maintenance and transport of cultures
maintenance of cultures
agar slant culture
paraffin method
storage in saline suspension
preservation in sterile soil
preservation by drying in vaccum
cryopreservation
lyophilization
transport media
Preservation of industrially important microorganisms, methods of preservation, periodic transfer, storage in saline suspension, storage in sterile soil, cryopreservation
Secondary screening of industrial important microbes DhruviSuvagiya
Detection and isolation of a microorganism from a natural environment like soil containing large number of microbial population is called as screening. It is very time consuming and expensive process.
Microbial Kinetics in Batch Culture
Culture system containing a limited amount of nutrient, which is inoculated with the microorganism. Cells grow until some component is exhausted or until the environment changes so as to inhibit growth. Biomass concentration defined in terms of cell dry weight measurements (g/l) or total cell number (cells/ml).
Lineweaver-Burke Equation.....We remember the Monod Equation
Invert…
The equation now has the form of a straight line with intercept.
Y = MX + C
By plotting as a function of
You get a straight line, where the slope is , and the y–axis intercept is .
Product Yield Coefficient
Maintenance:
Cells use energy and raw materials for two functions, production of new cells and the maintenance of existing cells. In general, consumption of materials for maintenance is small w.r.t. the amount of materials used in the synthesis of new biomass.
Generally it is assumed that the use of materials for maintenance is proportional to the amount of cells present.
Preservation of industrially important microorganisms, methods of preservation, periodic transfer, storage in saline suspension, storage in sterile soil, cryopreservation
Secondary screening of industrial important microbes DhruviSuvagiya
Detection and isolation of a microorganism from a natural environment like soil containing large number of microbial population is called as screening. It is very time consuming and expensive process.
Microbial Kinetics in Batch Culture
Culture system containing a limited amount of nutrient, which is inoculated with the microorganism. Cells grow until some component is exhausted or until the environment changes so as to inhibit growth. Biomass concentration defined in terms of cell dry weight measurements (g/l) or total cell number (cells/ml).
Lineweaver-Burke Equation.....We remember the Monod Equation
Invert…
The equation now has the form of a straight line with intercept.
Y = MX + C
By plotting as a function of
You get a straight line, where the slope is , and the y–axis intercept is .
Product Yield Coefficient
Maintenance:
Cells use energy and raw materials for two functions, production of new cells and the maintenance of existing cells. In general, consumption of materials for maintenance is small w.r.t. the amount of materials used in the synthesis of new biomass.
Generally it is assumed that the use of materials for maintenance is proportional to the amount of cells present.
Fermentation
Scale up of fermentation
Steps in scale up
Scale up fermentation process
Optimizing scale up of fermentation process
Rules followed while doing scale up
Studies carried out during scale up
Reference
vaccine is a biological preparation that provides active acquired immunity to a particular disease. A vaccine typically contains an agent that resembles a disease-causing microorganism and is often made from weakened or killed forms of the microbe, its toxins, or one of its surface proteins. The agent stimulates the body's immune system to recognize the agent as a threat, destroy it, and to further recognize and destroy any of the microorganisms associated with that agent that it may encounter in the future.
HISTORY OF VACCINES-
EDWARD JENNER conduct experiments in 1796 that lead to the creation of the first smallpox vaccine for prevention of smallpox.
A vaccine for RABIES is developed by LOUIS PASTEUR .
Vaccine for COLERA and TYPHOID were developed in 1896 and PLAGE vaccine in 1887.
The first DIPHTHERIA vaccine is developed in about 1913 by EMIL ADOLPH BEHRING,WILLIAM HALLOCK PARK.
The whole cell PERTUSIS vaccines are developed in 1914.
A TETANUS vaccine is developed in 1927.
Introduction
Primary Culture
Steps In Primary Culture
Isolation Of Tissue
Dissection And/Or Disaggregation
Types Of Primary Culture
Primary Explant Culture
Enzymatic Disaggregation
Mechanical Disaggregation
Cell Line( Finite & Continuous)
Naming A Cell Line
Choosing A Cell Line
Maintenance Of Cell Line
Conclusion
reference
Fermentation
Scale up of fermentation
Steps in scale up
Scale up fermentation process
Optimizing scale up of fermentation process
Rules followed while doing scale up
Studies carried out during scale up
Reference
vaccine is a biological preparation that provides active acquired immunity to a particular disease. A vaccine typically contains an agent that resembles a disease-causing microorganism and is often made from weakened or killed forms of the microbe, its toxins, or one of its surface proteins. The agent stimulates the body's immune system to recognize the agent as a threat, destroy it, and to further recognize and destroy any of the microorganisms associated with that agent that it may encounter in the future.
HISTORY OF VACCINES-
EDWARD JENNER conduct experiments in 1796 that lead to the creation of the first smallpox vaccine for prevention of smallpox.
A vaccine for RABIES is developed by LOUIS PASTEUR .
Vaccine for COLERA and TYPHOID were developed in 1896 and PLAGE vaccine in 1887.
The first DIPHTHERIA vaccine is developed in about 1913 by EMIL ADOLPH BEHRING,WILLIAM HALLOCK PARK.
The whole cell PERTUSIS vaccines are developed in 1914.
A TETANUS vaccine is developed in 1927.
Introduction
Primary Culture
Steps In Primary Culture
Isolation Of Tissue
Dissection And/Or Disaggregation
Types Of Primary Culture
Primary Explant Culture
Enzymatic Disaggregation
Mechanical Disaggregation
Cell Line( Finite & Continuous)
Naming A Cell Line
Choosing A Cell Line
Maintenance Of Cell Line
Conclusion
reference
Pure culture preservation of microbes are described in detain. Different short and long term preservation are explained in detail. Methods like Agar slant cultures (Sub culturing) & Refrigeration , Mineral Oil or Liquid Paraffin Method,Saline suspension storage, Drying in Vacuum, Storage at low temperatures (Cryopreservation) and Lyophilization (Freeze drying) are included.
According to Lokesh, the goal of pure culture preservation is to preserve genetic stability and microbiological viability by use of several methods. Important techniques include the straightforward and inexpensive short-term storage of refrigeration at 4°C on agar slants; the long-term preservation of deep freezing at -70°C to -80°C with cryoprotectants like glycerol or DMSO, which guarantees little genetic changes over years; and the freeze-drying process, or lyophilization, in which cultures are frozen and dehydrated under a vacuum to preserve viability and stability over long periods of time. Research, clinical diagnostics, and industrial applications all depend on these techniques to guarantee the availability of clean microbial cultures when required.
Originally isolated from nature, but increasingly "improved" by genetic manipulation via mutagenesis and selection or recombinant DNA technology or protoplast fusion (fungi)
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Remote Sensing and Computational, Evolutionary, Supercomputing, and Intellige...University of Maribor
Slides from talk:
Aleš Zamuda: Remote Sensing and Computational, Evolutionary, Supercomputing, and Intelligent Systems.
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Inter-Society Networking Panel GRSS/MTT-S/CIS Panel Session: Promoting Connection and Cooperation
https://www.etran.rs/2024/en/home-english/
Toxic effects of heavy metals : Lead and Arsenicsanjana502982
Heavy metals are naturally occuring metallic chemical elements that have relatively high density, and are toxic at even low concentrations. All toxic metals are termed as heavy metals irrespective of their atomic mass and density, eg. arsenic, lead, mercury, cadmium, thallium, chromium, etc.
DERIVATION OF MODIFIED BERNOULLI EQUATION WITH VISCOUS EFFECTS AND TERMINAL V...Wasswaderrick3
In this book, we use conservation of energy techniques on a fluid element to derive the Modified Bernoulli equation of flow with viscous or friction effects. We derive the general equation of flow/ velocity and then from this we derive the Pouiselle flow equation, the transition flow equation and the turbulent flow equation. In the situations where there are no viscous effects , the equation reduces to the Bernoulli equation. From experimental results, we are able to include other terms in the Bernoulli equation. We also look at cases where pressure gradients exist. We use the Modified Bernoulli equation to derive equations of flow rate for pipes of different cross sectional areas connected together. We also extend our techniques of energy conservation to a sphere falling in a viscous medium under the effect of gravity. We demonstrate Stokes equation of terminal velocity and turbulent flow equation. We look at a way of calculating the time taken for a body to fall in a viscous medium. We also look at the general equation of terminal velocity.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
2. WHY MAINTENANCE OF CULTURES
NEEDED?
To isolate bacteria in pure cultures.
To demonstrate their properties.
To obtain sufficient growth for the preparation of antigens.
To determine sensitivity to antibiotics.
To estimate viable counts.
Maintain stock cultures.
4. Agar Slant Culture
Agar slants or stabs- prepared after
autoclaving the medium.
placing them on slightly inclined positions-
preparing slants- allow to soldify.
Organism taken from master culture.
Inoculated with individual culture and
incubated for 24 hours.
Stored at refrigerator(5°C) or freezer (-20°C).
Cultures are periodically sub- cultured at an
interval of one to six months.
Time interval varies with the organisms and
the condition of growth.
5. Paraffin Method/ Preservation by Overlaying
Cultures with Mineral Oil
Simple, most economical method.
Agar slants are inoculated &
incubated.
Then, covered with sterile mineral oil
to a depth of 1cm above the tip of
slant surface.
Transfers are made by removing a
loop full of growth- touching the tip to
the glass surface to drain off excess
oil- inoculating a fresh medium-
preserving the initial stock culture.
Functions- providing an aerobic
condition, prevents the dehydration of
the medium and decreases the
metabolic rate of the organisms.
6. Storage in Saline Suspension
Bacteria- salts for various
metabolic activities.
But at high concentration, salts act
as bacteriostatic (temporary growth
inhibitor).
Bacterial culture is preserved in
1% salt concentration in screw-
caped tubes to prevent
evaporation.
The tubes are stored in room
temperatures.
Whenever needed the transfer is
made on agar slant.
7. Preservation in Sterile Soil
used in preservation of cultures that form spores.
Prepared by mixing sand and soil- adding small amount of calcium
carbonate- mixture is transferred to screw capped tubes or tubes
plugged with cotton.
Tubes are then autoclaved- thick suspension of spores is added.
Moisture is removed by quickly placing the cap and maintaining
reduced pressure over a drying agent.
8. Preservation by drying in Vacuum
The cultures are dried over
CaCl2 in a vacuum, then stored
in a refrigerator.
At such conditions, the
organisms survive for longer
period than the air dried
cultures.
9. Cryopreservation
Freezing in liquid nitrogen at -
196°C or in the gas phase above
the liquid nitrogen at -150°C.
In the presence of stabilizing
agents such as glycerol or
dimethyl sulfoxide (DMSO)-
prevent cell damage and promote
cell survival.
Successful with many species that
cannot preserved by lyophilisation.
Most species can be remain viable
under these conditions for 10 to 30
years without undergoing change
in their characteristics.
Method is expensive.
10. Lyophilisation or Freeze- drying
Process where water and other
solvents are removed from a
frozen product via sublimation.
The cells in the gas ampoules are
added to the protective agent such
as bovine serum and rapidly
frozen at low temperatures- dried
in high vaccum- ampoules sealed-
stored at low temperatures.
Most frequently used technique by
culture collection centers.
Many of the bacterial culture is
preserved by this method have
remained viable and unchanged
their characteristics for more than
30 years.
11. Advantages of Lyophilisation
Only minimal storage space is required.
Small vials can be sent conveniently to other microbiological
laboratories when packaged in a special sealed containers.
Lyophilized cultures can be revived by opening the vials, adding liquid
medium, and transfering the rehydrated culture to a suitable growth
medium.
12. Byophilisation
The microbial suspension is placed in small vials.
A thin film is frozen over inside surface of the vial by rotating it in a
mixture of dry ice(solid carbon dioxide), alcohol,or acetone at
temperature of-78°C.
Immediately connected to a high vaccum- this dries the organism
while still frozen- ampoules are sealed off.
Cultures can be stored for several years at -40°C.
To revive microbial cultures, add suitable medium, and after
incubation make further transfers.
Also for preservation of toxins, enzymes, sera and other biological
material.
Permits the maintenance of cultures without altering the
characteristics and greatly reduces the danger of contamination.
13. TRANSPORT MEDIA
Media used for transporting the
samples.
Special media formulated to preserve a
specimen and minimize bacterial
overgrowth from time of collection to the
time it is received at the laboratory to be
proceed.
Delicate organisms may not survive the
time taken for transporting the specimen
to the lab or may be overgrown by non-
pathogens.
Transport media may vary, depending
on the type of organisms in the sample.
Classification;
on the basis of physical state- semi-
solid & liquid
on the basis of their utility- bacterial
media & viral media.
14. Some important criteria for a Transport
Media
Transport media should fulfil the following criteria:
Temporary storage of specimens being transported to the laboratory
for cultivation.
Maintain the viability of all organisms in the specimen without altering
their characteristics.
Contains only buffers and salt.
Lack of nitrogen, carbon, and organic growth factors so as to prevent
microbial multiplication.
Transport media used in the isolation of anaerobes must be free of
molecular oxygen.
15. What are the commonly used Transport
mediums?
For BACTERIA
CARY & BLAIR MEDIA
Semi- solid, white colored.
Used for Shigella, Salmonella, Vibrio and Campylobacter (usually
Gram- neagtive facultative organisms).
Containing thioglycolate, phosphate and NaCl.
Medium supplemented with CaCl2, sodium bisulfite and resazurin for
culture of anaerobes.
16.
17. STUART’S MEDIUM
Non- nutrient soft agar gel containing a reducing agent to
prevent oxidation.(sodium thioglycolate)
Used for transporting specimens suspected of having
gonococci.
Also, used for transporting throat, vaginal, wound and skin
swabs that may contain fastidious organisms.
18.
19. AMIES MEDIUM WITH CHARCOAL
Useful in the isolation of fastidious organisms.
Some other pathogens like Campylobacter can also survive in this
medium.
Charcoal helps eliminate metabolic products of bacterial growth.
20. VENKATARAMAN RAMAKISHNAN (VR)
MEDIUM
Used to transport faeces from suspected cholera
patients.
SACH’S BUFFERED GLYCEROL
SALINE
used to transport faces from patients suspected to be suffering from
bacillus dysentery.
21. VIRAL TRANSPORT MEDIUM
Ideal for diagnosis of viral infection.
Ocular, respiratory and tissue swabs can be submitted.
Fluid samples such as tracheal wash specimens or peritoneal fluid
submitted as is in sterile vials with several drops of saline added, to
prevent desiccation.
Special media only used for viruses.
22.
23. ANAEROBIC TRANSPORT MEDIUM
Mineral salt base semi-solid media with reducing agents such as
sodium thioglycolate and cysteine.
Designed as a holding medium for maintaining viability of anaerobic
bacteria.
Resazurin may also be added as a redox indicator to reveal exposure
to oxygen by turning pink.
Maintains viability of most microorganisms without significant
multiplication and allows for dilution of inhibitors present in clinical
material.
eg: thioglycolate broth.