The document discusses the Hammett plot, which is a linear free-energy relationship analysis used to model the electronic effects of substituents on aromatic systems. It describes how σ values are derived from ionization reactions to indicate whether a substituent is electron-donating or electron-withdrawing. These σ values can then be used to analyze reaction mechanisms and optimize reaction conditions for similar processes. Examples are given of how split Hammett plots reveal changing mechanisms depending on the electronic nature of the substituent. Problems involving interpreting ρ values in Hammett plots to determine reaction pathways are also presented.
THE PRODRUG DESIGNING FOR NEW SELECTION AND FORMULATION OF DRUG COMPATIBLE WITH API I.E. ACTIVE PHARMACUTICAL INGREDIENT, AND ITS EFFECT WHICH SHOULD BE 0. THE DRUG COMBINED WITH API AND AVILABLE IN MARKET AND DRUGS NEED TO BE COMBINE ARE ALSO DISCUSSED WITH ITS STRUCTURE AND SAR, AND COVERED AS PER THE SYLLABUS OF PCI.
In this slide I covered the detailed about hansch analysis, Free-Wilson analysis, and Mixed approach. I also gave a detailed application for each points.
SAR versus QSAR, History and development of QSAR, Types of physicochemical
parameters, experimental and theoretical approaches for the determination of
physicochemical parameters such as Partition coefficient, Hammet’s substituent
constant and Taft’s steric constant. Hansch analysis, Free Wilson analysis, 3D-QSAR
approaches like COMFA and COMSIA.
THE DRUG DESIGN AND DEVELOPMENT BASED ON DRUG DISCOVERY ,HERE ITS NEED RATIONALE ARE EXPLAINED ALSO QSAR, MOLECULAR DOCKING ITS HISTORY NEED, STRUCTURE BASED DRUG DESIGN IN EASY WAY WE HAVE MENTIONED. THIS WILL MAKE READERS EASY TO COLLECT DATA AT A PLACE ALL OVER THIS IS FOR PHARMA STUDENTS, ACADEMICS, PROFESSIONL AND OST USEFUL FOR RESEARCHERS.
THANK YOU
HOPE YOU WILL LIKE AND SHARE
This powerpoint presentation will help to know about introduction of bioisosterism by Biotechnology point of view. Hope this powerpoint presentation will your reference.
An inductive effect occurs when the electrons shared between two atoms or groups of different electronegativities are withdrawn to the more electronegative atom or group through the σ bond resulting in a separation of charge, or dipole.
Contributed by: Colin Swenson and Tewoderos Ayele (Undergraduates)
University of Utah, 2015
THE PRODRUG DESIGNING FOR NEW SELECTION AND FORMULATION OF DRUG COMPATIBLE WITH API I.E. ACTIVE PHARMACUTICAL INGREDIENT, AND ITS EFFECT WHICH SHOULD BE 0. THE DRUG COMBINED WITH API AND AVILABLE IN MARKET AND DRUGS NEED TO BE COMBINE ARE ALSO DISCUSSED WITH ITS STRUCTURE AND SAR, AND COVERED AS PER THE SYLLABUS OF PCI.
In this slide I covered the detailed about hansch analysis, Free-Wilson analysis, and Mixed approach. I also gave a detailed application for each points.
SAR versus QSAR, History and development of QSAR, Types of physicochemical
parameters, experimental and theoretical approaches for the determination of
physicochemical parameters such as Partition coefficient, Hammet’s substituent
constant and Taft’s steric constant. Hansch analysis, Free Wilson analysis, 3D-QSAR
approaches like COMFA and COMSIA.
THE DRUG DESIGN AND DEVELOPMENT BASED ON DRUG DISCOVERY ,HERE ITS NEED RATIONALE ARE EXPLAINED ALSO QSAR, MOLECULAR DOCKING ITS HISTORY NEED, STRUCTURE BASED DRUG DESIGN IN EASY WAY WE HAVE MENTIONED. THIS WILL MAKE READERS EASY TO COLLECT DATA AT A PLACE ALL OVER THIS IS FOR PHARMA STUDENTS, ACADEMICS, PROFESSIONL AND OST USEFUL FOR RESEARCHERS.
THANK YOU
HOPE YOU WILL LIKE AND SHARE
This powerpoint presentation will help to know about introduction of bioisosterism by Biotechnology point of view. Hope this powerpoint presentation will your reference.
An inductive effect occurs when the electrons shared between two atoms or groups of different electronegativities are withdrawn to the more electronegative atom or group through the σ bond resulting in a separation of charge, or dipole.
Contributed by: Colin Swenson and Tewoderos Ayele (Undergraduates)
University of Utah, 2015
A substituent effect is the change in a molecule’s reactivity when a substituent on the molecule is changed. In 1935, Louis Hammett designed a scale to measure influence of various substituents (X) at the meta- or para- positions on the acidity of benzoic acid.
Contributed by: Erika Aoyama and Megan Browning, University of Utah, 2016
This unit provides an overview of the different strategies that have been develop to selectively functionalize the 2,3 and 4 positions of pyridine units.
Contributed by the Sarpong Group, UC-Berkeley, 2013
Some reactions seem to obvious to fail, so what happens when they do? Quantum calculations yield invaluable insight to the nature of a reaction mechanism.
Presented at the Virtual Conference on Computational Chemistry VCCC 2014
Credit due to Guillermo Caballero on whose BSc thesis this presentation is based.
• Background and motivation – the success of pheophytin (pheo, 脫鎂葉綠素) catalyst
• Porphyrin-ring family and roles of their derivative morphologies
• Similar derivatives within DNA base pairs
• 1st-principle simulation of simplified H2 decomposition steps involving derivative DNA base pairs à energetically favorable?
• Wet DNA-catalyzed chemical battery experiment and result
• Dry DNA-catalyzed hydrogen fuel cell under room temperature
• Summary and conclusions
The Brønsted catalysis relationship is a Linear Free Energy Relationship (LFER) that relates ionization of an acid or base which catalyzes a reaction and the rate of the reaction.
Contributed by: Quincy Davis, Jonathan Greenhalgh, Joshua Visser (Undergraduates), University of Utah, 2016
Electrochemical Behaviour of 3-Arylazo-1,2,4-triazole Compounds in Aqueous Bu...Al Baha University
A variety of electroanalytical methods, e.g. DC polarography, cyclic voltammetry and controlled potential coulometry have been employed upon 3-arylazo-1,2,4-triazole derivatives, AAT; substituents affect the reduction potentials but do not alter the reduction pattern.
Hyperconjugation is the donation of a sigma bond into an adjacent empty or partially filled p orbital, which results in an increased stability of the molecule.
Contributed by: Samuel Redstone (Undergraduate), University of Utah, 2016
41 Limits on Light-Speed Anisotropies from Compton Scattering of High-Energy ...Cristian Randieri PhD
Limits on Light-Speed Anisotropies from Compton Scattering of High-Energy Electrons -The American Physical Society, Physical Review Letters, June 2010, Vol. 104, N. 24, pp. 241601-1-241601-5, ISSN: 0031-9007, doi: 10.1103/PhysRevLett.104.241601
di J. P. Bocquet, D. Moricciani, V. Bellini, M. Beretta, L. Casano, A. D'Angelo, R. Di Salvo, A. Fantini, D. Franco, G. Gervino, F. Ghio, G. Giardina, B. Girolami, A. Giusa, V. G. Gurzadyan, A. Kashin, S. Knyazyan, A. Lapik, R. Lehnert, P. Levi Sandri, A. Lleres, F. Mammoliti, G. Mandaglio, M. Manganaro, A. Margarian, S. Mehrabyan, R. Messi, V. Nedorezov, C. Perrin, C. Randieri, D. Rebreyend, N. Rudnev, G. Russo, C. Schaerf, M. L. Sperduto, M. C. Sutera, A. Turinge, V. Vegna (2010)
Abstract
The possibility of anisotropies in the speed of light relative to the limiting speed of electrons is considered. The absence of sidereal variations in the energy of Compton-edge photons at the ESRF's GRAAL facility constrains such anisotropies representing the first non-threshold collision-kinematics study of Lorentz violation. When interpreted within the minimal Standard-Model Extension, this result yields the two-sided limit of 1.6 x 10^{-14} at 95% confidence level on a combination of the parity-violating photon and electron coefficients kappa_{o+} and c. This new constraint provides an improvement over previous bounds by one order of magnitude.
The Propagation and Power Deposition of Electron Cyclotron Waves in Non-Circu...IJERA Editor
By solving the plasma equilibrium equation, ray equations, and quasi-linear Fokker-Planck equation, the ray
trajectories and power deposition of EC wave has been numerically simulated in non-circular HL-2A tokamak
plasma. The results show that shaping effect and temperature profile has little influence on ECRH, while plasma
density affect propagation and power deposition obviously. when the ordinary mode of EC waves are launched
from the mid-plane and low-field-side, ray trajectories are bended as the parallel refractive index increases and
even recurve to the low-field side when the parallel refractive index reaches to a certain value. Single absorption
decreases with increasing both poloidal and toroidal injection angle, and can be 100% when poloidal injection
angle is 180o and toroidal injection angle is less than 10o.
CH Functionalizations on Electron-Deficient Aromatics in the synthesis of Pi-...Daniel Morton
This module provides an overview of the techniques being developed to functionalize CH bonds on electron deficient aromatics for the preparation of Pi-conjugated materials.
Contributed by the Marder Group, 2014
C–H bond hydroxylation at non heme carboxylate-bridged diiron centersDaniel Morton
This unit provides an overview of how Nature has inspired the development of novel diiron bridged complexes for use in C–H Hydroxylation.
Contributed by Omar Villanueva and Cora MacBeth, Emory University, 2014
Collagen is made up of the repeating pattern Glycine-X-Y, where X and Y are commonly L-proline (Pro) and 4(R)-hydroxy-l-proline (Hyp), respectively. By substituting X and Y with a fluorine probe, stereoelectronic effects can be observed and compared to the effects of hydrogen bonding which has been predicted to be the main contributor to the collagen triple helix strength.
Contributed by: Alexandra Zudova, Samuel Broadbent (Undergraduates), University of Utah, 2013
Bio inspired metal-oxo catalysts for c–h bond functionalizationDaniel Morton
Metal-oxo complexes are important species in the activation of strong C–H bonds in biological systems. The high reactivity of metal-oxo complexes results from the way their valence electrons are arranged, and this arrangement depends strongly on the geometry around the metal center.
Contributed by: A.S. Borovik and Sarah Cook, University of California-Irvine, 2014
A carbene is any neutral carbon species which contains a non-bonding valance pair of electrons.
Contributed by Alison Brown & Nathan Buehler, Undergraduates, University of Utah
Aryl fluorines are present in two of the top 10 grossing drugs (Lipitor and Reserdal). The C-F bond is uniquely strong and prevents facile metabolism, giving these compounds longer T1/2 in vivo. The generalized mechanism for electrophilic aryl fluorination proceeds through a high valent metal species.
Contributed by: Zach Niemeyer, Justin Salvant (Undergraduates), University of Utah, 2013
The allylic position is the atom bound to a double bonded atom. The substituents on the allylic carbon and the doubly bonded atoms can result in allylic strain.
Contributed by: Sophia Robinson, (Undergraduate), Physical Organic Chemistry I, CHEM 7240 (Sigman), University of Utah, 2015
A 1,3-dipolar cycloaddition is a fascinating and diverse reaction that can be used in stepwise syntheses of large molecules, such as masked aldol reactions, and has potential biological applications. While it is an incredibly useful reactions, is also has a simple mechanism.
Contributed by: Created by Alexandra Kent and Judy Zhu (Undergraduates)Edited by Margaret Hilton
Honors Organic Chemistry
University of Utah
Since Heck’s seminal publication in 1968, the Heck reaction has been a powerful synthetic tool for the functionalization of olefins with aryl groups.
Contributed by Margaret Hilton, Sigman Lab, University of Utah, 2014
Stability and reactions of n heterocyclic carbenesDaniel Morton
Carbenes are two-coordinate carbon compounds with a sextet of electrons on the carbon. Most of them the indicate instability and high reactivity. Stable carbenes lead to new possibilities and fields. This overview introduces N-heterocyclic carbenes, a stable class of these unusual compounds.
Contributed by:
Özlem Urcan, F. Richard Kurth, Jonas Renner (Undergraduates), University of Utah, 2016
Tunneling is a phenomenon of Quantum Mechanics in which particles, with a small amount of probability, are able to “tunnel” or travel through a large, finite potential energy (PE) barrier instead of traveling over the barrier as Classic Mechanics dictates should occur.
Contributed by: Mark O’Dair, Undergraduate, University of Utah, 2014
The Prins-Pinacol reaction is a two step process. It begins with the Prins reaction, which is the attack by a nucleophilic alkene on a Lewis acid-activated aldehyde. This forms a cationic intermediate. The pinacol rearrangement is a methyl shift which pushes the cation on to an oxygen, which is then deprotonated.
Contributed by: Andy Clevenger (Undergraduate), University of Utah, 2016
When substrates are put in solution, the solvent molecules can organize themselves around a charged species to stabilize it. Solvents can stabilize a charge most effectively when the charge on the substrate is easy to get to.
Contributed by: Jamie Allen, Jacqueline Pasek-Allen, Sarah Lefave (Undergraduates), University of Utah, 2016
Solvation can be defined as any stabilizing interaction of a solute (or solute moiety) and the solvent. These interactions can be weak, purely electrostatic, as is the case with non-polar solutes and solvents, or more significant, involving the interactions between dipole moments or between dipoles and formal charges.
Contributed by: Anton S. Klimenko (Undergraduate), Department of Chemistry, The University of Utah, 2016
The anomeric effect was discovered in 1955 with the work of J.T. Edward, N.-J. Chu, and R.U. Lemieux.
Contributed by: Cody F. Bender, Charles E. Price (Undergraduates), University of Utah, 2016
An overview of the use of the Marcus Theory to calculate the energies of transition states.
Contributed by: Elizabeth Greenhalgh, Amanda Bischoff, and Matthew Sigman, University of Utah, 2015
Using molecular orbital theory to explain bonding in cyclopropaneDaniel Morton
Following its discovery in 1881 by August Freund cyclopropane fueled the debate of how atoms interact within a molecule. Any bonding model used needed to fit with the following physical properties of cyclopropane.
Contributed by: Travis Kienholz (Undergraduate), University of Utah, 2015
Cyclic conformation and nucleic acid sugar puckeringDaniel Morton
Cyclic systems are ubiquitous, in nature and synthetic chemistry. Establishing an understanding of the shape preferences (e.g., strain and energetics) regarding representative cyclic models is a powerful tool in conformational analysis. The expanded review of fundamental cycloalkanes can further assist in preferential conformational analysis of associated derivatives.
Contributed by: Roland Jones, Dane Brankle, and Peter Stevenson, University of Utah, 2015
The Zimmerman-Traxler model is invoked to rationalize the unexpected stereochemical outcomes of certain aldol reactions, such as the Reformatsky and Ivanov reactions. It models the stereochemistry of the products, based on the steric hindrance in the possible six-membered transition states in the aldol condensation reactions.
Created by Alexis Johnson (Undergraduate)
Edited by Margaret Hilton
Honors Organic Chemistry
CHEM 2321 (Sigman), 2013, University of Utah
Cytochrome P450 Oxidases (CYPs) are the principal enzymes implicated in drug metabolism, catalyzing approximately 75% of reactions.
Created by Joseph Aman (Undergraduate)
Edited by Margaret Hilton
Honors Organic Chemistry
Chem 2321 (Sigman), 2013, University of Utah
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
2. Derivation of σ values
Ionization reaction used to probe effects of substituent on acidity
Deriving σ
Theory and Development of Hammett Parameters
Overview: The Hammett Plot is a type of Linear Free-Energy Relationship (LFER)
analysis designed to model the electronic effect of substituents on aromatic systems
(in the para and meta positions only). Information gathered can be used to probe the
mechanism of the reaction and can be applied in the optimization of reaction
conditions.
Wiki Page: http://en.wikipedia.org/wiki/Hammett_equation
Other References: Hammett, L. P. Chem. Rev. 1935, 17, 125-136. Hammett, L. P. J. Am. Chem. Soc. 1937, 59, 96-103.
Acidity and σ values
X OMe H Cl NO2CH3
pKa
s 0-0.27 -0.17 0.23 0.71
3.443.994.24.47 4.36
electron-
donating
electron-
withdrawing
O
OH
X
O
O
X
H2O H3O
keq
3. Relationship of σ to new reactions
Consider similar reaction:
Using previously derived σ values write:
Theory and Development of Hammett Parameters
Overview: The Hammett Plot is a type of Linear Free-Energy Relationship (LFER)
analysis designed to model the electronic effect of substituents on aromatic systems
(in the para and meta positions only). Information gathered can be used to probe the
mechanism of the reaction and can be applied in the optimization of reaction
conditions.
Wiki Page: http://en.wikipedia.org/wiki/Hammett_equation
Other References: Hammett, L. P. Chem. Rev. 1935, 17, 125-136. Hammett, L. P. J. Am. Chem. Soc. 1937, 59, 96-103.
X X
H2O H3O
keq
O
OH
O
O
• ρ is a correction factor to
compare a new reaction
to the original
• Magnitude and slope of ρ
gives mechanistic insight
4. Applications of Hammett Parameters
References: Neu, H. M.; Yang, T.; Baglia, R. A.; Yosca, T. H.; Green, M. T.; Quesne, M. G.; de Visser, S. P.; Goldberg, D. P. J. Am.
Chem. Soc. 2014, 136, 13845-13852
Split Hammett plots reveal a changing mechanism due to the electron
donating/withdrawing nature of the substituent (X).
As seen in the differing pathways, there is a mechanistic change
occurring depending on whether X is a EDG (pathway A) or
EWG (pathway B). When the p-thioanisole has a EWG attached,
the electron density being pulled away from the S-O bonding
location, activating it for faster bonding which is seen by the
Hammett Plot.
5. Problems
References: Moerdyk, J. P.; Blake, G. A.; Chase, D. T.; Bielawski, C. W. J. Am. Chem. Soc. 2013, 135, 18798-18801.
1. Two proposed mechanistic pathways leading to N—H activation are shown below. Two Hammett Plots
were produced by reacting DAC or NHC with para-substituted aniline. Discuss ρ in the σpara and σ- plots.
Which mechanistic pathway is more likely for the DAC reaction shown?
N N
OO
Mes Mes
N N
OO
Mes Mes
H N
Ar
H
N
ArH H
N N
OO
Mes Mes
N N
OO
Mes Mes
H
N H
Ar
N
H
H
Ar
d+
d-
d-
d+
N N
OO
Mes Mes
H NHAr
Pathway B: Electrophilic Carbene
Pathway A: Nucleophilic Carbene
DAC
DAC
NN MesMes
NHC
6. Problems
2. The Hammett study performed below was fit to σ-
, σ+
, and σ; σ had the best
correlation. Provide insight as to what this means. The slope of the plot was
found to be 1.4, a positive correlation. Explain the ρ value. (Hint: Consider the
transition state).
References: Shukla, K.; DeShong, P. J. Org. Chem. 2008, 73, 6283-6291
OCO2Et
Pd
Ln
Pd
Ln
R
F Si(OEt)3
d+
d-
d-
Pd
Ln
R R
Pd(0)
fast
transmetallation
7. Solutions
1. In plot A, the slope of ρ indicates that electron donating substituents facilitate
the reaction. Electron donating substituents on p-aniline would make the
nitrogen more nucleophilic, indicating that DAC is acting as the electrophile and
the reaction is undergoing an electrophilic activation mechanism (Pathway B).
In plot B, the slope of ρ indicates that electron withdrawing groups facilitate the
reaction, making the nitrogen of aniline more electrophilic. Thus, NHC is likely
acting as a nucleophilic carbene in the reaction pathway (similar to Pathway A).
Note that for Plot B, σ- parameters are graphed, indicating that a partial
negative charge on the aniline nitrogen is stabilized by resonance during the
reaction.
2. In order for the Hammett plot to correlate well with σ+/- there must be some
charge resonance involved, because the σ plot correlated the best, there is
little/no charge resonance at the transition state. The trend seen with EDG
slowing the reaction and EWD accelerating the reaction would result in a
positive ρ value. This is confirmed by the electron density in the transition state
with a positive Pd attacking the slightly negative aromatic ring which would
mean that a EDG would make that negative point even more negative.
8. This work is licensed under a
Creative Commons Attribution-
ShareAlike 4.0 International
License.
Contributed by:
Eric Amerling & Christine Nervig (Undergraduates)
University of Utah, 2013