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OLIGOMERIC
 ENZYMES
What are enzymes?

Enzymes are proteins which act as catalysts
                    Catalyst :
 A catalyst is something which by its very nature
 increases the rate of a reaction and remain
 uncharged at the end of reaction.
catalyst




enzyme

                    3
 Enzymes control and regulate the

  various metabolic activities inside

  living cells.




                                        4
The definition of enzymes?

Enzymes are powerful and highly effectual
biocatalyst produced by living tissues which
increase the rate of reactions that occur in the
tissue.
What are enzymes made up of ?

Almost all enzymes are make up of proteins
Monomeric enzymes
Monomeric enzymes only contains tertiary structure




                       monomeric sarcosineoxidase
 trypsin

                                                     11
Chymotypsin and trypsin
                          12
Oligomeric enzymes
contains two or more polypeptide chains associated by
noncovalent forces.




              Oligomeric enzyme                         14
Zymogen
 Several enzymes are produced and stored as
inactive precursors called zymogens
               Isozymes
Enzymes which catalyze the same reaction but
have different primary and quaternary structure.


The most common isozymes are polymeric
enzymes.
May have similar but not identical amino acid
sequences.
May have common evolutionary origin.               15
Oligomeric enzymes consist of two or more
polypeptide chains which are usually linked to
each other by non covalent interactions and
never by peptide bonds. The component
polypeptide chains are termed sub-units and
may be identical ,they are some times called
protomers. Dimeric proteins consist of
two,trimeric proteins of three and tetrameric
proteins of four sub-units. The molecular
weight is usually in excess of 35000.
The vast majority of known enzymes are
oligomeric for example ,all of the enzymes
involved in glycolysis process either two or four
sub-units. It is therefore, reasonable to assume
that the sub-units of oligomeric proteins in
association that they do not have in isolation.
such enzymes are not synthesized as inactive
zymogens, but their activities may be regulated
in a far more precise way by feed-back
inhibition. This is possible because many
oligomeric proteins exhibit allostery their
different binding sites interact.
LACTATE DEHYDROGENSE
 Vertebrate LDH is an ex of oligomeric enzyme
where each subunit has the same function ,in this
         case to catalise the reaction


  CH3.CH.CO2‫ + ־‬NAD+        CH3.C=O.CO2‫־‬
        |                         || PYRUVATE


       OH                        O


     (S)-LACTATE              + NADH + H+
   e.g. LDH(lactate dehydrogenase)   LDH

1,2,3,4,5    are HHHH, HHHM, HHMM,

HMMM and MMMM . i.e. LDH isozymes

are tetramers formed by 2 sets of subunits.




                                              19
20
Significance :
 In the heart, LDH1 (4 H) H=heart, catalyzes Lactate
convert to pyruvate for energy supply
 In muscles, LDH5 ( 4M ) M=muscle, convert pyr to
Lact. For energy storage
 Clinical diagnosis using isozyme. E.g. when heart
attack(infarction) happens, enzymes release from
injured cells to the blood showed different
enzyme(isozyme ) pattern.
 Isozyme pattern: different isozymes appear as a
peak sooner or later followed by the progress of the
disease.
                                                        22
LACTSOSE SYNTHASE
• Mammary gland lactose synthase is an example
  of oligomeric enzyme where a non functional sub
  unit modifies the behavior of a functional sub
  unit. This enzyme as isolated from milk , consist
  of two subunits: one of these catalytically
  inactive protein , α-lactalbumin , found only in
  mammary gland; the other is N-acetyl
  lactosaminesynthase, an enzyme present in most
  tissues .
• is N-acetyl lactosaminesynthase, in the absence
  of α-lactalbumin, catalyses the reaction
This is important in the synthesis of the carbohydrate
components of glycoprotein's, the enzyme is also
produced and stored in the mammary gland during
pregnancy ,when levels of α-lactalbumin are low. After the
birth of the baby, reduced synthesis of the hormone
progesterone in the mother leads to increased synthesis
of the luteotrophic hormone (prolactin), stimulating the
production of alpha lactalbumin in the mammary gland.
This combines with the stored is N-acetyl lactosamine
synthase to form lactose synthase an enzyme which
speculates production of the lactose components lactose
synthase, an enzyme with facilitates the production of the
lactose components of the milk required for the newborn
baby. Lactose synthase catalyses the reaction:
UDP-galactose + glucose           UDP + lactose
TRYPTOPHAN SYNTHASE
•  Tryptophan synthase of E.coli is an ex of oligomeric
  enzyme which contains two different functional sub-
  units the enzyme catalyses the reaction
• Indole-3-glyserolphasphate+L-serine        Pyridoxal phosphate



•            L-tryptophan+glyceraldehyde-3-phosphate
• It can be dissociated into two or further units, each of
  molecular weight 29000 and a beta-2 subunit, of
  molecular weight 90000, the beta-2 subunit further
  dissociates the presence of 4 M urea to give two beta
  subunits, each of which has a binding site for the co-
  enzyme pyrodoxal phosphate.
• The isolated alpha-subunit will catalyze the reaction:
• Indole-3-glyserolphasphate indole + glyceraldehyde-3-
  phosphate.
• The isolated beta-subunit also has catalytic activity but
  for the reaction:   Pyridoxal phosphate
PYRUVATE DEHYDROGENASE
• The same type of organization as tryptophan
  synthase, but on an even larger scale. The
  Enzyme Commission recommended that such a
  complex should be regarded as a system of
  separate enzymes rather than as single enzyme.

• Pyruvate dehydrogenase enables pyruvate to
  enter the TCA Cycle by, catalyzing its overall
  conversion to acetyl-coA:
• Pyruvate + Co ASH + NAD+        acetyl– CoA +
•                                     CO2 + NADH.
several factors contribute to enzyme catalysis


       1. Proximity effects and orientation
       arrange:
        2. Electrostatic effects
        3. Acid-base catalysis
        4. Covalent Catalysis


                                              27
THANK YOU…

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Enzymes

  • 2. What are enzymes? Enzymes are proteins which act as catalysts Catalyst : A catalyst is something which by its very nature increases the rate of a reaction and remain uncharged at the end of reaction.
  • 4.  Enzymes control and regulate the various metabolic activities inside living cells. 4
  • 5.
  • 6. The definition of enzymes? Enzymes are powerful and highly effectual biocatalyst produced by living tissues which increase the rate of reactions that occur in the tissue.
  • 7. What are enzymes made up of ? Almost all enzymes are make up of proteins
  • 8.
  • 9.
  • 10.
  • 11. Monomeric enzymes Monomeric enzymes only contains tertiary structure monomeric sarcosineoxidase trypsin 11
  • 13.
  • 14. Oligomeric enzymes contains two or more polypeptide chains associated by noncovalent forces. Oligomeric enzyme 14
  • 15. Zymogen Several enzymes are produced and stored as inactive precursors called zymogens Isozymes Enzymes which catalyze the same reaction but have different primary and quaternary structure. The most common isozymes are polymeric enzymes. May have similar but not identical amino acid sequences. May have common evolutionary origin. 15
  • 16. Oligomeric enzymes consist of two or more polypeptide chains which are usually linked to each other by non covalent interactions and never by peptide bonds. The component polypeptide chains are termed sub-units and may be identical ,they are some times called protomers. Dimeric proteins consist of two,trimeric proteins of three and tetrameric proteins of four sub-units. The molecular weight is usually in excess of 35000.
  • 17. The vast majority of known enzymes are oligomeric for example ,all of the enzymes involved in glycolysis process either two or four sub-units. It is therefore, reasonable to assume that the sub-units of oligomeric proteins in association that they do not have in isolation. such enzymes are not synthesized as inactive zymogens, but their activities may be regulated in a far more precise way by feed-back inhibition. This is possible because many oligomeric proteins exhibit allostery their different binding sites interact.
  • 18. LACTATE DEHYDROGENSE Vertebrate LDH is an ex of oligomeric enzyme where each subunit has the same function ,in this case to catalise the reaction CH3.CH.CO2‫ + ־‬NAD+ CH3.C=O.CO2‫־‬ | || PYRUVATE OH O (S)-LACTATE + NADH + H+
  • 19. e.g. LDH(lactate dehydrogenase) LDH 1,2,3,4,5 are HHHH, HHHM, HHMM, HMMM and MMMM . i.e. LDH isozymes are tetramers formed by 2 sets of subunits. 19
  • 20. 20
  • 21.
  • 22. Significance :  In the heart, LDH1 (4 H) H=heart, catalyzes Lactate convert to pyruvate for energy supply  In muscles, LDH5 ( 4M ) M=muscle, convert pyr to Lact. For energy storage  Clinical diagnosis using isozyme. E.g. when heart attack(infarction) happens, enzymes release from injured cells to the blood showed different enzyme(isozyme ) pattern.  Isozyme pattern: different isozymes appear as a peak sooner or later followed by the progress of the disease. 22
  • 23. LACTSOSE SYNTHASE • Mammary gland lactose synthase is an example of oligomeric enzyme where a non functional sub unit modifies the behavior of a functional sub unit. This enzyme as isolated from milk , consist of two subunits: one of these catalytically inactive protein , α-lactalbumin , found only in mammary gland; the other is N-acetyl lactosaminesynthase, an enzyme present in most tissues . • is N-acetyl lactosaminesynthase, in the absence of α-lactalbumin, catalyses the reaction
  • 24. This is important in the synthesis of the carbohydrate components of glycoprotein's, the enzyme is also produced and stored in the mammary gland during pregnancy ,when levels of α-lactalbumin are low. After the birth of the baby, reduced synthesis of the hormone progesterone in the mother leads to increased synthesis of the luteotrophic hormone (prolactin), stimulating the production of alpha lactalbumin in the mammary gland. This combines with the stored is N-acetyl lactosamine synthase to form lactose synthase an enzyme which speculates production of the lactose components lactose synthase, an enzyme with facilitates the production of the lactose components of the milk required for the newborn baby. Lactose synthase catalyses the reaction: UDP-galactose + glucose UDP + lactose
  • 25. TRYPTOPHAN SYNTHASE • Tryptophan synthase of E.coli is an ex of oligomeric enzyme which contains two different functional sub- units the enzyme catalyses the reaction • Indole-3-glyserolphasphate+L-serine Pyridoxal phosphate • L-tryptophan+glyceraldehyde-3-phosphate • It can be dissociated into two or further units, each of molecular weight 29000 and a beta-2 subunit, of molecular weight 90000, the beta-2 subunit further dissociates the presence of 4 M urea to give two beta subunits, each of which has a binding site for the co- enzyme pyrodoxal phosphate. • The isolated alpha-subunit will catalyze the reaction: • Indole-3-glyserolphasphate indole + glyceraldehyde-3- phosphate. • The isolated beta-subunit also has catalytic activity but for the reaction: Pyridoxal phosphate
  • 26. PYRUVATE DEHYDROGENASE • The same type of organization as tryptophan synthase, but on an even larger scale. The Enzyme Commission recommended that such a complex should be regarded as a system of separate enzymes rather than as single enzyme. • Pyruvate dehydrogenase enables pyruvate to enter the TCA Cycle by, catalyzing its overall conversion to acetyl-coA: • Pyruvate + Co ASH + NAD+ acetyl– CoA + • CO2 + NADH.
  • 27. several factors contribute to enzyme catalysis 1. Proximity effects and orientation arrange: 2. Electrostatic effects 3. Acid-base catalysis 4. Covalent Catalysis 27

Editor's Notes

  1. Enzyme is not like any normal catalyst, because it’s a protein, a biological molecule. E are very important in body because without them, almost all activities in body wouldn’t take place.
  2. Metabolic activitiesj, metabolism could be described as all the chemical and phsical reactions that take place in order to maintain growth and normal functioning.
  3. Primary and three dimensional structure
  4. Oxidoreductases transferases hydrolases lyases isomerases ligases
  5. One polypeptide
  6. this chymotrypsin and trysin have similar structure sequentially have similar function.there can cut protein chain. All three have a ser at 195, his at 57, Asp at 102
  7. Single polypeptide don’t have catalytic activity.