video on YouTube
https://www.youtube.com/watch?v=NLmonT3GUHE
https://www.youtube.com/watch?v=NLmonT3GUHE
Polymerase Chain Reaction, PCR
is a method widely used in molecular biology to rapidly make millions to billions of copies of a specific DNA sample allowing scientists to take a very small sample of DNA and amplify it to a large enough amount to study in detail.
This PPT shows the general information about PCR principles and gene expression analysis. It might be useful for researchers, students working in the field of molecular biology and genomics.
PCR is a biochemical technology in molecular biology. This technique used in DNA cloning for sequencing, gene cloning and manipulating, diagnosis of hereditary diseases.
This PPT shows the general information about PCR principles and gene expression analysis. It might be useful for researchers, students working in the field of molecular biology and genomics.
PCR is a biochemical technology in molecular biology. This technique used in DNA cloning for sequencing, gene cloning and manipulating, diagnosis of hereditary diseases.
Polymerase chain reaction(PCR) is a technique used in molecular biology to amplify single copy or a few copies of a piece of DNA.
Step 1: Denature DNA
At 95C, the DNA is denatured (i.e. The two strands are separated)
Step 2: Primers Anneal
At 40C- 65C, the primers anneal (or bind to) their complementary sequences on the single strands of DNA
Step 3: DNA polymerase Extends the DNA chain
At 72C, DNA polymerase extends the DNA chain by adding nucleotides to the 3’ ends of the primers.
PCR explained in simple terms - A T G & C of PCR - Question and answers PCRajithnandanam
www.technologyinscience.blogspot.com
PCR - polymerase chain reaction explained in simple question answer format. Type in your doubts on PCR in the comment.
PCR- Steps;Applications and types of PCR (Exam point of view)Sijo A
The term PCR stands for Polymerase Chain Reaction.
It is an invitro amplification technique that allows synthesizing millions of copies of the DNA or gene of interest from a single copy.
It is called “Polymerase” because the only enzyme used in this reaction is DNA polymerase.
The PCR is invented by Kary Mullis in 1985.He received Nobel Prize in Chemistry in 1993.
Polymerase chain reaction(PCR) is a technique used in molecular biology to amplify single copy or a few copies of a piece of DNA.
Step 1: Denature DNA
At 95C, the DNA is denatured (i.e. The two strands are separated)
Step 2: Primers Anneal
At 40C- 65C, the primers anneal (or bind to) their complementary sequences on the single strands of DNA
Step 3: DNA polymerase Extends the DNA chain
At 72C, DNA polymerase extends the DNA chain by adding nucleotides to the 3’ ends of the primers.
PCR explained in simple terms - A T G & C of PCR - Question and answers PCRajithnandanam
www.technologyinscience.blogspot.com
PCR - polymerase chain reaction explained in simple question answer format. Type in your doubts on PCR in the comment.
PCR- Steps;Applications and types of PCR (Exam point of view)Sijo A
The term PCR stands for Polymerase Chain Reaction.
It is an invitro amplification technique that allows synthesizing millions of copies of the DNA or gene of interest from a single copy.
It is called “Polymerase” because the only enzyme used in this reaction is DNA polymerase.
The PCR is invented by Kary Mullis in 1985.He received Nobel Prize in Chemistry in 1993.
The polymerase chain reaction (PCR) is a relatively simple technique that amplifies a DNA template to produce specific DNA fragments in vitro. Traditional methods of cloning a DNA sequence into a vector and replicating it in a living cell often require days or weeks of work, but amplification of DNA sequences by PCR requires only hours. While most biochemical analyses, including nucleic acid detection with radioisotopes, require the input of significant amounts of biological material, the PCR process requires very little. Thus, PCR can achieve more sensitive detection and higher levels of amplification of specific sequences in less time than previously used methods. These features make the technique extremely useful, not only in basic research, but also in commercial uses, including genetic identity testing, forensics, industrial quality control and in vitro diagnostics. Basic PCR is commonplace in many molecular biology labs where it is used to amplify DNA fragments and detect DNA or RNA sequences within a cell or environment. However, PCR has evolved far beyond simple amplification and detection, and many extensions of the original PCR method have been described. This chapter provides an overview of different types of PCR methods, applications and optimization.
A detailed description about the basic steps involved in the - PCR - Polymerase Chain Reaction, its applications,its limitations and steps to overcome it.
SARS-CoV-2 Real-TM | SACACE
----------------------------------------------------
is Real-Time PCR test for the Qualitative detection of SARS-CoV-2 (COVID-19
virus, 2019-nCoV) RNA in clinical samples.
Severe acute respiratory syndrome coronavirus 2
Coronaviruses are a large family of ribonucleic acid (RNA) viruses.
is a new strain which has not previously been identified in humans.
known also as 2019 novel coronavirus(2019-nCoV).
Translation
is the process in which ribosomes in the cytoplasm or ER synthesize proteins after the process of transcription of DNA to RNA in the cell's nucleus. The entire process is called gene expression.
Protein
Are large biomolecules, or macromolecules, consisting of one or more long chains of amino acid residues
--------------------------------------------------------------------------------------------
on youtube
https://www.youtube.com/watch?v=XbKP98oLDsM
-------------------------------------------------------------------------------------------
.
Maxwell® RSC
Rapid Sample concentrator
Instrument is a compact, automated nucleic acid purification platform that processes up to (16 or 48) samples simultaneously
Splicing , Spliceosome , Remove Introns
Remove of Intron and joining the exon together
Three Classes of RNA Splicing
Group I introns
Group II introns
Nuclear pre-mRNA
video on YouTube
https://www.youtube.com/watch?v=haGWnLpAgic
https://www.youtube.com/watch?v=haGWnLpAgic
Severe Acute Respiratory Syndrome Coronavirus 2
(SARS-CoV-2), previously known by the provisional name 2019 novel coronavirus (2019-nCoV)
Structure of Gene
Basic unit of Heredity transfer information from one generation to another
A segment / Region of DNA containing a sequent of nucleotides that encodes to RNA and to Protein
video on YouTube
https://www.youtube.com/watch?v=fYCjItN2xPs
Is an enzyme that cleaves DNA into fragments at or near specific
recognition sites within molecules known as restriction site.
Discover in 1970
Cloning vector
is a small piece of DNA Allow the foreign DNA inserted inside cell
Plasmid
Bacteriophage
Cosmid
BAC
YAC
HAC
Plasmid
Bacteriophage
Cosmid
BAC
YAC
HAC
The word Fermentation is derived from Latin word fervere which means to boil.
But the conventional definition of Fermentation is to break down of larger molecules into smaller and simple molecules using microorganisms.
In Biotechnology, Fermentation means any process by which microorganisms are grown in large quantities to produce any type of useful materials.
Organisms that are genetically identical are clones
Asexual Reproduction always produces clones
Laboratory Techniques have been developed that have allowed this to happen in Animals
The Role of Introns in Genetic Regulation
================================
Introns are sequences that interrupt open reading frames (ORFs) in RNA.
Spliceosomal introns are exclusive of eukaryotic nuclear gene transcripts, are a complex of small nuclear RNAs (snRNAs) and proteins .
Introns are crucial because the protein variety is greatly enhanced by alternative splicing in which introns take partly important roles.
Changes in the exon-intron structure of a gene can also occur, including the loss or/and gain of introns. Intron loss is important aspect of gene structural variation and plays a vital role in gene evolution.
This report focuses on the intron, its origin, classification, evolution, loss and gain, function, and the diverse roles of splicing and alternative splicing in human disease.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
2. GKM
PCR
is a method widely used in molecular biology to rapidly make millions
to billions of copies of a specific DNA sample allowing scientists to
take a very small sample of DNA and amplify it to a large enough
amount to study in detail.
Polymerase Chain Reaction
Kary Mullis94 c° 40 c° 72 c°
3. GKM
PCR
What is components required in PCR
2. DNA polymerase
Taq Polymerase
1. Template (DNA)
Thermus aquaticus
3. Mg++ (MgCl2)
half-life of 40 min at 95°C
60 bases per sec at 70 °C
can amplify lengths of about 5 kb
catalyze phosphodiester bond formation
Facilitates formation primers and
DNA templates complex
by stabilizing negative charges on
their phosphate backbones
4. GKM
PCR
4. Primers (Forward and Reverse)
Not pairing with each other
15–30 bases
Complementary
To strands
Similar melting
temperatures
5. Deoxynucleoside triphosphates
6. Buffer
Binding sites must be unique
GC content 40–60%
dGTP dATP dTTPdCTP
Suitable chemical environment for activity of DNA polymerase.
PH 8.0 and 9.5