ara operon
presentation
Dr. P. Suganya
Assistant Professor
Department of Biotechnology
Sri Kaliswari college (autonomous), sivakasi
operon
FRANCIS JACOB And JACQUES MONAD 1961
Explained that gene regulation is by operon model
2
“
The Operon Consist of regulatory gene structural
gene operator and promoter site This 3 basic DNA
components
3
3 BASIC DNA COMPONENTS
▸ Structural genes – The genes that ara co-regulated
by the operon
▸ Operator –A segment of DNA to which a repressor
binds
 Promoter – A Nucleotide sequence that enables a
gene to be transcribed
4
Ara Operon
The L-arabinose operon , also called ara operon ,is a
gene sequence encoding enzymes needed for tha
catabolism of arabinose to xylulose 5- phosphate ,an
intermediate of the pentose phosphate pathway. It
has both positive and negative regulation . The
genes araBAD and araC,are transcribed in opposite
directions
5
Structure of ara operon
6
“
arabinose as a corbon source by converting it into
Xylulose-5- phosphate an intermediate in the
pentose phosphate pathway. The ara operon
codes for 3 enzymes .that are required to catalyze
the metabolism of arabinose encoded by 3 genes
araB,araA ,ara D.It is called ara BAD
7
Structural genes
Control or regulatory genes
 The three structural genes in an operon is
regulated by the ara C gene product .
 The ara C gene is present near by operator gene
and transcribed from its own promoter which is
nearby ara O1 .
 The ara c is transcribed in opposite derection to
ara BAD gene the ara c produces repressor
molecules .
 Ara operon consists of two regulatory operator
site ,ara O1 and ara O2 .
8
Mechanism of regulation of ara-operon
 The regulatory protein ara c ,encoded by ara c gene
mediates both possitive and negative control.
 Binding of a singnal molecule to the ara c protein
alters the conformational change from the repressor
form to an activator form.
 The ara c repressor protein regulates its own
synthesis ,by binding at ara O1.the ara c represses
its own transcription .
9
Negative regulation
 Arabinose livels ara low and glucose levels are
high,ara c protein binds to the both ara I and ara O2
and these sites together to form a DNA loop of
about 210 base paris.
 The arabinose operon is switched off.
 These events block the access of RNA polymerase to
the PBAD promoter( which is a very weak promoter)
10
Negative regulation structure
11
Positive regulation
 The arabinose concentration is high or when
glucose concentration is very low ara c protein binds
to the arabinose ,changing its conformation leading
to the binding of ara c reprossor protein to the ara
O1 and ara I
 The DNA loop is opened and the transcription of
structural genes ara BAD mRNA synthesis enzymes
to metabolise arabinose
 The arabionse operon is switched on
12
Structure of positive regulation
13
Thank you

Ara operon

  • 1.
    ara operon presentation Dr. P.Suganya Assistant Professor Department of Biotechnology Sri Kaliswari college (autonomous), sivakasi
  • 2.
    operon FRANCIS JACOB AndJACQUES MONAD 1961 Explained that gene regulation is by operon model 2
  • 3.
    “ The Operon Consistof regulatory gene structural gene operator and promoter site This 3 basic DNA components 3
  • 4.
    3 BASIC DNACOMPONENTS ▸ Structural genes – The genes that ara co-regulated by the operon ▸ Operator –A segment of DNA to which a repressor binds  Promoter – A Nucleotide sequence that enables a gene to be transcribed 4
  • 5.
    Ara Operon The L-arabinoseoperon , also called ara operon ,is a gene sequence encoding enzymes needed for tha catabolism of arabinose to xylulose 5- phosphate ,an intermediate of the pentose phosphate pathway. It has both positive and negative regulation . The genes araBAD and araC,are transcribed in opposite directions 5
  • 6.
  • 7.
    “ arabinose as acorbon source by converting it into Xylulose-5- phosphate an intermediate in the pentose phosphate pathway. The ara operon codes for 3 enzymes .that are required to catalyze the metabolism of arabinose encoded by 3 genes araB,araA ,ara D.It is called ara BAD 7 Structural genes
  • 8.
    Control or regulatorygenes  The three structural genes in an operon is regulated by the ara C gene product .  The ara C gene is present near by operator gene and transcribed from its own promoter which is nearby ara O1 .  The ara c is transcribed in opposite derection to ara BAD gene the ara c produces repressor molecules .  Ara operon consists of two regulatory operator site ,ara O1 and ara O2 . 8
  • 9.
    Mechanism of regulationof ara-operon  The regulatory protein ara c ,encoded by ara c gene mediates both possitive and negative control.  Binding of a singnal molecule to the ara c protein alters the conformational change from the repressor form to an activator form.  The ara c repressor protein regulates its own synthesis ,by binding at ara O1.the ara c represses its own transcription . 9
  • 10.
    Negative regulation  Arabinoselivels ara low and glucose levels are high,ara c protein binds to the both ara I and ara O2 and these sites together to form a DNA loop of about 210 base paris.  The arabinose operon is switched off.  These events block the access of RNA polymerase to the PBAD promoter( which is a very weak promoter) 10
  • 11.
  • 12.
    Positive regulation  Thearabinose concentration is high or when glucose concentration is very low ara c protein binds to the arabinose ,changing its conformation leading to the binding of ara c reprossor protein to the ara O1 and ara I  The DNA loop is opened and the transcription of structural genes ara BAD mRNA synthesis enzymes to metabolise arabinose  The arabionse operon is switched on 12
  • 13.
    Structure of positiveregulation 13
  • 14.