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Biotechnology and Genetic Engineering AP Biology Chapter 20
Terminology ,[object Object],[object Object],[object Object],[object Object]
Making recombinant DNA ,[object Object]
The DNA is cut using restriction enzymes
What are restriction enzymes? ,[object Object],[object Object]
How do they cut? STICKY ENDS B LUNT ENDS
[object Object],[object Object],[object Object]
[object Object],[object Object],There would be three pieces:  one 4 bases,  one 12 bases, and  one 5 bases .
Making recombinant DNA in plasmids
[object Object]
Genes can be cloned into vectors such as plasmids
Fig. 20-2 DNA of  chromosome Cell containing gene of interest Gene inserted into plasmid Plasmid put into bacterial cell Recombinant DNA ( plasmid ) Recombinant bacterium Bacterial chromosome Bacterium Gene of interest Host cell grown in culture to form a clone of cells containing the “cloned” gene of interest Plasmid Gene of Interest Protein expressed by gene of interest Basic research and various applications Copies of gene Protein harvested Basic research on gene Basic research on protein Gene for pest  resistance inserted  into plants Gene used to alter  bacteria for cleaning  up toxic waste Protein dissolves blood clots in heart attack therapy Human growth hor- mone treats stunted growth 2 4 1 3
Fig. 20-2a DNA of  chromosome Cell containing gene of interest Gene inserted into plasmid Plasmid put into bacterial cell Recombinant DNA (plasmid) Recombinant bacterium Bacterial chromosome Bacterium Gene of interest Plasmid 2 1 2
Fig. 20-2b Host cell grown in culture to form a clone of cells containing the “cloned” gene of interest Gene of Interest Protein expressed by gene of interest Basic research and various applications Copies of gene Protein harvested Basic research on gene Basic research on protein 4 Recombinant bacterium Gene for pest  resistance inserted  into plants Gene used to alter  bacteria for cleaning  up toxic waste Protein dissolves blood clots in heart attack therapy Human growth hor- mone treats stunted growth 3
Steps ,[object Object],[object Object],[object Object],[object Object],[object Object]
Nucleic Acid Hybridization ,[object Object],[object Object],[object Object],[object Object],[object Object]
 
 
The radioactive probe is made by determining a short segment of the protein sequence, then "back translating" to the possible DNA sequences.  Short DNA sequences are synthesized to match the  protein sequence.  Then these DNA oligomers (known as "oligos") are radiolabeled, and applied to the blotted clones.  They should hybridize only to clones containing sequence encoding the desired protein.
Expression of eukaryotic genes in prokaryotes ,[object Object],[object Object],[object Object]
What are YACS? ,[object Object],[object Object]
Electroporation ,[object Object]
 
PCR Polymerase Chain Reaction ,[object Object],[object Object],A Thermocycler
Steps of PCR? ,[object Object],[object Object],[object Object],[object Object],http:// www.dnalc.org/ddnalc/resources/shockwave/pcranwhole.html
 
[object Object]
Why is PCR used prior to cloning a gene in cells? ,[object Object]
Applications of PCR ,[object Object],[object Object],[object Object]
What is gel electrophoresis? ,[object Object],[object Object],[object Object],Gel Electrophoresis
 
 
Southern Blotting DNA Fingerprinting ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Southern Blotting
Sanger Sequencing ,[object Object],[object Object],[object Object],[object Object],Early DNA Sequencing
Analyzing Expression of Genes ,[object Object],[object Object]
[object Object]
[object Object],[object Object],[object Object],[object Object]
Determining Gene Function ,[object Object],[object Object]
Cloning Organisms ,[object Object]
In plants ,[object Object],[object Object]
In Animals ,[object Object],[object Object],[object Object]
Fig. 20-17 EXPERIMENT Less differ- entiated cell RESULTS Frog embryo Frog egg cell UV Donor nucleus trans- planted Frog tadpole Enucleated  egg cell Egg with donor nucleus  activated to begin  development Fully differ- entiated (intestinal) cell Donor  nucleus  trans- planted Most develop into tadpoles Most stop developing before tadpole stage
Nuclear Transplantation
And then Dolly came along in 1997
Fig. 20-18 TECHNIQUE Mammary cell donor RESULTS Surrogate mother Nucleus from mammary cell Cultured mammary cells Implanted in uterus of a third sheep Early embryo Nucleus removed Egg cell donor Embryonic development Lamb (“Dolly”) genetically identical to mammary cell donor Egg cell from ovary Cells fused Grown in culture 1 3 3 4 5 6 2
Why Dolly died young 6 yrs ,[object Object],[object Object]
[object Object],Rainbow CC CC and her  Surrogate mom
[object Object],[object Object]
Stem Cells ,[object Object],[object Object]
 
 
[object Object],[object Object],[object Object],[object Object]
Benefits of DNA technology ,[object Object],[object Object]
[object Object],[object Object],[object Object]
Fig. 20-21 Disease-causing allele DNA SNP Normal allele T C
Human Gene Therapy ,[object Object],[object Object],[object Object],[object Object]
Fig. 20-22 Bone marrow Cloned gene Bone marrow cell from patient Insert RNA version of normal allele into retrovirus. Retrovirus capsid Viral RNA Let retrovirus infect bone marrow cells that have been removed from the patient and cultured. Viral DNA carrying the normal allele inserts into chromosome. Inject engineered cells into patient. 1 2 3 4
Pharmaceutical Products ,[object Object],[object Object]
Fig. 20-23
Forensic Evidence and Genetic Profiles ,[object Object],[object Object]
Fig. 20-24 This photo shows Earl Washington just before  his release in 2001, after 17 years in prison. These and other STR data exonerated Washington and led Tinsley to plead guilty to the murder. (a) Semen on victim Earl Washington Source of  sample Kenneth Tinsley STR marker 1 STR marker 2 STR marker 3 (b) 17, 19 16, 18 17, 19 13, 16 12, 12 14, 15 11, 12 13, 16 12, 12
Environmental Cleanup ,[object Object],[object Object]
Genetic Engineering in Plants ,[object Object],[object Object]
[object Object],[object Object]
Fig. 20-25 Site where restriction enzyme cuts T DNA Plant with new trait Ti plasmid Agrobacterium tumefaciens DNA with the gene of interest Recombinant Ti plasmid TECHNIQUE RESULTS

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Biotechnology Ap

  • 1. Biotechnology and Genetic Engineering AP Biology Chapter 20
  • 2.
  • 3.
  • 4. The DNA is cut using restriction enzymes
  • 5.
  • 6. How do they cut? STICKY ENDS B LUNT ENDS
  • 7.
  • 8.
  • 10.
  • 11. Genes can be cloned into vectors such as plasmids
  • 12. Fig. 20-2 DNA of chromosome Cell containing gene of interest Gene inserted into plasmid Plasmid put into bacterial cell Recombinant DNA ( plasmid ) Recombinant bacterium Bacterial chromosome Bacterium Gene of interest Host cell grown in culture to form a clone of cells containing the “cloned” gene of interest Plasmid Gene of Interest Protein expressed by gene of interest Basic research and various applications Copies of gene Protein harvested Basic research on gene Basic research on protein Gene for pest resistance inserted into plants Gene used to alter bacteria for cleaning up toxic waste Protein dissolves blood clots in heart attack therapy Human growth hor- mone treats stunted growth 2 4 1 3
  • 13. Fig. 20-2a DNA of chromosome Cell containing gene of interest Gene inserted into plasmid Plasmid put into bacterial cell Recombinant DNA (plasmid) Recombinant bacterium Bacterial chromosome Bacterium Gene of interest Plasmid 2 1 2
  • 14. Fig. 20-2b Host cell grown in culture to form a clone of cells containing the “cloned” gene of interest Gene of Interest Protein expressed by gene of interest Basic research and various applications Copies of gene Protein harvested Basic research on gene Basic research on protein 4 Recombinant bacterium Gene for pest resistance inserted into plants Gene used to alter bacteria for cleaning up toxic waste Protein dissolves blood clots in heart attack therapy Human growth hor- mone treats stunted growth 3
  • 15.
  • 16.
  • 17.  
  • 18.  
  • 19. The radioactive probe is made by determining a short segment of the protein sequence, then "back translating" to the possible DNA sequences.  Short DNA sequences are synthesized to match the  protein sequence.  Then these DNA oligomers (known as "oligos") are radiolabeled, and applied to the blotted clones.  They should hybridize only to clones containing sequence encoding the desired protein.
  • 20.
  • 21.
  • 22.
  • 23.  
  • 24.
  • 25.
  • 26.  
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  • 31.  
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  • 33.
  • 34.
  • 35.
  • 36.
  • 37.
  • 38.
  • 39.
  • 40.
  • 41.
  • 42. Fig. 20-17 EXPERIMENT Less differ- entiated cell RESULTS Frog embryo Frog egg cell UV Donor nucleus trans- planted Frog tadpole Enucleated egg cell Egg with donor nucleus activated to begin development Fully differ- entiated (intestinal) cell Donor nucleus trans- planted Most develop into tadpoles Most stop developing before tadpole stage
  • 44. And then Dolly came along in 1997
  • 45. Fig. 20-18 TECHNIQUE Mammary cell donor RESULTS Surrogate mother Nucleus from mammary cell Cultured mammary cells Implanted in uterus of a third sheep Early embryo Nucleus removed Egg cell donor Embryonic development Lamb (“Dolly”) genetically identical to mammary cell donor Egg cell from ovary Cells fused Grown in culture 1 3 3 4 5 6 2
  • 46.
  • 47.
  • 48.
  • 49.
  • 50.  
  • 51.  
  • 52.
  • 53.
  • 54.
  • 55. Fig. 20-21 Disease-causing allele DNA SNP Normal allele T C
  • 56.
  • 57. Fig. 20-22 Bone marrow Cloned gene Bone marrow cell from patient Insert RNA version of normal allele into retrovirus. Retrovirus capsid Viral RNA Let retrovirus infect bone marrow cells that have been removed from the patient and cultured. Viral DNA carrying the normal allele inserts into chromosome. Inject engineered cells into patient. 1 2 3 4
  • 58.
  • 60.
  • 61. Fig. 20-24 This photo shows Earl Washington just before his release in 2001, after 17 years in prison. These and other STR data exonerated Washington and led Tinsley to plead guilty to the murder. (a) Semen on victim Earl Washington Source of sample Kenneth Tinsley STR marker 1 STR marker 2 STR marker 3 (b) 17, 19 16, 18 17, 19 13, 16 12, 12 14, 15 11, 12 13, 16 12, 12
  • 62.
  • 63.
  • 64.
  • 65. Fig. 20-25 Site where restriction enzyme cuts T DNA Plant with new trait Ti plasmid Agrobacterium tumefaciens DNA with the gene of interest Recombinant Ti plasmid TECHNIQUE RESULTS