INTRODUCTION:
Hybrid Orbitals
Developed by Linus Pauling, the concept of hybrid orbitals was a theory created to explain the structures of molecules in space. The theory consists of combining atomic orbitals (ex: s,p,d,f) into new hybrid orbitals (ex: sp, sp2, sp3).
Hyperconjugation is the donation of a sigma bond into an adjacent empty or partially filled p orbital, which results in an increased stability of the molecule.
Contributed by: Samuel Redstone (Undergraduate), University of Utah, 2016
Hyperconjugation is the donation of a sigma bond into an adjacent empty or partially filled p orbital, which results in an increased stability of the molecule.
Contributed by: Samuel Redstone (Undergraduate), University of Utah, 2016
Hybridization describes the bonding atoms from an atom's point of view. For a tetrahedral coordinated carbon (e.g. methane CH4), the carbon should have 4 orbitals with the correct symmetry to bond to the 4 hydrogen atoms.
HSAB concept is an initialism for "hard and soft (Lewis) acids and bases". Also known as the Pearson acid-base concept, HSAB is widely used in chemistry for explaining stability of compounds, reaction mechanisms and pathways.
It is about molecular orbital theory specially mo diagram of diatomic atoms,their bond orders,bond lengths and stability and experimental evidences of ionisation energy from PES.
Electrochemistry,Electrolytic and Metallic Conduction,Specific Resistance or resistivity (ρ),Specific Conductance or Conductivity (κ),Equivalent Conductance (Λ), Molar Conductance (Λm),Variation of Conductance with Dilution,Debye-Hückel-Onsager Equation,Kohlransch’s Law of Independent Migration of Ions,Faraday’s Laws of Electrolysis,Electrochemical Cells,The Nernst Equation,Oxidation Number
Oxidation Number / State Method For Balancing Redox Reactions,Half-Reaction or Ion-Electron Method For Balancing Redox Reactions,Half-Reaction or Ion-Electron Method For Balancing Redox Reactions,Common Oxidising and Reducing Agents
The chemical Bond: Electronic concept of valency. Different types of chemical bond e.g. ionic, covalent, coordinate covalent metallic, dipole, hydrogen bond etc. Theories of covalent bonding and hybridization.
Organic reactions are chemical reactions involving organic compounds. Organic reactions are used in the construction of new organic molecules. The production of many man-made chemicals such as drugs, plastics, food additives, fabrics depend on organic reactions.
Hybridization describes the bonding atoms from an atom's point of view. For a tetrahedral coordinated carbon (e.g. methane CH4), the carbon should have 4 orbitals with the correct symmetry to bond to the 4 hydrogen atoms.
HSAB concept is an initialism for "hard and soft (Lewis) acids and bases". Also known as the Pearson acid-base concept, HSAB is widely used in chemistry for explaining stability of compounds, reaction mechanisms and pathways.
It is about molecular orbital theory specially mo diagram of diatomic atoms,their bond orders,bond lengths and stability and experimental evidences of ionisation energy from PES.
Electrochemistry,Electrolytic and Metallic Conduction,Specific Resistance or resistivity (ρ),Specific Conductance or Conductivity (κ),Equivalent Conductance (Λ), Molar Conductance (Λm),Variation of Conductance with Dilution,Debye-Hückel-Onsager Equation,Kohlransch’s Law of Independent Migration of Ions,Faraday’s Laws of Electrolysis,Electrochemical Cells,The Nernst Equation,Oxidation Number
Oxidation Number / State Method For Balancing Redox Reactions,Half-Reaction or Ion-Electron Method For Balancing Redox Reactions,Half-Reaction or Ion-Electron Method For Balancing Redox Reactions,Common Oxidising and Reducing Agents
The chemical Bond: Electronic concept of valency. Different types of chemical bond e.g. ionic, covalent, coordinate covalent metallic, dipole, hydrogen bond etc. Theories of covalent bonding and hybridization.
Organic reactions are chemical reactions involving organic compounds. Organic reactions are used in the construction of new organic molecules. The production of many man-made chemicals such as drugs, plastics, food additives, fabrics depend on organic reactions.
In chemistry, hybridisation (or hybridization) is.pdfsutharbharat59
In chemistry, hybridisation (or hybridization) is the concept of mixing atomic
orbitals to form new hybrid orbitals suitable for the qualitative description of atomic bonding
properties. Hybridised orbitals are very useful in the explanation of the shape of molecular
orbitals for molecules. It is an integral part of valence bond theory. Although sometimes taught
together with the valence shell electron-pair repulsion (VSEPR) theory, valence bond and
hybridization are in fact not related to the VSEPR model.[1] Contents [hide] 1 Historical
development 2 Types of hybridisation 2.1 sp3 hybrids 2.2 sp2 hybrids 2.3 sp hybrids 3
Hybridisation and molecule shape 3.1 Explanation of the shape of water 3.2 Controversy
regarding d-orbital participation 4 Hybridisation theory vs. MO theory 5 See also 6 External
links 7 References [edit]Historical development Chemist Linus Pauling first developed the
hybridisation theory in order to explain the structure of molecules such as methane (CH4).[2]
This concept was developed for such simple chemical systems, but the approach was later
applied more widely, and today it is considered an effective heuristic for rationalizing the
structures of organic compounds. For quantitative calculations of electronic structure and
molecular properties, hybridisation theory is not as practical as molecular orbital theory.
Problems with hybridisation are especially notable when the d orbitals are involved in bonding,
as in coordination chemistry and organometallic chemistry. Although hybridisation schemes in
transition metal chemistry can be used, they are not generally as accurate. Orbitals are a model
representation of the behaviour of electrons within molecules. In the case of simple
hybridisation, this approximation is based on atomic orbitals, similar to those obtained for the
hydrogen atom, the only atom for which an exact analytic solution to its Schrödinger equation is
known. In heavier atoms, like carbon, nitrogen, and oxygen, the atomic orbitals used are the 2s
and 2p orbitals, similar to excited state orbitals for hydrogen. Hybridised orbitals are assumed to
be mixtures of these atomic orbitals, superimposed on each other in various proportions. The
theory of hybridisation is most applicable under these assumptions. It gives a simple orbital
picture equivalent to Lewis structures. Hybridisation is not required to describe molecules, but
for molecules made up from carbon, nitrogen and oxygen (and to a lesser extent, sulfur and
phosphorus) the hybridisation theory/model makes the description much easier. The
hybridisation theory finds its use mainly in organic chemistry. Its explanation starts with the way
bonding is organized in methane. [edit]Types of hybridisation [edit]sp3 hybrids Hybridisation
describes the bonding atoms from an atom\'s point of view. That is, for a tetrahedrally
coordinated carbon (e.g., methane, CH4), the carbon should have 4 orbitals with the correct
symmetry to bond to the 4 hydrogen atoms. The .
Food hygiene is more than cleanliness ......
Protecting food from risk of contamination, including harmful bacteria, poison and other foreign bodies.
Preventing any bacteria present multiplying to an extent which would result in the illness of consumers or the early spoilage of the food.
Destroying any harmful bacteria in the food by thorough cooking
or processing.
Discarding unfit or contaminated food.
T-Cell Activation
• Concept of immune response
• T cell-mediated immune response
• B cell-mediated immune response
I. Concept of immune response
• A collective and coordinated response to the introduction of foreign substances in an individual mediated by the cells and molecules in the immune system.
II. T cell-mediated immune response
• Cell-mediated immunity is the arm of the adaptive immune response whose role is to combat infection of intracellular pathogens, such as intracellular bacteria (mycobacteria, listeria monocytogens), viruses, protozoa, etc.
Major Histocompatibility Complex
MHC:
• Major Histocompatibility Complex
– Cluster of genes found in all mammals
– Its products play role in discriminating self/non-self
– Participant in both humoral and cell-mediated immunity
• MHC Act As Antigen Presenting Structures
• In Human MHC Is Found On Chromosome 6
– Referred to as HLA complex
• In Mice MHC Is Found On Chromosome 17
– Referred to as H-2 complex
• Genes Of MHC Organized In 3 Classes
– Class I MHC genes
• Glycoproteins expressed on all nucleated cells
• Major function to present processed Ags to TC
– Class II MHC genes
• Glycoproteins expressed on macrophages, B-cells, DCs
• Major function to present processed Ags to TH
– Class III MHC genes
• Products that include secreted proteins that have immune functions. Ex. Complement system, inflammatory molecules
Antigen Processing and Presentation MID
Antigens and “foreignness”
• Antigens (or, more properly, immunogens) have a series of features which confer immunogenicity.
• One of these features is “foreignness.”
• So, we can infer that – most often – antigens – ultimately – originate externally.
• (There are exceptions, of course. Some cells become transformed by disease [e. g., cancer] or by aging. In such instances, the antigens have an internal origin.)
Extinction of a particular animal or plant species occurs when there are no more individuals of that species alive anywhere in the world - the species has died out. This is a natural part of evolution. But sometimes extinctions happen at a much faster rate than usual. Natural Causes of Extinction.
Difference between In-Situ and Ex-Situ conservation
Conservation of biodiversity and genetic resources helps protect, maintain and recover endangered animal and plant species. There are mainly two strategies for the conservation of wildlife: In-situ conservation and Ex-situ conservation. Although, both the strategies aim to maintain and recover endangered species, they are different from each other. Let us see how they differ from each other!
Evolution Of Bacteria
Bacteria have existed from very early in the history of life on Earth. Bacteria fossils discovered in rocks date from at least the Devonian Period (419.2 million to 358.9 million years ago), and there are convincing arguments that bacteria have been present since early Precambrian time, about 3.5 billion years ago. Bacteria were widespread on Earth at least since the latter part of the Paleoproterozoic, roughly 1.8 billion years ago, when oxygen appeared in the atmosphere as a result of the action of the cyanobacteria. Bacteria have thus had plenty of time to adapt to their environments and to have given rise to numerous descendant forms.
Impact of Environment on Loss of Genetic Diversity and Speciation
Genetic variation describes naturally occurring genetic differences among individuals of the same species. This variation permits flexibility and survival of a population in the face of changing environmental circumstances. Consequently, genetic variation is often considered an advantage, as it is a form of preparation for the unexpected. But how does genetic variation increase or decrease? And what effect do fluctuations in genetic variation have on populations over time?
GENE ENVIRONMENT INTERACTION
Subtle differences in one person’s genes can cause them to respond differently to the same environmental exposure as another person. As a result, some people may develop a disease after being exposed to something in the environment while others may not.
As scientists learn more about the connection between genes and the environment, they pursue new approaches for preventing and treating disease that consider individual genetic codes.
How to store food in hot
The Good News
To maximize benefit of preservation, keep your food as fresh as possible for as long as possible. You can do this, even in the heat, by creating a “cooler” made from two basic terra cotta pots, one larger than the other. Put the smaller pot in the larger one, fill the gap with sand, and saturate the sand with water. Then cover it with a cloth. To add additional insulation from the heat, bury the pot up to its rim. The evaporation of moisture from the wet sand will cool the air around the food and help keep it fresh.
What is IUPAC naming?
In order to give compounds a name, certain rules must be followed. When naming organic compounds, the IUPAC (International Union of Pure and Applied Chemistry) nomenclature (naming scheme) is used. This is to give consistency to the names. It also enables every compound to have a unique name, which is not possible with the common names used (for example in industry). We will first look at some of the steps that need to be followed when naming a compound, and then try to apply these rules to some specific examples.
IUPAC Nomenclature
IUPAC nomenclature uses the longest continuous chain of carbon atoms to determine the basic root name of the compound. The root name is then modified due to the presence of different functional groups which replace hydrogen or carbon atoms in the parent structure.
1. Why Firefly give light during night?
2. Why atomic mass and Atomic numbers are given to elements ?
3. Why elements have been characterized and classified into different groups?
4. What is the transition of elements and what they play their role in elements stability?
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
The ASGCT Annual Meeting was packed with exciting progress in the field advan...
Hybridization
1. INTRODUCTION:
Hybrid Orbitals
Developed by Linus Pauling, the concept of hybrid orbitals was a theory
created to explain the structures of molecules in space. The theory consists of
combining atomic orbitals (ex: s,p,d,f) into new hybrid orbitals (ex: sp, sp2
, sp3
).
VOCABULARY:
1. Atomic orbital: an expected region of electron density around an atom based
on a solution to the Schrödinger wave function. 1
Example: The valence electrons of
Be will most probably be
found in the shaded areas.
2. Hybridization: the combining of solutions to the Schrodinger wave function
for atomic orbitals to produce hybrid orbitals. Note: the total number of
orbitals availablefor forming bonds does not change—a new set is simply
formed. 2
3. Hybrid orbital: an orbital created by the combination of atomic orbitals in
the same atom. 1
Example: + =
2s 2pz sp hybrid
4. Linear sp hybrids: the two hybrid orbitals formed by the mixture of one s
and one p orbital. 1
5. Trigonal sp2
hybrids: the three hybrid orbitals formed by the mixture of one
s and two p orbitals. 1
6. Tetrahedral sp3
hybrids: the four hybrid orbitals formed by the mixture of
one s and three p orbitals. 1
DETERMINING HYBRIDIZATION OF ATOMS:
To determine the hybridization of an atom, count the regions of electron
density (bonds and lone pairs) around the atom and match this number with
the corresponding hybridization. (Note: this technique does not take into
account the changed hybridization that occurs when a molecule is
2. conjugated—this will be discussed under “Note on Conjugation and
Hybridization,” because it must always be taken into account to identify the
more accurate hybridization)
o An sp hybridized atom has two regions of electron density - Consider the
carbon atom of HCN:
H C N:
It is important to note that a double or triple bond only counts as ONE
region of electron density; the carbon of the HCN therefore has two
regions of electron density.
o An sp2
hybridized atom has three regions of electron density: Consider
the sulfur of SO2
o An sp3
hybridized atom has four regions of electron density: Consider
the oxygen atom of water
o This same pattern applies for the hybrid orbitals containing d orbitals
(dsp3
, d2
sp3
), but organic chemistry focuses on carbon, which is limited
to four bonds/regions of electron density.
DETERMINING GEOMETRY:
Geometry determines hybridization; the geometry of a molecule will be the most
energetically favorable arrangement, and this geometry will cause hybridization to
accommodate the correct shape.
3. sp hybrids: Linear Structures:
o sp hybrids share characteristics evenly between s and p orbitals. The
other unhybridized p orbitals remain the same. The front lobes of the sp
orbitals point in opposite directions (at 180°). The back lobes also point in
opposite directions. A linear structure is created.
o In general: The overlap of the lobes of atoms creates bonds; large front
lobes overlap more completely, resulting in a relatively stronger bond.
sp2
hybrids: Trigonal Structures:
o The small amount of energy needed to promote an electron from the 2s
to one of the 2p levels is compensated by bond formation. The three
filled atomic orbitals mix to form three sp2
orbitals—each is of 33% s
character and 67% p character. The last p orbital stays the same. The
front lobes (and their corresponding back lobes) face in opposite
directions (at 120° from each other). Electron repulsion therefore
creates a trigonal planar geometry.
sp3
hybrids: Tetrahedral structures:
o The 2s orbital is mixed with all three of the 2p orbitals, creating four
hybridized sp3
orbitals. Each of these has 25% s and 75% p character;
electron repulsion favors a tetrahedral shape, so the orbitals are 109.5°
apart from each other.
2pz
o Hybrid orbitals can overlap with any atomic orbital of a different atom to
form a bond; this is seen with the substitution of a chlorine atom in place
4. : :
. .
of a hydrogen atom on methane. They may also contain lone pairs—this
explains the geometry of water, which is sp3
hybridized due to the lone
pair, which occupies one of the four hybrid orbitals. Again, the bond angle
is slightly distorted due to the electron repulsion of this lone pair.
o Bond angles are distorted because of these changes; typical bond angles
of certain hybridization are often increased or decreased due to the
relative electronegativities of atoms on a molecule.
Note on Conjugation and Hybridization:
To accommodate resonance, the hybridization of an atom may change. This
change will occur due to the movement of a lone pair into a p orbital, and
must be taken into consideration when determining the hybridization of
atoms in a molecule. Hybridization will change if:
o The atom is surrounded by two or more adjacent p orbitals.
o The atom has a lone pair to move into a p orbital.
Amide molecule—nitrogen looks sp3
hybridized but it is sp2
because of conjugation
(lone pair goes into a p orbital to have three adjacent, parallel p orbitals).