INTRODUCTION
HISTORY
WHAT IS TRANSCRIPTION
PROKARYOTIC TRANSCRIPTION
STEPS OF TRANSCRIPTION
HOW TRANSCRIPTION OCCURS
PROCESS OF TRANSCRIPTION
Initiation
Elongation
Termination
CONCLUSION
REFRENCES
it describes transcription with simple diagram and animation. its steps and inhibitors are described for both eukaryotes and prokaryotes. it will be easily understood by UG students . post transcriptional modification of all the RNA are also described with diagrams.
The base sequence information present in the gene (DNA) is copied into an RNA molecule, which directly participates in protein synthesis and provides information for amino acid sequence of the protein. This RNA molecule is called messenger RNA or mRNA. The process of production of RNA copy of a DNA sequence is called transcription; this reaction is catalyzed by DNA-directed RNA polymerase, or simply RNA polymerase.
An Overview...
Definition of Translation.
Def. of Eukaryotes.
Translation: An Overview.
Components of Translation.
Some Enzymes .
Ribosome Role.
Mechanism of Translation.
Initiation.
Scanning Model of Initiation.
Initiation Factors.
Animation.
Elongation.
Chain Elongation: Translocation.
Animation.
Termination.
Animation....
It's not perfect still... what are your views friends?
it describes transcription with simple diagram and animation. its steps and inhibitors are described for both eukaryotes and prokaryotes. it will be easily understood by UG students . post transcriptional modification of all the RNA are also described with diagrams.
The base sequence information present in the gene (DNA) is copied into an RNA molecule, which directly participates in protein synthesis and provides information for amino acid sequence of the protein. This RNA molecule is called messenger RNA or mRNA. The process of production of RNA copy of a DNA sequence is called transcription; this reaction is catalyzed by DNA-directed RNA polymerase, or simply RNA polymerase.
An Overview...
Definition of Translation.
Def. of Eukaryotes.
Translation: An Overview.
Components of Translation.
Some Enzymes .
Ribosome Role.
Mechanism of Translation.
Initiation.
Scanning Model of Initiation.
Initiation Factors.
Animation.
Elongation.
Chain Elongation: Translocation.
Animation.
Termination.
Animation....
It's not perfect still... what are your views friends?
If you were looking at an mRNA and saw the codon AUG, what would you .pdfnaveenkumar29100
If you were looking at an mRNA and saw the codon AUG, what would you conclude about it?
What does it mean to that the genetic code is redundant, but not ambiguous? The genetic code is
nearly universal, meaning the same RNA codon that designates tryptophan in humans, designates
tryptophan in bacteria. a. What has this knowledge allowed us to conclude about the code? b.
What has this knowledge allowed us to do with genes Transcription is the DNA-directed
synthesis of RNA: a closer look Describe the general model of transcription. Include in your
answer the steps of transcription and the key elements of each step. Compare and contrast
transcription between prokaryotes and eukaryotes What makes RNA polymerase start
transcribing in a gene at the right place on the DNA of a prokaryotic cell? What makes RNA
polymerase start transcribing in a gene at the right place on the DNA of a eukaryotic cell?
Solution
A)Transcription is the first step in gene expression. It involves copying a gene\'s DNA sequence
to make an RNA molecule.Transcription can be divided into four distinct stages:
Template recognition
Initiation
Elongation
Termination
Initiation:RNA polymerase binds to a sequence of DNA called the promoter,found near the
beginning of a gene.Each gene has its own promoter.Once bound,RNA polymerase separates the
DNA strands,providing the single-stranded template needed for transcription.
Elongation:One strand of DNA,the template strand,acts as a template for RNA polymerase.As it
reads this template one base at a time,the polymerase builds an RNA molecule out of
complementary nucleotides,making a chain that grows from 5\' to 3\'.The RNA transcript carries
the same information as the non-template (coding) strand of DNA,but it contains the base uracil
instead of thymine .
Termination:Sequences called terminators signal that the RNA transcript is complete.Once they
are transcribed,they cause the transcript to be released from the RNA polymerase.
B)Prokaryotes do not have an organized nucleus,so the nuclear materials or DNA is in the
cytoplasm.Therefore,the transcription occurs in the cytoplasm and all the precursors needed for
the transcription are found in the cytoplasm.Prokaryotic transcription requires the RNA
polymerase enzyme in order for the transcription to be successfully completed.The enzyme binds
to the sigma factor and the promoter region,and then initiate the transcription by completing the
holoenzyme.In prokaryotes,DNA is not bound to histones.Thus,the transcription initiates
directly.This could be advantageous when prokaryotes have overlapping genes.Transcription
starts at the promoter region and elongate through the coding region and ends when the RNA
polymerase reads the termination signal.There are two types of termination signals,Rho-
dependent and independant.Transcribed mRNA will be completely translated during the
transcription,and no post-transcription processing will be undergoing most of the
time.Transcriptionl unit has one or more .
The process by which an RNA copy of a gene is made or it’s a DNA dependent RNA synthesis.
Transcription resembles replication
In its fundamental chemical mechanism
Its polarity (direction of synthesis)
Its use of a template
Transcription differs from replication
It does not requires a primer
It involves only limited segments of a DNA molecule
Within transcribed segments only one DNA strand serves as a template for synthesis of RNA.
Prokaryotic transcription: Promoters, Structure and Functionowaisyousf002
This PowerPoint presentation offers a comprehensive exploration of transcription processes in prokaryotic organisms. It covers the fundamental mechanisms of transcription, including initiation, elongation, and termination phases. Key topics include the role of RNA polymerase, promoter recognition, sigma factors, and regulatory sequences.
A hyperlinked and animated PowerPoint presentation on DNA transcription, its stages, units, etc.
Hope you will like it.
Please do share with your friends
Protein synthesis is the process whereby biological cells generate new proteins. Translation, the assembly of amino acids by ribosomes, is an essential part of the biosynthetic pathway, along with generation of messenger RNA (mRNA), aminoacylation of transfer RNA (tRNA), co-translational transport, and post-translational modification. Protein biosynthesis is strictly regulated at multiple steps. They are principally during transcription (phenomenon of RNA synthesis from DNA template) and translation (phenomenon of amino acid assembly from RNA). The cistron DNA is transcribed into the first of a series of RNA intermediates. The last version is used as a template in synthesis of a polypeptide chain. Protein will often be synthesized directly from genes by translating mRNA. A proprotein is an inactive protein containing one or more inhibitory peptides that can be activated when the inhibitory sequence is removed by proteolysis during post translational modification. A preprotein is a form that contains a signal sequence (an N-terminal signal peptide) that specifies its insertion into or through membranes, i.e., targets them for secretion. The signal peptide is cleaved off in the endoplasmic reticulum. Preproteins have both sequences (inhibitory and signal) still present. In protein synthesis, a succession of tRNA molecules charged with appropriate amino acids are brought together with an mRNA molecule and matched up by base-pairing through the anti-codons of the tRNA with successive codons of the mRNA. The amino acids are then linked together to extend the growing protein chain, and the tRNAs, no longer carrying amino acids, are released. This whole complex of processes is carried out by the ribosome, formed of two main chains of RNA, called ribosomal RNA (rRNA), and more than 50 different proteins. The ribosome latches onto the end of an mRNA molecule and moves along it, capturing loaded tRNA molecules and joining together their amino acids to form a new protein chain.
MOLECULAR GENETICS : PROKARYOTIC TRANSCRIPTION OR RNA SYNTHESIS BY DNA DEPEN...Amritha S R
The process of conversion of DNA to RNA or genome to transcriptome is called transcription. Central dogma of life or molecular biology both with pre-bioinformatics era & bioinformatics era is shown in flow chart. All the 3 stages of transcription i.e; initiation, elongation & termination are explained in this presentation. Information regarding DNA dependent RNA polymarase along with core enzyme & sigma factor is given in pictorial representation. The promoter sequence, hair-pin loop, Rho factor dependent & independent termination of transcription,post transcriptional modification of prokaryotic transcription before entering translation is also explained in detail.
Introduction
History
Tumor suppressor gene- pRB
- RB gene
- Role of RB in regulation of cell cycle
- Tumor associated with RB gene mutation
Tumor suppressor gene- p53
- What is p53 gene?
- Function of p53 gene
- How it regulates cell cycle
- What happen if p53 gene inactivated
- Cancer associated with p53 mutation
- Conclusion
- References
Introduction
Definition
History
Two hit hypothesis
Functions
Mutation in tumor suppressor genes
What is mutation
Inherited mutation of TSGs
Acquired mutation of TSGs
What is Oncogenes?
TSGs and Oncogenes : Brakes and accelerators
Stop and go signal
Examples of TSGs:
RB-The retinoblastoma gene
P53 protein
TSGs &cell suicide
Conclusion
References
Introduction
Protein synthesis
Synthesis of secretory proteins on membrane-bound ribosomes
Processing of newly synthesized proteins in the ER
Synthesis of integral membrane protein on membrane bound ribosomes
Maintenance of membrane asymmetry
Conclusion
Reference
Introduction
Definition
Factors required for Translation
Formation of aminoacyl t-RNA
1)Activation of amino acid
2) Transfer of amino acid to t-RNA
Translation involves following steps:-
1)Initiation
2)Elongation
3)Termination
Conclusion
Reference
Introduction
Definition
History
central dogma
Major components
mRNA,tRNA,rRNA
Energy source
Amino acids
Protien factor
Enzymes
Inorganic ions
Step involves in translation:
Aminoacylation of tRNA
Initiation
Elongation
termination
Importance of translation
Conclusion
Reference
Introduction
Protein modifications
Folding
Chaperon mediated
Enzymatic
Cleavage
Addition of functional groups
Chemical groups
Hydrophobic groups
Proteolysis
Conclusion
Reference
Enzyme Kinetics and thermodynamic analysisKAUSHAL SAHU
Introduction
Kinetics and thermodynamicSG
Thermodynamic in enzymatic reactions
balanced equations in chemical reactions
changes in free energy determine the direction & equilibrium state of chemical reactions
the rates of reactions
Factors effecting enzymatic activity
(i) Enzyme concentration.
(ii) Substrate concentration.
(iii)Temperature
(iv) pH.
(v) Activators.
(vi)Inhibitors
Michaelis-menten equation
CONCLUSIONS
REFERENECES
Recepter mediated endocytosis by kk ashuKAUSHAL SAHU
INTRODUCTION
DEFINITION OF RECEPTOR MEDIATED ENDOCYTOSIS
WHAT TYPE OF LIGANDS ENTER BY RME?
FORMATION OF CLATHRIN-COATED VESICLES
TRISKELIONS
ROLE OF DYNAMIN IN THE FORMATION OF CLATHRIN-COATED VESICLES
ROLE OF PHOSPHOLIPIDS IN THE FORMATION OF COATED VESICLES
ENDOCYTIC PATHWAY
LDLs AND CHOLESTROL METABOLISM
CONCLUSION
REFERENCES
The delivery of newly synthesized protein to their proper cellular destination, usually referred to as protein targeting or sorting.
The mode of protein transport depends chiefly on the location in the cell cytoplasm of the polysomes involved in protein synthesis.
There are two modes of protein sorting:-
1) Co - translational Transportation.
2) Post - translational Transportation.
Prokaryotic translation machinery by kk KAUSHAL SAHU
Introduction
Definition
Factors required for Translation
Formation of aminoacyl t-RNA
1)Activation of amino acid
2) Transfer of amino acid to t-RNA
Translation involves following steps:-
1)Initiation
2)Elongation
3)Termination
Conclusion
Reference
INTRODUCTION.
HISTORY.
PROCESS OF TRANSCRIPTION.
STAGES OF TRANSCRIPTION.
ENZYME INVOLVES IN TRANSCRIPTION.
TERMINATION.
PROKARYOTES.
Transcription terminators.
EUKARYOTES.
Two models for termination.
CONCLUSION.
REFERENCES.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
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Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
2. INTRODUCTION
HISTORY
WHAT IS TRANSCRIPTION
PROKARYOTIC TRANSCRIPTION
STEPS OF TRANSCRIPTION
HOW TRANSCRIPTION OCCURS
PROCESS OFTRANSCRIPTION
Initiation
Elongation
Termination
CONCLUSION
REFRENCES
PROKARYOTIC TRANSCRIPTION
3. Transcription is the flow of an information
process from DNA to RNA and from RNA to
protein. It is the process of creating
a complementary RNA copy of a sequence
of DNA.
. During transcription, a DNA sequence is
read by an RNA polymerase, which produces
a complementary, antiparallel RNA strand.
PROKARYOTIC TRANSCRIPTION
4. A molecule that allows the genetic material
to be realized as a protein was first
hypothesized by François Jacob and Jacques
Monod. RNA synthesis by RNA polymerase
was established in vitro by several
laboratories by 1965.
PROKARYOTIC TRANSCRIPTION
5. DNA transcription is a process that involves
the transcribing of genetic information
from DNA to RNA.The transcribed DNA
message is used to produce proteins.
DNA is housed within the nucleus of
our cells.
It controls cellular activity by coding for the
production of enzymes and proteins.
6. RNA polymerase binds to DNA.
RNA polymerase transcribes a single
strand of DNA into a single stranded
RNA polymer called messenger RNA
(mRNA).
RNA polymerase releases the mRNA
polymer and detaches from the DNA.
PROKARYOTIC TRANSCRIPTION
7. Prokaryotic transcription is the process in
which messenger RNA transcripts of genetic
material in prokaryotes are produced, to be
translated for the production of proteins.
10. It completes in 3 steps:-
Initiation
Elongation
Termination
11. At the start of initiation,
the core enzyme is
associated with a sigma
factor that aids in finding
the appropriate -35 and -10
base pairs downstream of
promoter sequences.
RNA polymerase (RNAP)
binds to one of several
specificity factors, σ, to
form a holoenzyme
In this form, it can
recognize and bind to
specific promoter regions
in the DNA.
PROKARYOTIC TRANSCRIPTION
12. The DNA is unwound and becomes
single-stranded ("open") in the
vicinity of the initiation site (defined
as +1).This holoenzyme/unwound-
DNA structure is called the open
complex.
The RNA polymerase transcribes the
DNA (the beta subunit initiates the
synthesis), but produces about 10
abortive (short, non-productive)
transcripts which are unable to leave
the RNA polymerase because the
exit channel is blocked by the σ-
factor.
The σ-factor eventually dissociates
from the holoenzyme, and
elongation proceeds.
PROKARYOTIC TRANSCRIPTION
13. As transcription
proceeds, RNA
polymerase traverses
the template strand
and uses base pairing
complimentarily with
the DNA template to
create an RNA copy
PROKARYOTIC TRANSCRIPTION
15. It uses a termination
factor called ρ factor(rho
factor) which is a protein to
stop RNA synthesis at specific
sites.
This protein binds at a rho
utilisation site on the nascent
RNA strand and runs along
the mRNA towards the RNAP.
A stem loop structure
upstream of the terminator
region pauses the RNAP,
when ρ-factor reaches the
RNAP, it causes RNAP to
dissociate from the DNA,
terminating transcription
PROKARYOTIC TRANSCRIPTION
16. Transcription is a flow of information from
DNA to RNA and from RNA to protein.The
information in DNA is not directly converted
into proteins, but must first be copied into
RNA.This ensures that the information
contained within the DNA does not become
tainted. . It controls cellular activity by coding
for the production of enzymes and proteins.
PROKARYOTIC TRANSCRIPTION