1. During cleavage, cells divide rapidly through mitosis but do not grow in size. Cell cycling is controlled by cyclin synthesis and degradation, which regulates the activity of MPF and progression through the cell cycle.
2. Cleavage patterns vary between species, from radial in sea urchins to spiral in snails to bilateral in tunicates. Gastrulation occurs through various cell movements and generally establishes the three body axes.
3. Cell fate specification occurs through different mechanisms in different species, including maternal cytoplasmic determinants, cell signaling, and cell-cell interactions. Axes can be established before or after fertilization.
this presentation includes morphological and biochemical changes that takes place during amphibian metamorphosis. it also includes hormonal control and coordination during metamorphosis.
scott gilbert 6th edition is a very good book for this topic.
also available on net on ncbi site
happy studying :)
How 3 germ layers are formed in Chick that are endoderm, mesoderm and ectoderm.As Chick are polylecithal so cell movements are somewhat restricted and gastrulation is modified as compared to frog.
this presentation includes morphological and biochemical changes that takes place during amphibian metamorphosis. it also includes hormonal control and coordination during metamorphosis.
scott gilbert 6th edition is a very good book for this topic.
also available on net on ncbi site
happy studying :)
How 3 germ layers are formed in Chick that are endoderm, mesoderm and ectoderm.As Chick are polylecithal so cell movements are somewhat restricted and gastrulation is modified as compared to frog.
Chap 5 Cleavage. it's types and patternsSaadHumayun7
Cell division during the early stages of the embryo’s development after fertilisation is referred to as cleavage in embryology. Zygotes of several species possess rapid cell cycle progression without considerable overall growth, resulting in a group of cells of identical size as the initial zygote. The diverse cells produced by cleavage are known as blastomeres, and they group together to form a solid mass known as the morula. The development of the blastula, or the blastocyst in animals, indicates the termination of cleavage.
The mitotic division begins as the zygote travels through the isthmus of the oviduct, termed cleavage, towards the uterus and produces 2, 4, 8, and 16 daughter cells (blastomeres). A morula is an embryo that has 8 to 16 blastomeres. As it progresses into the uterus, the morula continues dividing and develops into a blastocyst.
The transformation from fertilisation to cleavage results from the activation of a mitosis-promoting factor (MPF).Cleavage of Zygote
Human zygote cleavage begins inside the fallopian tube. It is holoblastic, dividing the zygote fully into blastomeres or daughter cells.
After fertilisation, the first cleavage occurs about 24 to 30 hours later. It creates two blastomeres by longitudinally dividing the zygote (one mildly larger than the other).
The second cleavage takes place forty hours later.
After fertilisation, there is a third cleavage approximately 72 hours later. During these early cleavages, the young embryo progresses down the fallopian tube towards the uterus.
The embryo enters the uterus at the end of the fourth day. It is referred to as morula and resembles a mulberry. There are 32 cells in this solid morula. The cleavage is radial and of an indeterminate kind in human zygotes.
Cell Cleavage Mechanism
The zygote begins cleaving once fertilisation occurs, and a new organism starts to develop. Cleavage furrow refers to the area where cleavage begins.Two coordinated mechanisms combine to produce cleavage.
Karyokinesis, or the division of the nucleus during mitosis, is the first of these cyclic mechanisms. The mechanical force behind this division is the mitotic spindle, which has microtubules made of tubulin (a protein that comprises the sperm flagellum).
Cytokinesis, or cell division, is the second phase. An actin-based contractile ring of microfilaments serves as the mechanical force behind cytokinesis.
The initiation of zygotic transcription and the termination of cleavage coincides. This transitional stage in non-mammals is known as the mid-blastula transition and is regulated by the nuclear-to-cytoplasmic ratio.
Types of Cleavage
During the cleavage period, there is a significant degree of reorganisation, and the cytoplasmic contents primarily determine the types of cleavage.
Determinate Cleavage
Determinate cleavage, also known as mosaic cleavage, is a type of cleavage based on the potency of blastomeres where each blastomere has a predetermined developmental fate and is not qualita
In developmental biology, an embryo is divided into two hemispheres.pdfsharnapiyush773
In developmental biology, an embryo is divided into two hemispheres: the animal pole and the
vegetal pole within a blastula.
The animal pole consists of small cells that divide rapidly, in contrast with the vegetal pole
below it. In some cases, the animal pole is thought to differentiate into the later embryo itself,
forming the three primary germ layers and participating in gastrulation.
The vegetal pole contains large yolky cells that divide very slowly, in contrast with the animal
pole above it. In some cases, the vegetal pole is thought to differentiate into the extraembryonic
membranes that protect and nourish the developing embryo, such as the placentain mammals and
the chorion in birds.
The development of the animal-vegetal axis occurs prior to fertilisation. Sperm entry can occur
anywhere in the animal hemisphere. The point of sperm entry defines the dorso-ventral axis -
cells opposite the region of sperm entry will eventually form the dorsal portion of the body
a. Males release so many sperm that the egg is covered by them.
b. The egg has a plasma membrane, a vitelline envelope, and a jelly coat.
c. Acrosome enzymes digest away the zona pellucida around the egg as it extrudes a filament
that attaches to a receptor on the vitelline jelly layer envelope.
d. This interaction between filament and receptor is a lock-and-key reaction that is species-
specific.
e. The egg plasma membrane and the sperm nuclear membrane fuse, allowing the nucleus to
enter.
f. Fusion takes place and the zygote begins development.
g. As soon as the plasma membranes of sperm and egg fuse, the plasma membrane and the
vitelline envelope undergo changes that prevent entrance of any other sperm.
h. The vitelline envelope now becomes the fertilization envelope.
Early Developmental Stages
1. Development includes events and processes that occur as a single cell becomes a complex
organism.
2. All chordate embryos go through same early developmental stages: zygote, morula, blastula,
early and late gastrula.
3. The presence of yolk, dense nutrient material, affects how the embryonic cells complete the
first three stages.
4. Following fertilization, a zygote undergoes cleavage, cell division without growth.
a. DNA replication and mitosis occur repeatedly; the cells get smaller each division.
b. As deuterostomes, lancelets have a radial and indeterminate pattern of cleavage.
1) In radial cleavage, any plane passing through will divide the embryo into symmetrical halves.
2) In indeterminate cleavage, cells have not differentiated; if separated, each one develops a
complete organism.
5. Because the lancelet has little yolk, the cell divisions are equal in the resulting morula.
6. A cavity called the blastocoel develops forming the hollow ball called the blastula.
7. Gastrulation is invagination of some cells of the blastocyst into blastocoel to form three
primary germ layers.
a. The outer layer of cells becomes the ectoderm.
b. The inner layer of cells becomes the endoderm.
c.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
The increased availability of biomedical data, particularly in the public domain, offers the opportunity to better understand human health and to develop effective therapeutics for a wide range of unmet medical needs. However, data scientists remain stymied by the fact that data remain hard to find and to productively reuse because data and their metadata i) are wholly inaccessible, ii) are in non-standard or incompatible representations, iii) do not conform to community standards, and iv) have unclear or highly restricted terms and conditions that preclude legitimate reuse. These limitations require a rethink on data can be made machine and AI-ready - the key motivation behind the FAIR Guiding Principles. Concurrently, while recent efforts have explored the use of deep learning to fuse disparate data into predictive models for a wide range of biomedical applications, these models often fail even when the correct answer is already known, and fail to explain individual predictions in terms that data scientists can appreciate. These limitations suggest that new methods to produce practical artificial intelligence are still needed.
In this talk, I will discuss our work in (1) building an integrative knowledge infrastructure to prepare FAIR and "AI-ready" data and services along with (2) neurosymbolic AI methods to improve the quality of predictions and to generate plausible explanations. Attention is given to standards, platforms, and methods to wrangle knowledge into simple, but effective semantic and latent representations, and to make these available into standards-compliant and discoverable interfaces that can be used in model building, validation, and explanation. Our work, and those of others in the field, creates a baseline for building trustworthy and easy to deploy AI models in biomedicine.
Bio
Dr. Michel Dumontier is the Distinguished Professor of Data Science at Maastricht University, founder and executive director of the Institute of Data Science, and co-founder of the FAIR (Findable, Accessible, Interoperable and Reusable) data principles. His research explores socio-technological approaches for responsible discovery science, which includes collaborative multi-modal knowledge graphs, privacy-preserving distributed data mining, and AI methods for drug discovery and personalized medicine. His work is supported through the Dutch National Research Agenda, the Netherlands Organisation for Scientific Research, Horizon Europe, the European Open Science Cloud, the US National Institutes of Health, and a Marie-Curie Innovative Training Network. He is the editor-in-chief for the journal Data Science and is internationally recognized for his contributions in bioinformatics, biomedical informatics, and semantic technologies including ontologies and linked data.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
1. An Introduction to Early Developmental
Processes
The Early Development of Sea Urchins
The Early Development of Snails
Early Development in Tunicates
Early Development of the Nematode
Caenorhabditis elegans
3. Cleavage
Cell Cycle Control
Initially, factors stored in the egg control cleavage (the
cell cycle);
e.g. stored mRNAs
stored proteins
….. initiate the cell division
Mitosis Promoting Factor (MPF) stimulates the cell cycle
5. Cleavage-Stage Cell Cycle-
blastomeres
MPF – mitosis promoting factor:
-Cyclin B – controls cdc2 activity
-cdc2 = cyclin dependent Kinase
CDK phosphorylates histones,
etc.
#Cyclin B degrades; cell division
stops
Cyclin B presence/degradation
controlled by egg cytoplasmic
proteins
6. Mid Blastula Transition (MBT)
-the rate of cleavage decreases, the blastomeres
become motile, and nuclear genes begin to be
transcribed.
#Cleavage begins soon after fertilization and ends shortly
after the stage when the embryo achieves a new balance
between nucleus and cytoplasm.
7. Post Cleavage Cell
Cycle
Post MBT:
• Cell cycle adds two
G phases
• New mRNA
transcription
• Cell division
becomes
asynchronous
10. Cleavage Patterns
Cleavage
Rapid cell divisions
Divisions of fertilized egg into many cells
*What influences the pattern of cleavage in a particular organism?
11.
12. Gastrulation
the process of highly coordinated cell and tissue movements whereby the
cells of the blastula are dramatically rearranged
19. Sea Urchin Cell Fate
Cells are specified by either: Asymmetric distribution of patterning molecules
into particular cells or cell-cell interactions
Mechanisms for establishing asymmetry:
1. Patterning molecules bound to egg cytoskeleton
2. Molecules actively transported along the cytoskeleton
3. Molecules become associated with one centrosome, and then follow that
centrosome into one of the two mitotic sister cells
Once asymmetry is established, one cell can specify another (and
participate in reciprocal inductions)
30. Snail Development
Why does removal of the D blastomere or its first
or second derivatives result in incomplete
larvae?
If D blastomeres don’t directly contribute cells to
formation of many structures why are they so
important to the formation of the same
structures?
35. Tunicate Development
What evidence is there of autonomous
specification in tunicate blastomeres?
-transplant experiments
-RNA hybridization experiments
-altering β-catenin levels in cells
36. Tunicate Development
What evidence is there for conditional specifiction?
-BMP signal from endoderm induces anterior cell to
become notocord-
-works through activation of Brachury gene
-FGF signal induces posterior cell to become
mesenchyme
37. Tunicate Development
When are the embryonic
axes established?
-dorsal-ventral – prior to first
cleavage
-anterior-posterior – prior to first
cleavage
-left-right – first cleavage
44. 1. During cleavage, most cells do not grow. Rather, the volume of
the oocyte is cleaved into numerous cells. The major exceptions
to this rule are mammals.
2. The blastomere cell cycle is governed by the synthesis and
degradation of cyclin. Cyclin synthesis promotes the formation of
MPF, and MPF promotes mitosis. Degradation of cyclin
brings the cell back to the S phase. The G phases are added at
the midblastula transition.
3. "Blast" vocabulary: A blastomere is a cell derived from cleavage
in an early embryo. A blastula is an embryonic structure composed
of blastomeres. The cavity in the blastula is the blastocoel. If the
blastula lacks a blastocoel, it is a stereo blastula. A mammalian
blastula is called a blastocyst (in Chapter 11), and the invagination
where gastrulation begins is the blastopore.
45. 4. The movements of gastrulation include invagination, involution, ingression,
delamination, and epiboly.
5. Three axes are the foundations of the body: the anterior-posterior axis
(head to tail or mouth to anus), the dorsal-ventral axis (back to belly), and the
right-left axis (between the two lateral sides of the body).
6. In all four invertebrates described here, cleavage is holoblastic. In the sea
urchin, cleavage is radial; in the snail, spiral; in the tunicate, bilateral; and in
the nematode, rotational.
7. In the tunicate, snail, and nematode, gastrulation occurs when there are
relatively few cells, and the blastopore becomes the mouth. This is the
protostome mode of gastrulation.
8. Body axes in these species are established in different ways. In some,
such as the sea urchin and tunicate, the axes are established at fertilization
through determinants in the egg cytoplasm. In other species, such as the
nematode and snail, the axes are established by cell interactions later
in development.
46. 9. In the sea urchin, gastrulation occurs only after thousands of cells have formed, and
the blastopore becomes the anus. This is the deuterostome mode of gastrulation, and
is characteristic only of echinoderms and chordates.
10. In sea urchins, cell fates are determined by signaling. The micromeres constitute a
major signaling center. β-catenin is important for the inducing capacity of the
micromeres.
11. Differential cell adhesion is important in regulating sea urchin gastrulation. The
micromeres delaminate first from the vegetal plate. They form the primary
mesenchyme which becomes the skeletal rods of the pluteus larva. The vegetal plate
invaginates to form the endodermal archenteron, with a tip of secondary
mesenchyme cells. The archenteron elongates by convergent extension and is guided
to the future mouth region by the secondary mesenchyme.
12. Snails exhibit spiral cleavage and form stereoblastulae, having no blastocoels. The
direction of the spiral cleavage is regulated by a factor encoded by the mother and
placed into the oocyte. Spiral cleavage can be modified by evolution, and
adaptations of spiral cleavage have allowed some molluscs to survive in otherwise
harsh conditions.
47. 14. The tunicate fate map is identical on its right and left sides. The yellow
cytoplasm contains muscle-forming determinants; these act autonomously.
The nervous system of tunicates is formed conditionally, by interactions
between blastomeres.
15. The soil nematode Caenorhabditis elegans was chosen as a model
organism because it has a small number of cells, a small genome, is easily
bred and maintained, has a short lifespan, can be genetically manipulated,
and has a cuticle through which one can see cell movements.
16. In the early divisions of the C. elegans zygote, one daughter cell becomes
a founder cell (producing differentiated descendants) and the other becomes
a stem cell (producing other founder cells and the germ line).
17. Blastomere identity in C. elegans is regulated by both autonomous and
conditional specification.