http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
This talk will cover various medical applications of deep learning including tumor segmentation in histology slides, MRI, CT, and X-Ray data. Also, more complicated tasks such as cell counting where the challenge is to count how many objects are in an image. It will also cover generative adversarial networks and how they can be used for medical applications. This presentation is accessible to non-doctors and non-computer scientists.
Talk @ ACM SF Bayarea Chapter on Deep Learning for medical imaging space.
The talk covers use cases, special challenges and solutions for Deep Learning for Medical Image Analysis using Tensorflow+Keras. You will learn about:
- Use cases for Deep Learning in Medical Image Analysis
- Different DNN architectures used for Medical Image Analysis
- Special purpose compute / accelerators for Deep Learning (in the Cloud / On-prem)
- How to parallelize your models for faster training of models and serving for inferenceing.
- Optimization techniques to get the best performance from your cluster (like Kubernetes/ Apache Mesos / Spark)
- How to build an efficient Data Pipeline for Medical Image Analysis using Deep Learning
- Resources to jump start your journey - like public data sets, common models used in Medical Image Analysis
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AISeth Grimes
Dan Lee from Dentuit AI presented an Intro to Deep Learning for Medical Image Analysis at the Maryland AI meetup (https://www.meetup.com/Maryland-AI), May 27, 2020. Visit https://www.youtube.com/watch?v=xl8i7CGDQi0 for video.
https://telecombcn-dl.github.io/2017-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or image captioning.
deep learning applications in medical image analysis brain tumorVenkat Projects
The tremendous success of machine learning algorithms at image recognition tasks in recent years intersects with a time of dramatically increased use of electronic medical records and diagnostic imaging. This review introduces the machine learning algorithms as applied to medical image analysis, focusing on convolutional neural networks, and emphasizing clinical aspects of the _eld. The advantage of machine learning in an era of medical big data is that signi_cant hierarchal relationships within the data can be discovered algorithmically without laborious hand-crafting of features. We cover key research areas and applications of medical image classi_cation, localization, detection, segmentation, and registration. We conclude by discussing research obstacles, emerging trends, and possible future directions.
Prospects of Deep Learning in Medical ImagingGodswll Egegwu
A SEMINAR Presentation on the Prospects of Deep Learning in Medical Imaging Presented to the Department of Computer Science, Nasarawa State Polytechnic, Lafia.
BY:
EGEGWU, GODSWILL
08166643792
http://facebook.com/godswill.egegwu
http://egegwugodswill.name.ng
This talk will cover various medical applications of deep learning including tumor segmentation in histology slides, MRI, CT, and X-Ray data. Also, more complicated tasks such as cell counting where the challenge is to count how many objects are in an image. It will also cover generative adversarial networks and how they can be used for medical applications. This presentation is accessible to non-doctors and non-computer scientists.
Talk @ ACM SF Bayarea Chapter on Deep Learning for medical imaging space.
The talk covers use cases, special challenges and solutions for Deep Learning for Medical Image Analysis using Tensorflow+Keras. You will learn about:
- Use cases for Deep Learning in Medical Image Analysis
- Different DNN architectures used for Medical Image Analysis
- Special purpose compute / accelerators for Deep Learning (in the Cloud / On-prem)
- How to parallelize your models for faster training of models and serving for inferenceing.
- Optimization techniques to get the best performance from your cluster (like Kubernetes/ Apache Mesos / Spark)
- How to build an efficient Data Pipeline for Medical Image Analysis using Deep Learning
- Resources to jump start your journey - like public data sets, common models used in Medical Image Analysis
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AISeth Grimes
Dan Lee from Dentuit AI presented an Intro to Deep Learning for Medical Image Analysis at the Maryland AI meetup (https://www.meetup.com/Maryland-AI), May 27, 2020. Visit https://www.youtube.com/watch?v=xl8i7CGDQi0 for video.
https://telecombcn-dl.github.io/2017-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or image captioning.
deep learning applications in medical image analysis brain tumorVenkat Projects
The tremendous success of machine learning algorithms at image recognition tasks in recent years intersects with a time of dramatically increased use of electronic medical records and diagnostic imaging. This review introduces the machine learning algorithms as applied to medical image analysis, focusing on convolutional neural networks, and emphasizing clinical aspects of the _eld. The advantage of machine learning in an era of medical big data is that signi_cant hierarchal relationships within the data can be discovered algorithmically without laborious hand-crafting of features. We cover key research areas and applications of medical image classi_cation, localization, detection, segmentation, and registration. We conclude by discussing research obstacles, emerging trends, and possible future directions.
Prospects of Deep Learning in Medical ImagingGodswll Egegwu
A SEMINAR Presentation on the Prospects of Deep Learning in Medical Imaging Presented to the Department of Computer Science, Nasarawa State Polytechnic, Lafia.
BY:
EGEGWU, GODSWILL
08166643792
http://facebook.com/godswill.egegwu
http://egegwugodswill.name.ng
Adaptive K-Means Clustering Algorithm for MR Breast Image Segmentation
3D Brain Tumor Segmentation Scheme using K-mean Clustering and Connected Component Labeling Algorithms
Volume Identification and Estimation of MRI Brain Tumor
MRI Breast cancer diagnosis hybrid approach using adaptive Ant-based segmentation and Multilayer Perceptron NN classifier
Brain tumor classification using artificial neural network on mri imageseSAT Journals
Abstract
In this paper, an attempt has been made to summarize the multi-resolution transformation and the different classifiers useful to
analyze the brain tumor using MRI. X-ray, MRI, Ultrasound etc. are different techniques used to scan brain tumor images.
Radiologist prefers MRI to get detail information about tumor to help him diagnoses. In this paper we have used MRI of brain
tumor for analysis. We have used Digital image processing tool for detection of the tumor. The identification, detection and
classification of brain tumor have been done by extracting features from MRI with the help of wavelet transformation. The MRI of
brain tumor is classified into two categories normal and abnormal brain. In this work Digital image processing has been used as
a tool for getting clear and exact details about tumor in earlier stages. This helps the physicians and practitioners for diagnoses.
Key word – Brain tumor, Wavelet transform, segmentation.
Performance analysis of automated brain tumor detection from MR imaging and CT scan using basic image processing techniques based on various hard and soft computing has been performed in our work. Moreover, we applied six traditional classifiers to detect brain tumor in the images. Then we applied CNN for brain tumor detection to include deep learning method in our work. We compared the result of the traditional one having the best accuracy (SVM) with the result of CNN. Furthermore, our work presents a generic method of tumor detection and extraction of its various features.
details about brain tumor
literature survey on many reference papers related to brain tumor detection using various techniques
our proposed novel methodology for brain tumor detection
Brain tumor detection with the mri image and 54900 image Performance analysis of automated brain tumor detection from MR imaging and CT scan using basic image processing techniques based on various hard and soft .This repo is of segmentation and morphological operations which are the basic concepts of image processing. Detection and extraction of tumor from MRI scan images of the brain is done using python.
Since its launch in mid-January, the Data Science Bowl Lung Cancer Detection Competition has attracted more than 1,000 submissions. To be successful in this competition, data scientists need to be able to get started quickly and make rapid iterative changes. In this talk, we show how to compute features of the scanned images in the competition with a pre-trained Convolutional Neural Network (CNN) with Cognitive Toolkit (previously named CNTK), and use these features to classify the scans into cancerous or not cancerous, using a boosted tree with Light-GBM library, all in one hour.
Blog post: https://blogs.technet.microsoft.com/machinelearning/2017/02/17/quick-start-guide-to-the-data-science-bowl-lung-cancer-detection-challenge-using-deep-learning-microsoft-cognitive-toolkit-and-azure-gpu-vms/
BRAIN TUMOR MRI IMAGE SEGMENTATION AND DETECTION IN IMAGE PROCESSINGDharshika Shreeganesh
Image processing is an active research area in which medical image processing is a highly challenging field. Medical imaging
techniques are used to image the inner portions of the human body for medical diagnosis. Brain tumor is a serious life altering
disease condition. Image segmentation plays a significant role in image processing as it helps in the extraction of suspicious regions
from the medical images. In this paper we have proposed segmentation of brain MRI image using K-means clustering algorithm
followed by morphological filtering which avoids the misclustered regions that can inevitably be formed after segmentation of the brain MRI image for detection of tumor location.
Short presentation for a special lecture on Medicine Graduation Course in Hospital de Clínicas (https://www.hcpa.edu.br/), as part of a one-day special discipline on Machine Learning and Healthcare. The goal was introducing the importance of Deep Learning for Healthcare as well as showing some of the recent impact.
Applying Deep Learning to Transform Breast Cancer DiagnosisCognizant
Deep convolutional neural networks can assist pathologists in breast cancer diagnosis by automatically filtering benign tissue biopsies, identifying malignant regions and labeling important cellular features like nuclei for further analysis. Automatic detection of diagnostically relevant regions-of-interest and nuclei segmentation reduces the pathologist’s workload, while ensuring that no critical region is overlooked, rendering breast cancer diagnosis more reliable, efficient and cost-effective.
Brain Tumor Segmentation using Enhanced U-Net Model with Empirical AnalysisMD Abdullah Al Nasim
Cancer of the brain is deadly and requires careful surgical segmentation. The brain tumors were segmented using U-Net using a Convolutional Neural Network (CNN). When looking for overlaps of necrotic, edematous, growing, and healthy tissue, it might be hard to get relevant information from the images. The 2D U-Net network was improved and trained with the BraTS datasets to find these four areas. U-Net can set up many encoder and decoder routes that can be used to get information from images that can be used in different ways. To reduce computational time, we use image segmentation to exclude insignificant background details. Experiments on the BraTS datasets show that our proposed model for segmenting brain tumors from MRI (MRI) works well. In this study, we demonstrate that the BraTS datasets for 2017, 2018, 2019, and 2020 do not significantly differ from the BraTS 2019 dataset's attained dice scores of 0.8717 (necrotic), 0.9506 (edema), and 0.9427 (enhancing).
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
Adaptive K-Means Clustering Algorithm for MR Breast Image Segmentation
3D Brain Tumor Segmentation Scheme using K-mean Clustering and Connected Component Labeling Algorithms
Volume Identification and Estimation of MRI Brain Tumor
MRI Breast cancer diagnosis hybrid approach using adaptive Ant-based segmentation and Multilayer Perceptron NN classifier
Brain tumor classification using artificial neural network on mri imageseSAT Journals
Abstract
In this paper, an attempt has been made to summarize the multi-resolution transformation and the different classifiers useful to
analyze the brain tumor using MRI. X-ray, MRI, Ultrasound etc. are different techniques used to scan brain tumor images.
Radiologist prefers MRI to get detail information about tumor to help him diagnoses. In this paper we have used MRI of brain
tumor for analysis. We have used Digital image processing tool for detection of the tumor. The identification, detection and
classification of brain tumor have been done by extracting features from MRI with the help of wavelet transformation. The MRI of
brain tumor is classified into two categories normal and abnormal brain. In this work Digital image processing has been used as
a tool for getting clear and exact details about tumor in earlier stages. This helps the physicians and practitioners for diagnoses.
Key word – Brain tumor, Wavelet transform, segmentation.
Performance analysis of automated brain tumor detection from MR imaging and CT scan using basic image processing techniques based on various hard and soft computing has been performed in our work. Moreover, we applied six traditional classifiers to detect brain tumor in the images. Then we applied CNN for brain tumor detection to include deep learning method in our work. We compared the result of the traditional one having the best accuracy (SVM) with the result of CNN. Furthermore, our work presents a generic method of tumor detection and extraction of its various features.
details about brain tumor
literature survey on many reference papers related to brain tumor detection using various techniques
our proposed novel methodology for brain tumor detection
Brain tumor detection with the mri image and 54900 image Performance analysis of automated brain tumor detection from MR imaging and CT scan using basic image processing techniques based on various hard and soft .This repo is of segmentation and morphological operations which are the basic concepts of image processing. Detection and extraction of tumor from MRI scan images of the brain is done using python.
Since its launch in mid-January, the Data Science Bowl Lung Cancer Detection Competition has attracted more than 1,000 submissions. To be successful in this competition, data scientists need to be able to get started quickly and make rapid iterative changes. In this talk, we show how to compute features of the scanned images in the competition with a pre-trained Convolutional Neural Network (CNN) with Cognitive Toolkit (previously named CNTK), and use these features to classify the scans into cancerous or not cancerous, using a boosted tree with Light-GBM library, all in one hour.
Blog post: https://blogs.technet.microsoft.com/machinelearning/2017/02/17/quick-start-guide-to-the-data-science-bowl-lung-cancer-detection-challenge-using-deep-learning-microsoft-cognitive-toolkit-and-azure-gpu-vms/
BRAIN TUMOR MRI IMAGE SEGMENTATION AND DETECTION IN IMAGE PROCESSINGDharshika Shreeganesh
Image processing is an active research area in which medical image processing is a highly challenging field. Medical imaging
techniques are used to image the inner portions of the human body for medical diagnosis. Brain tumor is a serious life altering
disease condition. Image segmentation plays a significant role in image processing as it helps in the extraction of suspicious regions
from the medical images. In this paper we have proposed segmentation of brain MRI image using K-means clustering algorithm
followed by morphological filtering which avoids the misclustered regions that can inevitably be formed after segmentation of the brain MRI image for detection of tumor location.
Short presentation for a special lecture on Medicine Graduation Course in Hospital de Clínicas (https://www.hcpa.edu.br/), as part of a one-day special discipline on Machine Learning and Healthcare. The goal was introducing the importance of Deep Learning for Healthcare as well as showing some of the recent impact.
Applying Deep Learning to Transform Breast Cancer DiagnosisCognizant
Deep convolutional neural networks can assist pathologists in breast cancer diagnosis by automatically filtering benign tissue biopsies, identifying malignant regions and labeling important cellular features like nuclei for further analysis. Automatic detection of diagnostically relevant regions-of-interest and nuclei segmentation reduces the pathologist’s workload, while ensuring that no critical region is overlooked, rendering breast cancer diagnosis more reliable, efficient and cost-effective.
Brain Tumor Segmentation using Enhanced U-Net Model with Empirical AnalysisMD Abdullah Al Nasim
Cancer of the brain is deadly and requires careful surgical segmentation. The brain tumors were segmented using U-Net using a Convolutional Neural Network (CNN). When looking for overlaps of necrotic, edematous, growing, and healthy tissue, it might be hard to get relevant information from the images. The 2D U-Net network was improved and trained with the BraTS datasets to find these four areas. U-Net can set up many encoder and decoder routes that can be used to get information from images that can be used in different ways. To reduce computational time, we use image segmentation to exclude insignificant background details. Experiments on the BraTS datasets show that our proposed model for segmenting brain tumors from MRI (MRI) works well. In this study, we demonstrate that the BraTS datasets for 2017, 2018, 2019, and 2020 do not significantly differ from the BraTS 2019 dataset's attained dice scores of 0.8717 (necrotic), 0.9506 (edema), and 0.9427 (enhancing).
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep Learning for Computer Vision Barcelona
Summer seminar UPC TelecomBCN (July 4-8, 2016)
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
http://imatge-upc.github.io/telecombcn-2016-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
https://telecombcn-dl.github.io/2018-dlcv/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or image captioning.
Glioblastomas brain tumour segmentation based on convolutional neural network...IJECEIAES
Brain tumour segmentation can improve diagnostics efficiency, rise the prediction rate and treatment planning. This will help the doctors and experts in their work. Where many types of brain tumour may be classified easily, the gliomas tumour is challenging to be segmented because of the diffusion between the tumour and the surrounding edema. Another important challenge with this type of brain tumour is that the tumour may grow anywhere in the brain with different shape and size. Brain cancer presents one of the most famous diseases over the world, which encourage the researchers to find a high-throughput system for tumour detection and classification. Several approaches have been proposed to design automatic detection and classification systems. This paper presents an integrated framework to segment the gliomas brain tumour automatically using pixel clustering for the MRI images foreground and background and classify its type based on deep learning mechanism, which is the convolutional neural network. In this work, a novel segmentation and classification system is proposed to detect the tumour cells and classify the brain image if it is healthy or not. After collecting data for healthy and non-healthy brain images, satisfactory results are found and registered using computer vision approaches. This approach can be used as a part of a bigger diagnosis system for breast tumour detection and manipulation.
3D Segmentation of Brain Tumor ImagingIJAEMSJORNAL
A brain tumor is a collection of anomalous cells that grow in or around the brain. Brain tumors affect the humans badly, it can disrupt proper brain function and be life-threatening. In this project, we have proposed a system to detect, segment, and classify the tumors present in the brain. Once the brain tumor is identified at the very beginning, proper treatments can be done and it may be cured.
Breast cancer detection using ensemble of convolutional neural networksIJECEIAES
Early detection leading to timely treatment in the initial stages of cancer may decrease the breast cancer death rate. We propose deep learning techniques along with image processing for the detection of tumors. The availability of online datasets and advances in graphical processing units (GPU) have promoted the application of deep learning models for the detection of breast cancer. In this paper, deep learning models using convolutional neural network (CNN) have been built to automatically classify mammograms into benign and malignant. Issues like overfitting and dataset imbalance are overcome. Experimentation has been done on two publicly available datasets, namely mammographic image analysis society (MIAS) database and digital database for screening mammography (DDSM). Robustness of the models is accomplished by merging the datasets. In our experimentation, MatConvNet has achieved an accuracy of 94.2% on the merged dataset, performing the best amongst all the CNN models used individually. Hungarian optimization algorithm is employed for selection of individual CNN models to form an ensemble. Ensemble of CNN models led to an improved performance, resulting in an accuracy of 95.7%.
Breast cancer histological images nuclei segmentation and optimized classifi...IJECEIAES
Breast cancer incidences have grown worldwide during the previous few years. The histological images obtained from a biopsy of breast tissues are regarded as being the highest accurate approach to determine whether any cells exhibit symptoms of cancer. The visible position of nuclei inside the image is achieved through the use of instance segmentation, nevertheless, this work involves nucleus segmentation and features classification of the predicted nucleus for the achievement of best accuracy. The extracted features map using the feature pyramid network has been modified using segmenting objects by locations (SOLO) convolution with grasshopper optimization for multiclass classification. A breast cancer multiclassification technique based on a suggested deep learning algorithm was examined to achieve the accuracy of 99.2% using a huge database of ICIAR 2018, demonstrating the method’s efficacy in offering an important weapon for breast cancer multi-classification in a medical setting. The segmentation accuracy achieved is 88.46%.
Lung Cancer Detection using transfer learning.pptx.pdfjagan477830
Lung cancer is one of the deadliest cancers worldwide. However, the early detection of lung cancer significantly improves survival rate. Cancerous (malignant) and noncancerous (benign) pulmonary nodules are the small growths of cells inside the lung. Detection of malignant lung nodules at an early stage is necessary for the crucial prognosis.
Medical Image segmentation from dl .pptxSACHINS902817
Medical image segmentation is a critical task in the field of medical imaging analysis, with far-reaching implications for diagnosis, treatment planning, and disease monitoring. In this comprehensive discussion, we will explore the principles, techniques, challenges, applications, and future directions of medical image segmentation.
Introduction to Medical Image Segmentation
Medical image segmentation refers to the process of partitioning images acquired from various medical imaging modalities into meaningful regions or segments. These segments correspond to specific anatomical structures, pathological lesions, or other regions of interest within the human body. The primary goal of segmentation is to accurately delineate and extract relevant information from medical images, enabling clinicians to interpret and analyze the data effectively.
Importance of Medical Image Segmentation
The significance of medical image segmentation cannot be overstated, as it plays a crucial role in numerous clinical applications:
Diagnosis: Segmentation aids in the identification and characterization of abnormalities, such as tumors, lesions, and other pathological structures.
Treatment Planning: Precise segmentation facilitates treatment planning by providing clinicians with detailed information about the spatial extent and location of anatomical structures and pathological regions.
Image-Guided Interventions: Segmentation enables image-guided interventions, including surgical navigation, radiation therapy, and minimally invasive procedures.
Disease Monitoring: Changes in segmented regions over time can be used to monitor disease progression, treatment response, and patient outcomes.
Techniques for Medical Image Segmentation
A variety of techniques have been developed for medical image segmentation, ranging from traditional methods to advanced machine learning and deep learning approaches:
Thresholding: Simple thresholding techniques segment images based on intensity values, dividing them into foreground and background regions.
Region-Based Methods: Region growing, region merging, and watershed algorithms identify regions of uniform intensity or texture.
Edge-Based Methods: Edge detection algorithms identify boundaries between different regions based on intensity gradients.
Clustering Algorithms: K-means clustering and fuzzy c-means clustering group pixels with similar characteristics into clusters.
Machine Learning Approaches: Supervised and unsupervised machine learning algorithms, such as support vector machines (SVMs) and k-nearest neighbors (KNN), learn segmentation patterns from labeled training data.
Deep Learning Models: Convolutional neural networks (CNNs), particularly architectures like U-Net, FCN (Fully Convolutional Network), and SegNet, have revolutionized medical image segmentation by automatically learning hierarchical features from raw image data.
Challenges in Medical Image Segmentation
Despite significant advancements, medical image segmentatio
Brain Tumor is basically the unusual growth of some new cells found in the brain. This can happen in any area of the brain. Tumor are categorized by finding the origin of the cell which has tumor and if the cells are cancerous or not. Segmentation process is carried out to find if brain tumor exists or not, then the response of the patient to the tests performed is collected, different therapy sessions and also by creating models which has tumor growth in it. This one is different from the other types of tumor. Anyone can suffer from this disease. Primary tumors are basically Benign or Malignant. Here, we propose CNN Convolutional Neural Network based approach for improving accuracy. It also have capacity to detect certain features without any interaction from human beings. With the help of this model it classifies whether the MRI brain scan has tumor or not. There are other different algorithms, but this paper shows that CNN gives more accuracy than the rest. This model gives validation accuracy between 77 85 . gives more precise and accurate results. CNN also let us to train large data sets and cross validate results, hence the most easy and reliable model to use. Anagha Jayakumar | Mehtab Mehdi "Brain Tumor Detection using Neural Network" Published in International Journal of Trend in Scientific Research and Development (ijtsrd), ISSN: 2456-6470, Volume-5 | Issue-1 , December 2020, URL: https://www.ijtsrd.com/papers/ijtsrd38105.pdf Paper URL : https://www.ijtsrd.com/computer-science/other/38105/brain-tumor-detection-using-neural-network/anagha-jayakumar
The biomedical profession has gained importance due to the rapid and accurate diagnosis of clinical patients using computer-aided diagnosis (CAD) tools.
The diagnosis and treatment of Alzheimer’s disease (AD) using complementary multimodalities can improve the quality of life and mental state of patients.
In this study, we integrated a lightweight custom convolutional neural network
(CNN) model and nature-inspired optimization techniques to enhance the performance, robustness, and stability of progress detection in AD. A multi-modal
fusion database approach was implemented, including positron emission tomography (PET) and magnetic resonance imaging (MRI) datasets, to create a fused
database. We compared the performance of custom and pre-trained deep learning models with and without optimization and found that employing natureinspired algorithms like the particle swarm optimization algorithm (PSO) algorithm significantly improved system performance. The proposed methodology,
which includes a fused multimodality database and optimization strategy, improved performance metrics such as training, validation, test accuracy, precision, and recall. Furthermore, PSO was found to improve the performance of
pre-trained models by 3-5% and custom models by up to 22%. Combining different medical imaging modalities improved the overall model performance by
2-5%. In conclusion, a customized lightweight CNN model and nature-inspired
optimization techniques can significantly enhance progress detection, leading to
better biomedical research and patient care.
Adversarial attack driven data augmentation for medical imagesIJECEIAES
An important stage in medical image analysis is segmentation, which aids in focusing on the required area of an image and speeds up findings. Fortunately, deep learning models have taken over with their high-performing capabilities, making this process simpler. The deep learning model’s reliance on vast data, however, makes it difficult to utilize for medical image analysis due to the scarcity of data samples. Too far, a number of data augmentations techniques have been employed to address the issue of data unavailability. Here, we present a novel method of augmentation that enabled the UNet model to segment the input dataset with about 90% accuracy in just 30 epochs. We describe the us- age of fast gradient sign method (FGSM) as an augmentation tool for adversarial machine learning attack methods. Besides, we have developed the method of Inverse FGSM, which im- proves performance by operating in the opposite way from FGSM adversarial attacks. In comparison to the conventional FGSM methodology, our strategy boosted performance up to 6% to 7% on average. The model became more resilient to hostile attacks because to these two strategies. An innovative implementation of adversarial machine learning and resilience augmentation is revealed by the overall analysis of this study.
Similar to Deep Learning for Computer Vision: Medical Imaging (UPC 2016) (20)
This document provides an overview of deep generative learning and summarizes several key generative models including GANs, VAEs, diffusion models, and autoregressive models. It discusses the motivation for generative models and their applications such as image generation, text-to-image synthesis, and enhancing other media like video and speech. Example state-of-the-art models are provided for each application. The document also covers important concepts like the difference between discriminative and generative modeling, sampling techniques, and the training procedures for GANs and VAEs.
Machine translation and computer vision have greatly benefited from the advances in deep learning. A large and diverse amount of textual and visual data have been used to train neural networks whether in a supervised or self-supervised manner. Nevertheless, the convergence of the two fields in sign language translation and production still poses multiple open challenges, like the low video resources, limitations in hand pose estimation, or 3D spatial grounding from poses.
The transformer is the neural architecture that has received most attention in the early 2020's. It removed the recurrency in RNNs, replacing it with and attention mechanism across the input and output tokens of a sequence (cross-attenntion) and between the tokens composing the input (and output) sequences, named self-attention.
These slides review the research of our lab since 2016 on applied deep learning, starting from our participation in the TRECVID Instance Search 2014, moving into video analysis with CNN+RNN architectures, and our current efforts in sign language translation and production.
Machine translation and computer vision have greatly benefited of the advances in deep learning. The large and diverse amount of textual and visual data have been used to train neural networks whether in a supervised or self-supervised manner. Nevertheless, the convergence of the two field in sign language translation and production is still poses multiple open challenges, like the low video resources, limitations in hand pose estimation, or 3D spatial grounding from poses. This talk will present these challenges and the How2✌️Sign dataset (https://how2sign.github.io) recorded at CMU in collaboration with UPC, BSC, Gallaudet University and Facebook.
https://imatge.upc.edu/web/publications/sign-language-translation-and-production-multimedia-and-multimodal-challenges-all
https://imatge-upc.github.io/synthref/
Integrating computer vision with natural language processing has achieved significant progress
over the last years owing to the continuous evolution of deep learning. A novel vision and language
task, which is tackled in the present Master thesis is referring video object segmentation, in which a
language query defines which instance to segment from a video sequence. One of the biggest chal-
lenges for this task is the lack of relatively large annotated datasets since a tremendous amount of
time and human effort is required for annotation. Moreover, existing datasets suffer from poor qual-
ity annotations in the sense that approximately one out of ten language expressions fails to uniquely
describe the target object.
The purpose of the present Master thesis is to address these challenges by proposing a novel
method for generating synthetic referring expressions for an image (video frame). This method pro-
duces synthetic referring expressions by using only the ground-truth annotations of the objects as well
as their attributes, which are detected by a state-of-the-art object detection deep neural network. One
of the advantages of the proposed method is that its formulation allows its application to any object
detection or segmentation dataset.
By using the proposed method, the first large-scale dataset with synthetic referring expressions for
video object segmentation is created, based on an existing large benchmark dataset for video instance
segmentation. A statistical analysis and comparison of the created synthetic dataset with existing ones
is also provided in the present Master thesis.
The conducted experiments on three different datasets used for referring video object segmen-
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demonstrate that by pre-training a deep neural network with the proposed synthetic dataset one can
improve the ability of the network to generalize across different datasets, without any additional annotation cost. This outcome is even more important taking into account that no additional annotation cost is involved.
Master MATT thesis defense by Juan José Nieto
Advised by Víctor Campos and Xavier Giro-i-Nieto.
27th May 2021.
Pre-training Reinforcement Learning (RL) agents in a task-agnostic manner has shown promising results. However, previous works still struggle to learn and discover meaningful skills in high-dimensional state-spaces. We approach the problem by leveraging unsupervised skill discovery and self-supervised learning of state representations. In our work, we learn a compact latent representation by making use of variational or contrastive techniques. We demonstrate that both allow learning a set of basic navigation skills by maximizing an information theoretic objective. We assess our method in Minecraft 3D maps with different complexities. Our results show that representations and conditioned policies learned from pixels are enough for toy examples, but do not scale to realistic and complex maps. We also explore alternative rewards and input observations to overcome these limitations.
https://imatge.upc.edu/web/publications/discovery-and-learning-navigation-goals-pixels-minecraft
Peter Muschick MSc thesis
Universitat Pollitecnica de Catalunya, 2020
Sign language recognition and translation has been an active research field in the recent years with most approaches using deep neural networks to extract information from sign language data. This work investigates the mostly disregarded approach of using human keypoint estimation from image and video data with OpenPose in combination with transformer network architecture. Firstly, it was shown that it is possible to recognize individual signs (4.5% word error rate (WER)). Continuous sign language recognition though was more error prone (77.3% WER) and sign language translation was not possible using the proposed methods, which might be due to low accuracy scores of human keypoint estimation by OpenPose and accompanying loss of information or insufficient capacities of the used transformer model. Results may improve with the use of datasets containing higher repetition rates of individual signs or focusing more precisely on keypoint extraction of hands.
https://github.com/telecombcn-dl/lectures-all/
These slides review techniques for interpreting the behavior of deep neural networks. The talk reviews basic techniques such as the display of filters and tensors, as well as more advanced ones that try to interpret which part of the input data is responsible for the predictions, or generate data that maximizes the activation of certain neurons.
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks or Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles of deep learning from both an algorithmic and computational perspectives.
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks or Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles of deep learning from both an algorithmic and computational perspectives.
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks or Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles of deep learning from both an algorithmic and computational perspectives.
https://telecombcn-dl.github.io/dlai-2020/
Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of large-scale annotated datasets and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which were previously addressed with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks or Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles of deep learning from both an algorithmic and computational perspectives.
https://telecombcn-dl.github.io/drl-2020/
This course presents the principles of reinforcement learning as an artificial intelligence tool based on the interaction of the machine with its environment, with applications to control tasks (eg. robotics, autonomous driving) o decision making (eg. resource optimization in wireless communication networks). It also advances in the development of deep neural networks trained with little or no supervision, both for discriminative and generative tasks, with special attention on multimedia applications (vision, language and speech).
Giro-i-Nieto, X. One Perceptron to Rule Them All: Language, Vision, Audio and Speech. In Proceedings of the 2020 International Conference on Multimedia Retrieval (pp. 7-8).
Tutorial page:
https://imatge.upc.edu/web/publications/one-perceptron-rule-them-all-language-vision-audio-and-speech-tutorial
Deep neural networks have boosted the convergence of multimedia data analytics in a unified framework shared by practitioners in natural language, vision and speech. Image captioning, lip reading or video sonorization are some of the first applications of a new and exciting field of research exploiting the generalization properties of deep neural representation. This tutorial will firstly review the basic neural architectures to encode and decode vision, text and audio, to later review the those models that have successfully translated information across modalities.
Image segmentation is a classic computer vision task that aims at labeling pixels with semantic classes. These slides provide an overview of the basic approaches applied from the deep learning field to tackle this challenge and presents the basic subtasks (semantic, instance and panoptic segmentation) and related datasets.
Presented at the International Summer School on Deep Learning (ISSonDL) 2020 held online and organized by the University of Gdansk (Poland) between the 30th August and 2nd September.
http://2020.dl-lab.eu/virtual-summer-school-on-deep-learning/
https://imatge-upc.github.io/rvos-mots/
Video object segmentation can be understood as a sequence-to-sequence task that can benefit from the curriculum learning strategies for better and faster training of deep neural networks. This work explores different schedule sampling and frame skipping variations to significantly improve the performance of a recurrent architecture. Our results on the car class of the KITTI-MOTS challenge indicate that, surprisingly, an inverse schedule sampling is a better option than a classic forward one. Also, that a progressive skipping of frames during training is beneficial, but only when training with the ground truth masks instead of the predicted ones.
Deep neural networks have achieved outstanding results in various applications such as vision, language, audio, speech, or reinforcement learning. These powerful function approximators typically require large amounts of data to be trained, which poses a challenge in the usual case where little labeled data is available. During the last year, multiple solutions have been proposed to leverage this problem, based on the concept of self-supervised learning, which can be understood as a specific case of unsupervised learning. This talk will cover its basic principles and provide examples in the field of multimedia.
More from Universitat Politècnica de Catalunya (20)
As Europe's leading economic powerhouse and the fourth-largest hashtag#economy globally, Germany stands at the forefront of innovation and industrial might. Renowned for its precision engineering and high-tech sectors, Germany's economic structure is heavily supported by a robust service industry, accounting for approximately 68% of its GDP. This economic clout and strategic geopolitical stance position Germany as a focal point in the global cyber threat landscape.
In the face of escalating global tensions, particularly those emanating from geopolitical disputes with nations like hashtag#Russia and hashtag#China, hashtag#Germany has witnessed a significant uptick in targeted cyber operations. Our analysis indicates a marked increase in hashtag#cyberattack sophistication aimed at critical infrastructure and key industrial sectors. These attacks range from ransomware campaigns to hashtag#AdvancedPersistentThreats (hashtag#APTs), threatening national security and business integrity.
🔑 Key findings include:
🔍 Increased frequency and complexity of cyber threats.
🔍 Escalation of state-sponsored and criminally motivated cyber operations.
🔍 Active dark web exchanges of malicious tools and tactics.
Our comprehensive report delves into these challenges, using a blend of open-source and proprietary data collection techniques. By monitoring activity on critical networks and analyzing attack patterns, our team provides a detailed overview of the threats facing German entities.
This report aims to equip stakeholders across public and private sectors with the knowledge to enhance their defensive strategies, reduce exposure to cyber risks, and reinforce Germany's resilience against cyber threats.
Levelwise PageRank with Loop-Based Dead End Handling Strategy : SHORT REPORT ...Subhajit Sahu
Abstract — Levelwise PageRank is an alternative method of PageRank computation which decomposes the input graph into a directed acyclic block-graph of strongly connected components, and processes them in topological order, one level at a time. This enables calculation for ranks in a distributed fashion without per-iteration communication, unlike the standard method where all vertices are processed in each iteration. It however comes with a precondition of the absence of dead ends in the input graph. Here, the native non-distributed performance of Levelwise PageRank was compared against Monolithic PageRank on a CPU as well as a GPU. To ensure a fair comparison, Monolithic PageRank was also performed on a graph where vertices were split by components. Results indicate that Levelwise PageRank is about as fast as Monolithic PageRank on the CPU, but quite a bit slower on the GPU. Slowdown on the GPU is likely caused by a large submission of small workloads, and expected to be non-issue when the computation is performed on massive graphs.
Opendatabay - Open Data Marketplace.pptxOpendatabay
Opendatabay.com unlocks the power of data for everyone. Open Data Marketplace fosters a collaborative hub for data enthusiasts to explore, share, and contribute to a vast collection of datasets.
First ever open hub for data enthusiasts to collaborate and innovate. A platform to explore, share, and contribute to a vast collection of datasets. Through robust quality control and innovative technologies like blockchain verification, opendatabay ensures the authenticity and reliability of datasets, empowering users to make data-driven decisions with confidence. Leverage cutting-edge AI technologies to enhance the data exploration, analysis, and discovery experience.
From intelligent search and recommendations to automated data productisation and quotation, Opendatabay AI-driven features streamline the data workflow. Finding the data you need shouldn't be a complex. Opendatabay simplifies the data acquisition process with an intuitive interface and robust search tools. Effortlessly explore, discover, and access the data you need, allowing you to focus on extracting valuable insights. Opendatabay breaks new ground with a dedicated, AI-generated, synthetic datasets.
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Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
1. Day 4 Lecture 5
Medical Imaging
Elisa Sayrol
elisa.sayrol@upc.edu
[course site]
2. 2
Medical Imaging
Interest in this area in Deep Learning:
DeepDeep Deep LearningDeep Learning Deep Learning ApplicationsDeep Learning Applications Deep Learning
Applications toDeep Learning Applications to Medical Deep Learning Applications to Medical ImageDeep Learning
Applications to Medical Image Deep Learning Applications to Medical Image Analysis, Prof. Dinggang Shen, Univ.
of North Carolina, USA
From DBNs to Deep ConvNets: Pushing the State of the Art in Medical Image Analysis, Prof. Gustavo Carneiro,
University Adelaide, Australia
3. 3
Medical Imaging
Interest in this area in Deep Learning (MICCAI):
• Image description by means of deep learning techniques;
• Medical imaging-based diagnosis using deep learning;
• Medical signal-based diagnosis using deep learning;
• Medical image reconstruction using deep learning;
• Deep learning model selection;
• Meta-heuristic techniques for fine-tuning parameter in deep learning-based architectures;
• Deep learning-oriented applications.
Applications:
Breast cancer detection; skin lesion detection; organs recognition; image-based disease
identification; Chest Radiograph Categorization with Deep Feature Selection; Cell Detection and
recognition; Brain segmentation of tumor, stroke lesions and injuries
4. Detection of Malaria parasites in blood samples
(Project done at UPC)
Prof. Margarita Cabrera; Josep Vidal; Daniel López Codina (Physics department)
Students: Jaume Fernández (Ms in Telecom),…
Collaboration with Drassanes Tropical Medicine and International Health Unit
5. Detection of Malaria parasites in blood samples
(Project done at UPC)
▪
▪
▪
▪
Yuanpu Xie, Fuyong Xing, Xiangfei Kong, Hai Su, Lin Yang, "Beyond Classification: Structured Regression For Robust Cell
Detection Using Beyond Classification: Structured Regression For Robust Cell Detection Using ConvolutionalBeyond
Classification: Structured Regression For Robust Cell Detection Using Convolutional Neural Network", MICCAI 2015.
13. Brain Tumor Segmentation (Starting Project at UPC)
Prof. Verónica Vilaplana
Students: Adrià Casamitjana, Santi Puch, Asier Aduriz, Marcel Catà
Interest to participate in a Brain Lesion Challenge
Satellite event of MICCAI 2016
Int. Conf. on Medical Image Computing & Computer Assisted Intervention
BRAINLES: Brain Lesion Workshop and Challenges on Brain Tumor and Stroke
Lesion Analysis, Traumatic Brain Injury.
Three challenges:
BRATS: brain tumor analysis DUE 31st of July 2016!!!!
ISLES: stroke lesion analysis
mTOP: traumatic brain injury
14. Brats: multimodal brain tumor segmentation Challenge
Preprocessing: All data sets have been aligned to the same anatomical template and
interpolated to 1mm3
voxel resolution.
Data: The data set contains about 300 high- and low- grade glioma cases. Each data set
has T1 MRI, T1 contrast-enhanced MRI, T2 MRI, and T2 FLAIR MRI volumes.
Annotations comprise the whole tumor, the tumor core (including cystic areas), and the
Gd-enhanced tumor core
15. FIGURE: Manual annotation through expert raters. Shown are image patches with the tumor structures
that are annotated in the different modalities (top left) and the final labels for the whole dataset (right).
The image patches show from left to right: the whole tumor visible in FLAIR (Fig. A), the tumor core
visible in T2 (Fig. B), the enhancing tumor structures visible in T1c (blue), surrounding the cystic/necrotic
components of the core (green) (Fig. C). The segmentations are combined to generate the final labels of
the tumor structures (Fig. D): edema (yellow), non-enhancing solid core (red), necrotic/cystic core
(green), enhancing core (blue). (Figure from the BRATS TMI reference paper.)
Brats: multimodal brain tumor segmentation Challenge
16. Example: “DeepMedic”
Efficient Multi-Scale 3D CNN with fully connected CRF for Accurate Brain Lesion
Segmentation, Konstantinos Kamnitsas, et al. 2016
• Efficient hybrid training shceme
• Use of 3D deeper networks
• Parallel convolutional pathways for multi-scale processing
• Results on BRATS 2015
18. Deeper Networks
Advantatges:
More discriminative power
Disadvantatges:
Computationally expensive
Additional trainable parameters
Solution: smaller kernels will both reduce the number of operations and the number of parameters
(by 53
/ 33
⋍ 4.6)
Build the deeper network on the baseline
CNN by inserting extra layers in between
20. Results
DeepMedic shows
improvements due to its
additional information and no
to its increasing capacity
Ensemble: combination of 3
networks (due to
randomness, same
architecture) to clear
unbiased errors of the
network
21. 21
Medical Imaging Summary
•Interest in the Area of Medical Imaging in Deep Learning:
•ISBI 2016. MICCAI Tutorials 2015:
Deep Learning Applications to Medical Image Analysis, Prof. Dinggang Shen, Univ. of North
Carolina, USA
From DBNs to Deep ConvNets: Pushing the State of the Art in Medical Image Analysis, Prof.
Gustavo Carneiro, University Adelaide, Australia
•Example 1:
•Malaria Parasite Detection in Blood Samples using ConvNets (UPC)
•Yuanpu Xie, Fuyong Xing, Xiangfei Kong, Hai Su, Lin Yang, "Beyond Classification: Structured
Regression For Robust Cell Detection Using Convolutional Neural Network", MICCAI 2015
•Example 2:
•Brats: Challenge in brain tumor analysis
•Efficient Multi-Scale 3D CNN with fully connected CRF for Accurate Brain Lesion
Segmentation, Konstantinos Kamnitsas, et al. 2016