rhabdoviruses Rabies Rabies
Picornaviruses Enteroviruses,
rhinoviruses,
Meningitis,
paralysis, colds,
Flaviviruses Flavivirus Encephalitis,
febrile disease.
Bunyaviruses Buniyaviruses,
Hantan virus
Encephalitis,
febrile disease
Reoviruses Rotavirus gastroenteritis
Arenaviruses Lynphocytic
choriomeningitis,
Lassa virus.
Meningitis ,
febrile disease
Retroviruses HTLV -I, II,
HIV -I, II
T cell leukemia,-
lymphoma, AIDS
• Virus like particles, or incomplete viruses.
• Bacteriophage: bacteriophage
from 'bacteria' and Greek φ γε νᾰ ῖ phagein "to eat") is any
one of a number of viruses that infect
bacteria. Bacteriophages are among the
most common biological entities on Earth
• Plasmid: DNA molecule that is separate from, and can replicate
independently of, the chromosomal DNA. Are double-stranded and,
in many cases, circular. Plasmids usually occur naturally in bacteria,
but are sometimes found in eukaryotic organisms
• Prion : infectious particles composed of protein and no
detectable nucleic acid or envelope. cause of certain slow diseases
like Creutzfeldt-Jacob Disease (CJD) in human and scrapie in
sheep
Three main properties :
1. Small size. 10nm- 300nm.
Bacteria are approx.
1000nm and R.B.C 7500nm.
2. Genome . DNA or RNA
3. Metabolically inert . No
metabolic activity outside
susceptible host cells;
No active Ribosome's or protein
synthesizing equipment
Some have enzymes within their
particle.
Cannot multiply in inanimate media
but only in living cells.
On entry into susceptible cell, viral
genome or nucleic acid is
transcribed into ----or itself acts as
--------virus specific messenger or
mRNA which then directs the
replication of new virus particles.
STRUCTURE OF VIRUSES
• Virus basically consists of a core of
nucleic acid surrounded by a
protein coat.
• Protein coat protects the viral
genome from inactivation by
adverse environment factors e.g.
nucleases in the blood stream. It is
antigenic and often responsible for
stimulating the production of
The structure which makes up a virus particle
are known as :
• VIRION : Intact virus particle.
• Capsid : The protein coat .
• Capsomere : the protein structural units of
which the Capsid is composed.
• Nucleic acid : RNA or DNA
• Envelope : particles of many viruses
surrounded by a lipoprotein envelope,
containing viral antigens, but also partly
derived from the plasma or, in some cases the
nuclear membrane of the host cell.
THREE TYPES OF SYMMETRY
• 1. Cubic. in which particle are
icosohedral protein shells with nucleic
acid contained inside.
• 2. Helical. In which the particles
contains an elongated nucleocpsid ;
the capsomere are arranged round the
spiral of nucleic acid. Most helical
viruses possess an outer envelope.
• 3. Complex. Does not confirm to any
CUBIC SYMMETRY
ICOSOHEDRAL & HELICAL SYMMETRY
THREE METHODS OF
CULTIVATION
• Tissue Culture . Cells obtained from man
or animal are grown in artificial culture in
glass vessels in the Lab, Cells are living and
metabolizing and can support viral replication.
• Chick Embryo. Fertile chick eggs are used.
• Lab. Animals. Mice Rabbits Ferrets and
Monkeys
THREE EFFECTS OF VIRUSES ON CELLS
1. Cell Death . The infection is lethal : it causes a
cytopathic effect (CPE) which kills the cells.
2. Cell Transformation. The cell is transformed
from a normal to a malignant or cancerous
cell
3. Latent Infection . The virus remains within
the cell in a potentially active state but
produces no obvious effect on the cells
function.
THREE METHODS OF PENETRATION
THREE TYPES OF VIRAL DISEASES
Viruses are imp. and common
cause of human disease
especially in children.
1. Most are mild and patients
makes a complete
recovery.
2. Many infections are silent
and the virus multiplies in
the body without causing
any symptoms.
3. Few are severe and always
Host responses to viral
infection:
SPECIFIC IMMUNE
RESPONSES
(Adaptive Immunity)
NON SPECIFIC
DEFENSES
(Innate Immunity)
1. Neutralizing antibody
response
1. Interferon - alpha-
interferon mainly,
stimulated in
surrounding cells
2. Cell-mediated
responses (i.e.,
cytotoxic T
lymphocytes)
2. Body fluids -
stomach acid, tears
3. Complement-
mediated lysis
3. Mechanical barriers
- respiratory
Acute infections:
• 1.Hit and run infections.
Characterized by the
common cold viruses
(rhinoviruses).
• 2. Short incubation period
(36 to 48 hours).
Pathology in the upper respiratory tract due to epithelial
cell killing and secondary invasion by normal flora of
oral bacteria. Symptoms last for 5-7 days eliminated
by the host.
Protection not good since there are >1000 serotypes of
rhinovirus. orthomyxoviruses, which include influenza
A and B.
Protection against subsequent infection may be poor
because these viruses can change their antigenic
profile of their surface proteins, e.g. hemagglutinin
(HA) and neuraminidase (NA), by either point
mutations (drift), or recombination, which results in a
completely different gene (shift). (Influenza viruses are
capable of antigenic shift because they have
segmented single-stranded RNA genomes).
Systemic infections.
1. Characterized by the common childhood diseases
caused by measles, chickenpox, mumps, and
rubella.
2. Incubation period is long - 14 to 21 days. There
are two viremic phases during the incubation
period:
Replication at primary site ---- Primary viremia ----
replication in lymphoreticular system and viscera
---- Secondary viremia ---- target organs
Several types of persistent viral infections
exist:
• Latent infections: After an acute cytocidal stage,
the virus becomes latent.
• The virus when latent does not replicate ,
produces limited mRNA. Latency may occur in
non-dividing cells such as neurons (HSV I, HSV-II
and VZV).
• Chronic infections: Persistence of virus after
acute phase with active replication of virus. May
cause disease in normal individuals, e.g. hepatitis
B, or not, e.g. JC and EBV.
• Chronic infection with neoplasia: Transformation
of virus infected cells usually after years of
persistence, e.g. HTLV-I , HTLV-II, hepatitis B,
Hep C, and HPV 16 and 18.
• The outcome can change depending on
the state of the individual, i.e. whether
they become immunocompromised.
• The site of viral persistence is
important as it would be difficult to
remain completely latent or with
minimal viral transcription and
translation in rapidly dividing cells such
as those lining the small intestine.
• Viral persistence requires viruses to develop
ways to evade immune responses. Herpes
Thank you & Remember
Keep on alert for viruses around you, they can
1. transform you
2. have cyto- pathic effects on you
3. Stay latent inside you…………….
``And you can do nothing much about them…..so
relax and keep going as best as you can.``
Introduction to virology

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Introduction to virology

  • 1. “Knowledge is a process of piling up facts; wisdom lies in their simplification.”
  • 2. VIRUSES: GENERAL PROPERTIES; DISEASES, AND HOST RESPONSE. ``Probably the most common infectious agents`` Class of 2011 3rd year Prof. Abbas Hayat
  • 3. • Definition : 1. Viruses are the smallest infective agents. Most form of life—not only humans animals and plants, but bacteria also are susceptible to infection with appropriate viruses. 2. Obligate intracellular parasites 3. Have only RNA or DNA. A imp. distinguishing factor from bacteria and other infectious agents.
  • 4.
  • 5.
  • 6.
  • 7. Some medically important viruses.DNA Viruses Family Virus Disease Poxvirus Variola, molluscam Smallpox, molluscam contagiosum Herpes virus Herpes simplex, vaicella zoster, cytomegalo virus, EB virus. Herpes, chicken pox, shingles, infectious mononuleosis. Adenoviruses Adenoviruses Sore throat, conjunctivitis, G.I.T. infections.
  • 8. Hepadnavirus Hepatitis B Hepatitis Papoviruses Pappiloma, polyoma, SV 40 Warts, progressive multifocal leucoencephalopathy Parvoviruses B19 Erythema infectiosum, hemolytic crisis.
  • 9. Some medically important RNA viruses Orthomyxovirus Influenza Influenza Paramyxoviruses Para influenza, Respiratory syncytial, measles, mumps Respiratory inf. Measles, mumps. Rhabdoviruses Rabies Rabies Picornaviruses Enteroviruses, rhinoviruses, Meningitis, paralysis, colds,
  • 10. Flaviviruses Flavivirus Encephalitis, febrile disease. Bunyaviruses Buniyaviruses, Hantan virus Encephalitis, febrile disease Reoviruses Rotavirus gastroenteritis Arenaviruses Lynphocytic choriomeningitis, Lassa virus. Meningitis , febrile disease Retroviruses HTLV -I, II, HIV -I, II T cell leukemia,- lymphoma, AIDS
  • 11. • Virus like particles, or incomplete viruses. • Bacteriophage: bacteriophage from 'bacteria' and Greek φ γε νᾰ ῖ phagein "to eat") is any one of a number of viruses that infect bacteria. Bacteriophages are among the most common biological entities on Earth • Plasmid: DNA molecule that is separate from, and can replicate independently of, the chromosomal DNA. Are double-stranded and, in many cases, circular. Plasmids usually occur naturally in bacteria, but are sometimes found in eukaryotic organisms • Prion : infectious particles composed of protein and no detectable nucleic acid or envelope. cause of certain slow diseases like Creutzfeldt-Jacob Disease (CJD) in human and scrapie in sheep
  • 12. Three main properties : 1. Small size. 10nm- 300nm. Bacteria are approx. 1000nm and R.B.C 7500nm. 2. Genome . DNA or RNA 3. Metabolically inert . No metabolic activity outside susceptible host cells;
  • 13. No active Ribosome's or protein synthesizing equipment Some have enzymes within their particle. Cannot multiply in inanimate media but only in living cells. On entry into susceptible cell, viral genome or nucleic acid is transcribed into ----or itself acts as --------virus specific messenger or mRNA which then directs the replication of new virus particles.
  • 14.
  • 15. STRUCTURE OF VIRUSES • Virus basically consists of a core of nucleic acid surrounded by a protein coat. • Protein coat protects the viral genome from inactivation by adverse environment factors e.g. nucleases in the blood stream. It is antigenic and often responsible for stimulating the production of
  • 16. The structure which makes up a virus particle are known as : • VIRION : Intact virus particle. • Capsid : The protein coat . • Capsomere : the protein structural units of which the Capsid is composed. • Nucleic acid : RNA or DNA • Envelope : particles of many viruses surrounded by a lipoprotein envelope, containing viral antigens, but also partly derived from the plasma or, in some cases the nuclear membrane of the host cell.
  • 17.
  • 18. THREE TYPES OF SYMMETRY • 1. Cubic. in which particle are icosohedral protein shells with nucleic acid contained inside. • 2. Helical. In which the particles contains an elongated nucleocpsid ; the capsomere are arranged round the spiral of nucleic acid. Most helical viruses possess an outer envelope. • 3. Complex. Does not confirm to any
  • 21.
  • 22. THREE METHODS OF CULTIVATION • Tissue Culture . Cells obtained from man or animal are grown in artificial culture in glass vessels in the Lab, Cells are living and metabolizing and can support viral replication. • Chick Embryo. Fertile chick eggs are used. • Lab. Animals. Mice Rabbits Ferrets and Monkeys
  • 23. THREE EFFECTS OF VIRUSES ON CELLS 1. Cell Death . The infection is lethal : it causes a cytopathic effect (CPE) which kills the cells. 2. Cell Transformation. The cell is transformed from a normal to a malignant or cancerous cell 3. Latent Infection . The virus remains within the cell in a potentially active state but produces no obvious effect on the cells function.
  • 24.
  • 25.
  • 26. THREE METHODS OF PENETRATION
  • 27.
  • 28.
  • 29.
  • 30. THREE TYPES OF VIRAL DISEASES Viruses are imp. and common cause of human disease especially in children. 1. Most are mild and patients makes a complete recovery. 2. Many infections are silent and the virus multiplies in the body without causing any symptoms. 3. Few are severe and always
  • 31.
  • 32.
  • 33.
  • 34.
  • 35. Host responses to viral infection: SPECIFIC IMMUNE RESPONSES (Adaptive Immunity) NON SPECIFIC DEFENSES (Innate Immunity) 1. Neutralizing antibody response 1. Interferon - alpha- interferon mainly, stimulated in surrounding cells 2. Cell-mediated responses (i.e., cytotoxic T lymphocytes) 2. Body fluids - stomach acid, tears 3. Complement- mediated lysis 3. Mechanical barriers - respiratory
  • 36.
  • 37.
  • 38. Acute infections: • 1.Hit and run infections. Characterized by the common cold viruses (rhinoviruses). • 2. Short incubation period (36 to 48 hours).
  • 39.
  • 40. Pathology in the upper respiratory tract due to epithelial cell killing and secondary invasion by normal flora of oral bacteria. Symptoms last for 5-7 days eliminated by the host. Protection not good since there are >1000 serotypes of rhinovirus. orthomyxoviruses, which include influenza A and B. Protection against subsequent infection may be poor because these viruses can change their antigenic profile of their surface proteins, e.g. hemagglutinin (HA) and neuraminidase (NA), by either point mutations (drift), or recombination, which results in a completely different gene (shift). (Influenza viruses are capable of antigenic shift because they have segmented single-stranded RNA genomes).
  • 41. Systemic infections. 1. Characterized by the common childhood diseases caused by measles, chickenpox, mumps, and rubella. 2. Incubation period is long - 14 to 21 days. There are two viremic phases during the incubation period: Replication at primary site ---- Primary viremia ---- replication in lymphoreticular system and viscera ---- Secondary viremia ---- target organs
  • 42.
  • 43.
  • 44.
  • 45.
  • 46.
  • 47.
  • 48.
  • 49. Several types of persistent viral infections exist: • Latent infections: After an acute cytocidal stage, the virus becomes latent. • The virus when latent does not replicate , produces limited mRNA. Latency may occur in non-dividing cells such as neurons (HSV I, HSV-II and VZV). • Chronic infections: Persistence of virus after acute phase with active replication of virus. May cause disease in normal individuals, e.g. hepatitis B, or not, e.g. JC and EBV. • Chronic infection with neoplasia: Transformation of virus infected cells usually after years of persistence, e.g. HTLV-I , HTLV-II, hepatitis B, Hep C, and HPV 16 and 18.
  • 50. • The outcome can change depending on the state of the individual, i.e. whether they become immunocompromised. • The site of viral persistence is important as it would be difficult to remain completely latent or with minimal viral transcription and translation in rapidly dividing cells such as those lining the small intestine. • Viral persistence requires viruses to develop ways to evade immune responses. Herpes
  • 51.
  • 52. Thank you & Remember Keep on alert for viruses around you, they can 1. transform you 2. have cyto- pathic effects on you 3. Stay latent inside you……………. ``And you can do nothing much about them…..so relax and keep going as best as you can.``

Editor's Notes

  1. ss
  2. Text books have been written on virology and one example of the victory of humans on an infectious disease is small ox, usually infection of child hood, can be mild to very deadly disease.Just a very brief and simple introduction to viral diseases in one small lecture is an impossible task to do. Which I will attempt by over simplyfying, and keeping the basic gacts intact, the basic core concepts, doing injustice to such important infectious agents.
  3. Text book on virology have been written , a important example of human conquering one disease fully has been small pox,
  4. A regular icosahedron has 60 rotational (or orientation-preserving) symmetries, and a symmetry order of 120 including transformations that combine a reflection and a rotation. A regular dodecahedron has the same set of symmetries, since it is the dual of the icosahedron. The set of orientation-preserving symmetries forms a group referred to as A5 (the alternating group on 5 letters), and the full symmetry group (including reflections) is the product A5 × C2. The latter group is also known as the Coxeter group H3
  5. Some virus leave tell tale signs or cause cell death which can be morphologically observed under the microscope in tissue culture or of different affected organs.