Watson and Crick (1953)
The Discovery of the DNA Double Helix
• James Watson and Francis Crick published the famous double-helix structure
in 1953.
• Two additional sources of data assisted Watson and Crick with their model:
a. Erwin Chargaff’s ratios obtained for DNA derived from a variety of
sources showed that the amount of purine always equals the amount of
pyrimidine, and further, that the amount of G equals C, and the amount
of A equals T.
b. Rosalind Franklin’s X ray diffraction images of DNA showed a helical
structure with regularities at 0.34 nm and 3.4 nm along the axis of the
molecule.
Watson and Crick’s three-dimensional
model has these main features:
a. It is two polynucleotide chains
wound around each other in a
right-handed helix.
b. The two chains are antiparallel.
c. The sugar-phosphate backbones
are on the outside of the helix,
and the bases are on the inside,
stacked perpendicularly to the
long axis like the steps of a spiral
staircase.
• The 1962 Nobel Prize in Physiology
or Medicine was awarded to Francis
Crick, James Watson and Maurice
Wilkins (the head of the lab in which
Franklin worked). Franklin had
already died, and so was not eligible.
Molecular structure of DNA
DNA Structure
 DNA consists of two molecules that are arranged into a ladder-like
structure called a Double Helix.
 A molecule of DNA is made up of millions of tiny subunits called
Nucleotides.
 Each nucleotide consists of:
1. Phosphate group
2. Pentose sugar
3. Nitrogenous base
Nucleotides
Phosphate
Pentose
Sugar
Nitrogenous
Base
• Nucleotides are linked together by covalent bonds called
phosphodiester linkage
Base
Nucleotides
 The phosphate and sugar form the backbone of the DNA molecule,
whereas the bases form the “rungs”.
 There are four types of nitrogenous bases.
Nucleotides
A
Adenine
T
Thymine
G
Guanine
C
Cytosine
There are two classes of nitrogenous bases:
a. Purines (double-ring, nine-membered structures) include
adenine (A) and guanine (G).
b. Pyrimidines (one-ring, six-membered structures) include
cytosine (C), thymine (T) in DNA and uracil (U) in RNA.
Structures of the nitrogenous bases in DNA and RNA
Nucleotides
 Each base will only bond with one other specific base.
Adenine (A)
Thymine (T)
Cytosine (C)
Guanine (G)
Form a base pair.
Form a base pair.
DNA Structure
 Because of this complementary base pairing, the order of the bases
in one strand determines the order of the bases in the other strand.
Two hydrogen bonds between A:T pairs
Three hydrogen bonds between C: G paired
G
G
A
T
T
A
A
C
T
G
C
A
T
C
DNA Double Helix and Hydrogen Bonding
• Made of two strands of nucleotides that are joined together by
hydrogen bonding
• Hydrogen bonding occurs as a result of complimentary base pairing
• Adenine and thymine pair up
• Cytosine and guanine pair up
• Each pair is connected through hydrogen bonding
• Hydrogen bonding always occurs between one pyrimidine and one purine
• Complimentary base pairing of pyrimidines and purines
DNA Double Helix and Hydrogen Bonding
DNA Double Helix and Hydrogen Bonding
•Adenine always pairs
with thymine because
they form two H bonds
with each other
•Cytosine always pairs
with guanine because
they form three
hydrogen bonds with
each other
DNA Double Helix and Hydrogen Bonding
DNA Double Helix
• The ‘backbones’ of DNA molecules are made of alternating sugar and
phosphates
• The ‘rungs on the ladder’ are made of bases that are hydrogen bonded
to each other
Antiparallel strands
The strands
run opposite
of each
other.
The 5’ end
always has
the
phosphate
attached.
5’ 3’
3’ 5’
Nucleosome structure
•Nucleosome are the basic unit of chromatin
organization
•In eukaryotes DNA is associated with proteins
•(in prokaryotes the DNA is naked)
•Nucleosomes = basic beadlike unit of DNA packing
•Made of a segment of DNA wound around a
protein core that is composed of 2 copies of each
of 4 types of histones
Nucleosome structure
• Nucleosomes have:
• 8 histones in the core
• DNA wrapped twice around the core
• One histone holding the nucleosome
together
• A DNA ‘linker’ continuing towards
the next nucleosome
Nucleosome structure
• The DNA has a negatively charged backbone (because of the
phosphate groups)
• The proteins (the histones) are positively charged
• The DNA and proteins are electromagnetically attracted to each
other to form chromatin
Assignment (in your notebook)
• 1. Draw the structure of ribose and number the carbons
• 2. Draw a schematic representation of a nucleotide. Label the sugar, base and
phosphate.
• 3. What are the complimentary base pairs to a DNA strand that has the
following order A T A C C T G A A T?
• 4. Draw a schematic representation of an unwound DNA double helix using
the base pairs from your answer in question 3.
• Include the number of hydrogen bonds between each base pair. Be sure to label all
of the bases and the 5’ and 3’ ends of the structure.

DNA structure

  • 2.
  • 3.
    The Discovery ofthe DNA Double Helix • James Watson and Francis Crick published the famous double-helix structure in 1953. • Two additional sources of data assisted Watson and Crick with their model: a. Erwin Chargaff’s ratios obtained for DNA derived from a variety of sources showed that the amount of purine always equals the amount of pyrimidine, and further, that the amount of G equals C, and the amount of A equals T. b. Rosalind Franklin’s X ray diffraction images of DNA showed a helical structure with regularities at 0.34 nm and 3.4 nm along the axis of the molecule.
  • 4.
    Watson and Crick’sthree-dimensional model has these main features: a. It is two polynucleotide chains wound around each other in a right-handed helix. b. The two chains are antiparallel. c. The sugar-phosphate backbones are on the outside of the helix, and the bases are on the inside, stacked perpendicularly to the long axis like the steps of a spiral staircase.
  • 6.
    • The 1962Nobel Prize in Physiology or Medicine was awarded to Francis Crick, James Watson and Maurice Wilkins (the head of the lab in which Franklin worked). Franklin had already died, and so was not eligible.
  • 7.
  • 8.
    DNA Structure  DNAconsists of two molecules that are arranged into a ladder-like structure called a Double Helix.  A molecule of DNA is made up of millions of tiny subunits called Nucleotides.  Each nucleotide consists of: 1. Phosphate group 2. Pentose sugar 3. Nitrogenous base
  • 9.
  • 10.
    • Nucleotides arelinked together by covalent bonds called phosphodiester linkage Base
  • 11.
    Nucleotides  The phosphateand sugar form the backbone of the DNA molecule, whereas the bases form the “rungs”.  There are four types of nitrogenous bases.
  • 12.
  • 13.
    There are twoclasses of nitrogenous bases: a. Purines (double-ring, nine-membered structures) include adenine (A) and guanine (G). b. Pyrimidines (one-ring, six-membered structures) include cytosine (C), thymine (T) in DNA and uracil (U) in RNA. Structures of the nitrogenous bases in DNA and RNA
  • 14.
    Nucleotides  Each basewill only bond with one other specific base. Adenine (A) Thymine (T) Cytosine (C) Guanine (G) Form a base pair. Form a base pair.
  • 15.
    DNA Structure  Becauseof this complementary base pairing, the order of the bases in one strand determines the order of the bases in the other strand.
  • 16.
    Two hydrogen bondsbetween A:T pairs Three hydrogen bonds between C: G paired
  • 17.
  • 18.
    DNA Double Helixand Hydrogen Bonding • Made of two strands of nucleotides that are joined together by hydrogen bonding • Hydrogen bonding occurs as a result of complimentary base pairing • Adenine and thymine pair up • Cytosine and guanine pair up • Each pair is connected through hydrogen bonding • Hydrogen bonding always occurs between one pyrimidine and one purine
  • 19.
    • Complimentary basepairing of pyrimidines and purines DNA Double Helix and Hydrogen Bonding
  • 20.
    DNA Double Helixand Hydrogen Bonding
  • 21.
    •Adenine always pairs withthymine because they form two H bonds with each other •Cytosine always pairs with guanine because they form three hydrogen bonds with each other DNA Double Helix and Hydrogen Bonding
  • 22.
    DNA Double Helix •The ‘backbones’ of DNA molecules are made of alternating sugar and phosphates • The ‘rungs on the ladder’ are made of bases that are hydrogen bonded to each other
  • 23.
    Antiparallel strands The strands runopposite of each other. The 5’ end always has the phosphate attached. 5’ 3’ 3’ 5’
  • 25.
    Nucleosome structure •Nucleosome arethe basic unit of chromatin organization •In eukaryotes DNA is associated with proteins •(in prokaryotes the DNA is naked) •Nucleosomes = basic beadlike unit of DNA packing •Made of a segment of DNA wound around a protein core that is composed of 2 copies of each of 4 types of histones
  • 26.
    Nucleosome structure • Nucleosomeshave: • 8 histones in the core • DNA wrapped twice around the core • One histone holding the nucleosome together • A DNA ‘linker’ continuing towards the next nucleosome
  • 27.
    Nucleosome structure • TheDNA has a negatively charged backbone (because of the phosphate groups) • The proteins (the histones) are positively charged • The DNA and proteins are electromagnetically attracted to each other to form chromatin
  • 29.
    Assignment (in yournotebook) • 1. Draw the structure of ribose and number the carbons • 2. Draw a schematic representation of a nucleotide. Label the sugar, base and phosphate. • 3. What are the complimentary base pairs to a DNA strand that has the following order A T A C C T G A A T? • 4. Draw a schematic representation of an unwound DNA double helix using the base pairs from your answer in question 3. • Include the number of hydrogen bonds between each base pair. Be sure to label all of the bases and the 5’ and 3’ ends of the structure.