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Application of Biotechnologies to
Improve the Quality of Rice and Wheat
Melissa Fitzgerald and Dara Daygon
School of Agriculture and Food Science
University of Queensland
Cluster of Trends
• Population growth
• Feeding the world
• Urbanisation
• Competition for land
• Resource Scarcity
• Climate Change
• Ecosystems in decline
• Water Scarce World
• Growing Middle Class
0
1000000
2000000
3000000
4000000
5000000
6000000
1940 1960 1980 2000 2020 2040 2060
Population('000)
Year
Africa
Asia
Europe
Latin America and
the Caribbean
Northern America
Oceania
thefuturescentre.org/
Increased Middle Class - $$
Population
Growth
Climate
Change
Middle
Classes
Confluence of Trend Clusters
BIOTECHNOLOGY SOLUTIONS
Biotechnology
Applies scientific and
engineering principles
to living organisms to
produce products of
value to society.
– Compounds
– Pathways
– Proteins
– Complex traits
understood
– Genes identified
Successful
application of
knowledge
High yielding plant than maintains
yield under stress, with nutritious
and delicious grains
If the gene is within the species
• Cross
• Use genotyping to maintain
background.
• Select progeny with most
background of desired parent,
and with gene.
• Backcross to ensure
recapturing genetic
background as well as
introgressed gene.
chr
Equipping the plant with a foreign gene
Transformation Genome Editing
Insertion of
the gene into
a host
genome
Golden Rice
• Equipped with a gene
to activate the
synthesis of beta
carotene.
• Biofortify the grain to
provide Vitamin A,
prevent blindness and
assist in cognitive
function.
Foreign genes not yet welcome
Greenpeace
Examples of biotech projects
Rice
• Submergence tolerance
• Drought resistance
• Disease resistance
• Herbicide tolerance
• Beta Carotene in grains
• High iron grains
• Folate in grains
• Low GI grains
• High RS in grains
Wheat
• Salinity tolerance
• Disease resistance
• Herbicide tolerance
• High iron grains
• Low GI in grains
• High RS in grains
• Gluten quality
Foreign genes
Identifying a major quality trait in rice
Objectives
• With a sensory panel, determine the descriptors
for quality jasmine rice
• Using metabolomics techniques, determine the
volatile compounds that associate with those
descriptors
• Using a panel of 400 diverse rices,ranging in
fragrance from weak to strong, identify QTLs for
the amount of 2AP and for the other compounds
of jasmine aroma.
Sensory profiling
• Sensory panel trained and
assessed aroma of many
rices – jasmine and non-
jasmine
• Used 10 descriptors
• Used standards to
determine strength of each
descriptor.
Volatile compounds from rice measured by
GCGCTOFMS
heat
flour
Cryogrind rice Volatilise compounds
by heating and
agitating
Separate compounds
on 2 columns, mass
and charge
Genotyping done by sequencing
Sensory descriptors clustered
Compounds
associating with
unpleasant aroma
Compounds
associating with
pleasant aroma
Important compounds
Good jasmine fragrance
• 2 acetyl 1 pyrroline
• 2 acetyl 1 pyrrole
• Pyrrole
• Analyte 4 – isomer 2AP
(5M6O234THP)
• Analyte 5- 1-pyrroline
• Limonene
• Acetoin
• Acetophenone
Nasty fragrance
• Indole
• Furans
• Ketones
• Thiols
• Sulphoxide
Delivering to Breeders
• Identified parents
carrying the QTLs for
high fragrance
• A panel of markers
converted to SNPs
enabling tracking of
the QTLs using new
SNP technology.
Remembering eating quality
Acknowledgements

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Application of biotechnologies in improving the quality of rice and wheat

  • 1. Application of Biotechnologies to Improve the Quality of Rice and Wheat Melissa Fitzgerald and Dara Daygon School of Agriculture and Food Science University of Queensland
  • 2.
  • 3. Cluster of Trends • Population growth • Feeding the world • Urbanisation • Competition for land • Resource Scarcity • Climate Change • Ecosystems in decline • Water Scarce World • Growing Middle Class 0 1000000 2000000 3000000 4000000 5000000 6000000 1940 1960 1980 2000 2020 2040 2060 Population('000) Year Africa Asia Europe Latin America and the Caribbean Northern America Oceania thefuturescentre.org/
  • 6. Biotechnology Applies scientific and engineering principles to living organisms to produce products of value to society. – Compounds – Pathways – Proteins – Complex traits understood – Genes identified Successful application of knowledge High yielding plant than maintains yield under stress, with nutritious and delicious grains
  • 7. If the gene is within the species • Cross • Use genotyping to maintain background. • Select progeny with most background of desired parent, and with gene. • Backcross to ensure recapturing genetic background as well as introgressed gene. chr
  • 8. Equipping the plant with a foreign gene Transformation Genome Editing Insertion of the gene into a host genome
  • 9. Golden Rice • Equipped with a gene to activate the synthesis of beta carotene. • Biofortify the grain to provide Vitamin A, prevent blindness and assist in cognitive function.
  • 10. Foreign genes not yet welcome
  • 12.
  • 13. Examples of biotech projects Rice • Submergence tolerance • Drought resistance • Disease resistance • Herbicide tolerance • Beta Carotene in grains • High iron grains • Folate in grains • Low GI grains • High RS in grains Wheat • Salinity tolerance • Disease resistance • Herbicide tolerance • High iron grains • Low GI in grains • High RS in grains • Gluten quality Foreign genes
  • 14.
  • 15. Identifying a major quality trait in rice
  • 16. Objectives • With a sensory panel, determine the descriptors for quality jasmine rice • Using metabolomics techniques, determine the volatile compounds that associate with those descriptors • Using a panel of 400 diverse rices,ranging in fragrance from weak to strong, identify QTLs for the amount of 2AP and for the other compounds of jasmine aroma.
  • 17. Sensory profiling • Sensory panel trained and assessed aroma of many rices – jasmine and non- jasmine • Used 10 descriptors • Used standards to determine strength of each descriptor.
  • 18. Volatile compounds from rice measured by GCGCTOFMS heat flour Cryogrind rice Volatilise compounds by heating and agitating Separate compounds on 2 columns, mass and charge
  • 19. Genotyping done by sequencing
  • 22. Important compounds Good jasmine fragrance • 2 acetyl 1 pyrroline • 2 acetyl 1 pyrrole • Pyrrole • Analyte 4 – isomer 2AP (5M6O234THP) • Analyte 5- 1-pyrroline • Limonene • Acetoin • Acetophenone Nasty fragrance • Indole • Furans • Ketones • Thiols • Sulphoxide
  • 23. Delivering to Breeders • Identified parents carrying the QTLs for high fragrance • A panel of markers converted to SNPs enabling tracking of the QTLs using new SNP technology.