1
2
3
Crystal Structure
4
Crystal structure of a material is way in
which atoms, ions, molecules are
periodically arranged in 3-D space.
Crystal structure = lattice + motif
A lattice is a 3-D array of points in space.
Every lattice point must have identical surroundings.
Basic unit of Lattice structure is called Unit Cell
5
Unit Cell
The length of the unit cell along the x,
y, and z direction
are defined as a, b, and c.
The angles between the crystallographic
axes are defined by:
= the angle betweenα b and c
= the angle betweenβ a and c
= the angle betweenγ a and b
Unit Cell - Basic structural unit or building block of Lattice
6
Crystal System and Bravais Lattice
7
Crystal Structure - Periodic Table
Now we got the basis of Crystal
structure in 3D. Lets move
toward Planes (2D) or Surface.
8
9
Crystal Plane and Notation
Consider the plane in pink, which is
one of an infinite number of parallel
plane each a consistent distance (“a”)
away from the origin
The plane intersects the x-axis at point
a. It runs parallel along y and z axes.
Thus, this plane can be designated as
(1,∞,∞)
10
Miller Indices are the reciprocals of theMiller Indices are the reciprocals of the
parameters of each crystal faceparameters of each crystal face
Procedure :
•Identify the coordinate intercepts
•Take reciprocals
•Clear fractions
•Cite specific planes in parentheses
Miller Indices
X Y Z
Intercept 1 ∞ ∞
Reciprocal 1/1 1/
∞
1/
∞
Clear 1 0 0
INDICES 1 0 0
11
Miller Indices
12
Advantage of Miller Indices
For cubic crystals, the angle, f between two planes, (h1
k1
l1
) and
(h2
k2
l2
) is given by
13
Stereographic Projection of Crystal Plane
Representing
a plane normal
010
10
0
001
(north)
(south)
Projection of Planes
on to a plane
14
Stereographic Projection
15
Stereographic Projection
16
Stereographic Projection
17
Stereographic Projection
18
Stereographic Projection
19
Stereographic Projection
20
Reciprocal Lattice
In the reciprocal lattice, sets of
parallel (hkl) atomic planes are
represented by a single point
located a distance 1/dhkl from the
lattice origin and is normal to the
planes separating the original
vector.
γ + γ* = 180°
hkl
hkl
d
d
1
=∗
Reciprocal Lattice in 3D
21
Reciprocal Lattice in Plane Projection
(100)
(110)
(111)
22
23
Electromagnetic Spectrum
24
Interference
25
Interference and Geometry
Slits
Interference
Pattern
Square Rectangular Square Oblique
Now If one imagine crystal Lattice instead of slit geometry, its
interference pattern is reciprocal lattice
Basically , Interference pattern is reciprocal of slit geometry
26
X ray Interaction with Matter
PHOTON SCATTERING:
COHERENT
COMPTON
PHOTON DISAPPEARANCE
PHOTOELECTRIC EFFECT
PAIR PRODUCTION
PHOTODISINTEGRATION
27
Diffraction and Bragg’s Law
set of
lattice
planes
d
θ θ
X-rays
d sin θ
To find dhkl , one
can fix λ and
vary θ (PXRD)
or vise versa
(Laue Method)
28
Ewald’s Sphere
Explanation of Ewald’s Sphere using – Animation
http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald.php
29
Ewald’s Sphere
Explanation of Ewald’s Sphere using – Animation
http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald.php
30
Ewald’s Sphere
Explanation of Ewald’s Sphere using – Animation
http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald.php
• http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald
• animation
31
Ewald’s Sphere - Animation
Ewald’s Sphere + Reciprocal Lattice +
Projection = X – ray Diffraction
32
Ewald’s Sphere + Reciprocal Lattice + Projection
Live Demonstration (simulated )
http://phillips-lab.biochem.wisc.edu/software.html
XRayView : A Virtual X-Ray Crystallography Laboratory
33
34
X – Ray Production
35
X – Ray Types
When the target material of the X-ray tube is bombarded with
electrons accelerated from the cathode filament, two types of X-
ray spectra are produced.
Bremsstrahlung X-Rays
The continuous spectra consists
of a range of wavelengths of X-
rays with minimum wavelength
and intensity
36
X – Ray Types
When the target material of the X-ray tube is bombarded with
electrons accelerated from the cathode filament, two types of X-
ray spectra are produced.
Characteristic X-ray Spectra
Characteristic spectra is produced
at high voltage as a result of
specific electronic transitions
that take place within
individual atoms of the target
material.
37
X – Ray Types
When the target material of the X-ray tube is bombarded with
electrons accelerated from the cathode filament, two types of X-
ray spectra are produced.
Characteristic X-ray Spectra
Characteristic spectra is produced
at high voltage as a result of
specific electronic transitions
that take place within
individual atoms of the target
material.
38
X – Ray Types
When the target material of the X-ray tube is bombarded with
electrons accelerated from the cathode filament, two types of X-
ray spectra are produced.
Bremsstrahlung X-Rays
Characteristic spectra is produced
at high voltage as a result of
specific electronic transitions
that take place within
individual atoms of the target
material.
39
X – Ray Tubes
40
Some Diffraction Technique demands
monochromatic X-ray (not Laue
method). K line in the X-ray spectrumβ
needs to be removed.
Mass absorption coefficient
of the β-filter.
Anod
e
 
C
u
  Co   Fe   Cr   Mo
Filter  Ni   Fe   Mn   V   Zr
Filter
41
X ray Detection
Three Principle Types of X ray detection:
Photographic Films
Counters
Florescent Screens and CCDS
Photographic Films
• Film has excellent resolution.
• Inexpensive.
• Very long exposures
Counters:
Counters produce electrical signal from an incident X ray
radiation. Counters are for rigorous studies of intensities with
X –rays.
42
X ray Detectors
Phosphors
A thin phosphor screen converts
the incident x-rays into optical
photons, which the CCD detects.
. 1
Performance Parameter :
Phosphor - Camera Optics - CCD Efficiency and Resolution
Control Electronics - Software
43
Types of X-ray Diffraction
44
Acklowdegement
& Our Research Group

Crystallography and X ray Diffraction - Quick Overview

  • 1.
  • 2.
  • 3.
  • 4.
    Crystal Structure 4 Crystal structureof a material is way in which atoms, ions, molecules are periodically arranged in 3-D space. Crystal structure = lattice + motif A lattice is a 3-D array of points in space. Every lattice point must have identical surroundings. Basic unit of Lattice structure is called Unit Cell
  • 5.
    5 Unit Cell The lengthof the unit cell along the x, y, and z direction are defined as a, b, and c. The angles between the crystallographic axes are defined by: = the angle betweenα b and c = the angle betweenβ a and c = the angle betweenγ a and b Unit Cell - Basic structural unit or building block of Lattice
  • 6.
    6 Crystal System andBravais Lattice
  • 7.
    7 Crystal Structure -Periodic Table
  • 8.
    Now we gotthe basis of Crystal structure in 3D. Lets move toward Planes (2D) or Surface. 8
  • 9.
    9 Crystal Plane andNotation Consider the plane in pink, which is one of an infinite number of parallel plane each a consistent distance (“a”) away from the origin The plane intersects the x-axis at point a. It runs parallel along y and z axes. Thus, this plane can be designated as (1,∞,∞)
  • 10.
    10 Miller Indices arethe reciprocals of theMiller Indices are the reciprocals of the parameters of each crystal faceparameters of each crystal face Procedure : •Identify the coordinate intercepts •Take reciprocals •Clear fractions •Cite specific planes in parentheses Miller Indices X Y Z Intercept 1 ∞ ∞ Reciprocal 1/1 1/ ∞ 1/ ∞ Clear 1 0 0 INDICES 1 0 0
  • 11.
  • 12.
    12 Advantage of MillerIndices For cubic crystals, the angle, f between two planes, (h1 k1 l1 ) and (h2 k2 l2 ) is given by
  • 13.
    13 Stereographic Projection ofCrystal Plane Representing a plane normal 010 10 0 001 (north) (south) Projection of Planes on to a plane
  • 14.
  • 15.
  • 16.
  • 17.
  • 18.
  • 19.
  • 20.
    20 Reciprocal Lattice In thereciprocal lattice, sets of parallel (hkl) atomic planes are represented by a single point located a distance 1/dhkl from the lattice origin and is normal to the planes separating the original vector. γ + γ* = 180° hkl hkl d d 1 =∗
  • 21.
    Reciprocal Lattice in3D 21 Reciprocal Lattice in Plane Projection (100) (110) (111)
  • 22.
  • 23.
  • 24.
  • 25.
    25 Interference and Geometry Slits Interference Pattern SquareRectangular Square Oblique Now If one imagine crystal Lattice instead of slit geometry, its interference pattern is reciprocal lattice Basically , Interference pattern is reciprocal of slit geometry
  • 26.
    26 X ray Interactionwith Matter PHOTON SCATTERING: COHERENT COMPTON PHOTON DISAPPEARANCE PHOTOELECTRIC EFFECT PAIR PRODUCTION PHOTODISINTEGRATION
  • 27.
    27 Diffraction and Bragg’sLaw set of lattice planes d θ θ X-rays d sin θ To find dhkl , one can fix λ and vary θ (PXRD) or vise versa (Laue Method)
  • 28.
    28 Ewald’s Sphere Explanation ofEwald’s Sphere using – Animation http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald.php
  • 29.
    29 Ewald’s Sphere Explanation ofEwald’s Sphere using – Animation http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald.php
  • 30.
    30 Ewald’s Sphere Explanation ofEwald’s Sphere using – Animation http://www.doitpoms.ac.uk/tlplib/reciprocal_lattice/ewald.php
  • 31.
  • 32.
    Ewald’s Sphere +Reciprocal Lattice + Projection = X – ray Diffraction 32 Ewald’s Sphere + Reciprocal Lattice + Projection Live Demonstration (simulated ) http://phillips-lab.biochem.wisc.edu/software.html XRayView : A Virtual X-Ray Crystallography Laboratory
  • 33.
  • 34.
    34 X – RayProduction
  • 35.
    35 X – RayTypes When the target material of the X-ray tube is bombarded with electrons accelerated from the cathode filament, two types of X- ray spectra are produced. Bremsstrahlung X-Rays The continuous spectra consists of a range of wavelengths of X- rays with minimum wavelength and intensity
  • 36.
    36 X – RayTypes When the target material of the X-ray tube is bombarded with electrons accelerated from the cathode filament, two types of X- ray spectra are produced. Characteristic X-ray Spectra Characteristic spectra is produced at high voltage as a result of specific electronic transitions that take place within individual atoms of the target material.
  • 37.
    37 X – RayTypes When the target material of the X-ray tube is bombarded with electrons accelerated from the cathode filament, two types of X- ray spectra are produced. Characteristic X-ray Spectra Characteristic spectra is produced at high voltage as a result of specific electronic transitions that take place within individual atoms of the target material.
  • 38.
    38 X – RayTypes When the target material of the X-ray tube is bombarded with electrons accelerated from the cathode filament, two types of X- ray spectra are produced. Bremsstrahlung X-Rays Characteristic spectra is produced at high voltage as a result of specific electronic transitions that take place within individual atoms of the target material.
  • 39.
  • 40.
    40 Some Diffraction Techniquedemands monochromatic X-ray (not Laue method). K line in the X-ray spectrumβ needs to be removed. Mass absorption coefficient of the β-filter. Anod e   C u   Co   Fe   Cr   Mo Filter  Ni   Fe   Mn   V   Zr Filter
  • 41.
    41 X ray Detection ThreePrinciple Types of X ray detection: Photographic Films Counters Florescent Screens and CCDS Photographic Films • Film has excellent resolution. • Inexpensive. • Very long exposures
  • 42.
    Counters: Counters produce electricalsignal from an incident X ray radiation. Counters are for rigorous studies of intensities with X –rays. 42 X ray Detectors Phosphors A thin phosphor screen converts the incident x-rays into optical photons, which the CCD detects. . 1 Performance Parameter : Phosphor - Camera Optics - CCD Efficiency and Resolution Control Electronics - Software
  • 43.
    43 Types of X-rayDiffraction
  • 44.

Editor's Notes

  • #5 Basis vector Lattice vector Lattice point What is primitive lattice ?
  • #10 Intercept Talk about transformation Why transformation is required ? Geometrical transformation
  • #13 Equivalent direction
  • #21 Mention that, one has to think in abstract.