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IRJET-Optic Disc and Fovea Localization with GUI in Retinal Fundus Images
1.
International Research Journal
of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 05 Issue: 06 | June 2018 www.irjet.net p-ISSN: 2395-0072 © 2018, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 2760 Optic Disc and Fovea Localization with GUI In Retinal Fundus Images Priyanka Kale1, Kamble Vijay2, Navinkumar Patle3 1BTech (EXTC) SGGSIE&T, NANDED 2BTech (IT) SGGSIE&T, NANDED 3BTech (INSTR) GCOE, JALGAON ---------------------------------------------------------------------***--------------------------------------------------------------------- Abstract – Detection of Diabetic Retinopathy(DR) is extensively done using retinal fundus images. The localization of normal anatomic components like optic disc and fovea in retinal fundus images is necessary step for automatic diagnosis of it. A computer screening of DR provides an immediate detection of Diabetic Retinopathy. In this paper an automated method for localization of optic disc and fovea is proposed. Optic disc is localized using 2D convolutionofimage in different dimension and creating a mask by adjusting brightness of retinal fundus image. And fovea is detected by taking mean of green channel and using gauss filter. For making it automatic, Graphical User Interface (GUI) is used. Key Words: Diabetic Retinopathy, Optic Disc, Fovea, Retinal Images, Fundus Images, Gaussian Filter, etc. 1.INTRODUCTION The human eye is an organ of visual system which provides sense of light incoming into eye. Eyes help us visualise and understand dimensions, shapes, etc. of known Universe. Retina is the core part of eye that includessensory neurons that respond to incoming light. It convert incoming light signal into electrical signals. The ability of thepersonto see clearly is termed as visual acuity. If visual acuity of a person diminishes then eye disorders like diabetic retinopathy can occur. Diabetic Retinopathy occurs due to Diabetic mellitus, which is caused by inability of body to produce or properly use insulin which leads to high sugar level. For automated analysis of retinal images localization of normal anatomy like optic disc and fovea is important step. Abnormalities associated with eye disease arenotuniformly spread therefore knowledge of the localization of abnormalities in the retina is important while computerized analysis of retinal images. The Fovea and Optic Disc are the main landmark in the retinal images. In this paper we develop a technique for automatic localization of these landmark. Fig 1 shows the retinal fundus image with the optic disc , macula and fovea. 1.1 Optic Disc The optic disc is the bright yellowish spot on the retina of eye from which the optic nerves begins and the axons ofretinalganglion cellscome together. Opticdiscisthe point where the nervous and blood system enter the retina. In optic disc there are no rods or cones. . Around 1–1.2 million nerve fibers are carried from optic disc to brain. The optic disc is oval shaped, it hasdimensionof around 1.76mm horizontally and1.92mm vertically. Opticdiscisplaced2to4 mm beside fovea. Fig: 1 1.2 Fovea A small hole with closely bundled cone cellsformFovea.It is centrally placed inside of macula. It helps in vision by making it easier to visualise sharp and central vision, which is necessary in humans to control activities in which visual detail is very important such as reading. Macula islocated at center of retina and is of diameter around 2.5 to 3mm . The center of fovea isof diameter 0.3mm. The fovea isa tiny rod- free region and there is no blood vessels. It is made up of cones as tightly packed as physically possible. 2. RELATED WORKS Sekhar, Al-Nuaimy and Nandi presentanautomated localization of optic disc and Fovea. They have used the mathematical morphology for the analysis shapesin images and combined RGB(Red, Green, Blue) value of the images as it showsgood variations between opticdiscandbackground.
2.
International Research Journal
of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 05 Issue: 06 | June 2018 www.irjet.net p-ISSN: 2395-0072 © 2018, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 2761 This methodology worksonly when there are no exudatesin the background. Their technique included Hough transform for boundary and center. Fovea is detected by exploring the macula region by determining intensity variation [1]. Other approaches include featuresof retinalvasculatureand itsspatial relation with the OD to localise OD [2]. For theGUI other approaches which were used for hard exudate detection are used [3]. Few more methods for localisation and segmentation of OD are proposed by extracting ROI and using Hough transform [4], another method proposed kNN classifier [5]. 3. METHODOLOGY Chart -1: System Flowchart The Flowchart in chart1 showstheproposesystemworkflow step by step. In IDRiD Sub-Challenge 3, the image size of fundus photographs is 4288*2848, and we reduce them to a lower resolution of 256*256 due to limited computational resource. Fovea is one of the most fundamental structures of retina, and this is located in the center of the macula. In the fundus image, The darkest part of approximated circle is fovea. Therefore,to extractthe fovea region,we have applied preprocessing such as RGB to Grey, dataset normalization, and contrast enhancement. The GUI system we have developed contains first step as select image, from which we can select image from differentdifferentlocations. After selecting image wehaveto preprocess the image for that we have applied RGB to grey, dataset normalization, and contrast enhancement. In preprocessingwe are removingunnecessaryblurringandthe noise stuff of things that makes image unclear. By image preprocessing we get the clear image of retina. Fig:2 Optic Disc Detection Algorithm The strel function createsa disk-shaped structuring element, where wehave to specifytheradiusandthenumber of line structuring elemensts those are used to approximate the disk shape. Morphological operations using disk approximations run much faster when the structuring element uses approximations. The imerode function erodesthebinary,grayscaleor packed binary image, and the eroded image is returned. The result of the function is the structuring element object or array of structuring element objects.. The edge function returns the classification edgefor the object with dataof uint8(im) and classification‘canny’.By this we are getting the mask. And subtract image g and p. g = rgb2gray(image); mask = sqrt((x-C).^2 + (y-R).^2) <= radius; p=im2uint8(mask); result = imsubtract(g, p) the resultant optic disc image is in result. For Fovea detection we are separately developed another algorithm. In which we are using green plane of the preprocessed image. And finding out the mean of green planed image forgettingthe vector pointsthose are lessthan mean found that are required for cropping the centroid region from image. Here we are setting the sigma values as follows for applying the filter: sigma_s = 40; sigma_r = 0.15;
3.
International Research Journal
of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 05 Issue: 06 | June 2018 www.irjet.net p-ISSN: 2395-0072 © 2018, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 2762 Fig -1: Screening for optic disc and fovea. gg = filter(fg, sigma_s, sigma_r); detail_amplification = 10; detailsg = fg - gg; enhanced_fg = fg + detailsg*detail_amplification; J12=im2uint8(enhanced_fg); h = fspecial('gaussian'); J = imadjust(J12); The filtered image is used to get the fovea image as we have to subtract the gg from fg. The resultant image is enhanced by enhanced_fg = fg + detailsg*detail_amplification;. The Guassian filter is used here returns a Gaussian lowpass filter of size h which is rotationally symmetric with standard deviation positive sigma. The origin, which is center pixel of structuring element, identifies the pixel in the image being processed. Flat structuring elements are created by strel function. afterOpening = logical(afterOpening); fovea_image = zeros(m,n); The logical function converts afterOpening image into an arrayof logical values. A nonzero element of after Openingis converted to logical 1 (true) and zeros are transferred to logical 0 (false). Complex values and NaNs cannot be converted to logical values and result in a conversion error. The function getLargestComponet will return the largest connected component and this is done redundantly in a loop and stored in xout image. And from this xout image we are detecting the fovea. And here we get the fovea. 3. CONCLUSIONS In this paper, the image captured from the fundus camera is used for localizationof optic disc and fovea with thehelpofa graphic user interface. The localization techniques specified in this paper have success even when the exudates are present in the image. This gives us edge over previous techniques [1]. In addition, this paper presentsaGUIforeasy manipulation and representation of technique. ACKNOWLEDGEMENT We would like to acknowledge the immense support of our Professor Dr. M.B. Kokare without whom it wasnot possible to write the paper. Their guidance formed the base of the paper and their expertise comments greatly enhanced the manuscript. Besides, we would liketo thankMr.RaviKamble Research Scholar at Center of Excellence for his guidance, availability and motivation for the paper. Our Sincere thanksalso goesto Mrs. SushmaKulkarniforher immense support. Last but not the least we would like to thank SGGSIE&T, Nanded for providing us the infrastructure for the completion of paper. REFERENCES [1] Sekhar, Al-Nuamey, Nandi, ‘Automated Localisation of optic disk and fovea in retinal fundus Image’. 16th European Signal Processing Conference (EUSIPCO 2008). [2] Jaffar, Nandi and Al-Nuamey, ’Automatic Localisation of Optic Disc and Fovea to assist Diabetic Retinopathy Screenings’. EUSPICO 2013 1569735225. [3] Prof. B. Venkatlaxmi, V. Saravanam, G. Jenny Nivedita, ‘Graphic User Interface for Enhanced Retinal Image Analysis for Diagnosing Diabetic Retinopathy’.978-1- 61284-486-2/111 ©2011 IEEE. [4] Desai, Garg, Yadav, Sivaswamy, ‘Automated localisation and segmentation of optic disc and fovea from retinal Images’. [5] M. Niemeijer, M.D. Abràmoff and B. van Ginneken. "Fast detection of the optic disc and fovea in color fundus photographs", Medical Image Analysis2009;13(6):859- 870. [6] CP Wilkinson, Frederick L Ferris, Ronald E Klein, Paul P Lee, Carl David Agardh, Matthew Davis, Diana Dills, Anslem Kampik, R Pararajasegaram, and Juan T Verdaguer, ‘Proposed international clinical diabetic retinopathy and diabetic macular edema disease severity,’ Ophthalmology, vol. 110, no. 9,pp.1677-1682, 2003 [7] T. Walter, J. C. Klein, P. Massin, and A. Erginay, "A contribution of image processing to the diagnosis of diabetic retinopathy--detection of exudates in color fundus images of the human retina," IEEE Trans Med Imaging, vol. 21, pp. 1236-43, 2002.
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