The urea cycle is a series of biochemical reactions that occur primarily in the liver to convert excess ammonia into urea for excretion. The cycle involves the condensation of ammonia with carbon dioxide to form carbamoyl phosphate, followed by a series of reactions to add the carbamoyl group to various nitrogen-containing compounds to eventually form urea. Urea is then transported to the kidneys and excreted in urine to remove toxic ammonia from the body. The cycle requires energy in the form of ATP and occurs through five enzyme-catalyzed steps to synthesize urea from ammonia and carbon dioxide.
Metabolism of amino acids (general metabolism)Ashok Katta
Metabolism of amino acids (general metabolism).
Part - I of amino acid metabolism.
This presentation covers Transamination, deamination, formation and Transport of Ammoniaand etc.
Metabolism of amino acids (general metabolism)Ashok Katta
Metabolism of amino acids (general metabolism).
Part - I of amino acid metabolism.
This presentation covers Transamination, deamination, formation and Transport of Ammoniaand etc.
explains the palmitate synthesis- which is most common FA stored in Adipose tissue , elongation system and Desaturation system, compares oxidation with synthesis.
Protein metabolism is more appropriately learnt as metabolism of Amino acid. The proteins on degradation(proteolysis) release individual amino acids. The amount of free amino acids distributed throught the body is called Amino acid pool. The amino acids undergo certain common reactions like transamination followed by deamination for the liberation of ammonia. The amino group of amino acids utilized for the formation of urea, which is the end product of protein metabolism
The urea cycle, also known as the ornithine cycle, is a biochemical pathway that plays a crucial role in the removal of toxic ammonia from the body. It takes place primarily in the liver and involves a series of enzymatic reactions that convert ammonia into urea, a less toxic compound that can be excreted through urine.
In ureotelic organisms, the ammonia deposited in
the mitochondria of hepatocytes is converted to urea in
the urea cycle. This pathway was discovered in 1932 by
Hans Krebs (who later also discovered the citric acid cycle)
and a medical student associate, Kurt Henseleit.
Urea production occurs almost exclusively in the liver
and is the fate of most of the ammonia channeled there.
The urea passes into the bloodstream and thus to the
kidneys and is excreted into the urine. The production
of urea now becomes the focus of our discussion.
2. BIOSYNTHESIS OF UREA
Urea is the major end product in Nitrogen
metabolism in humans and mammals.
NH3, the product of oxidative deamination
reaction, is toxic in even small amount and
must be removed from the body.
Urea cycle a.k.a Ornithine cycle is the
conversion reactions of NH3 into urea.
3. This reaction occur in liver (certain occur in
cytosol and mitochondria)
The urea is transported to the kidney where it
is excreted.
The overall urea formation reaction is :-
2 NH3 + CO2 + 3ATP ---> urea + H2O + 3 ADP
4.
5. One amine group comes from oxidative
deamination of glutamic acid.
While, the other amino group come from
aspartic acid.-Aspartic acid is generated from
fumaric acid produced by the urea cycle
The fumaric acid first undergoes reactions
through a portion of citric acid cycle (krebs
cycle) to produce oxaloacetic acid which is
then changed by transamination into aspartic
acid.
6. STEPS IN UREA CYCLE
1. Synthesis of carbamoyl phosphate :
Carbamoyl phosphate synthase I (CPS l) of
mitochondria catalyses the condensation of
NH4+ ions with CO2 to form carbamoyl
phosphate. This step consumes 2 ATP and is
irreversible, and rate-limiting. CPS I requires
N-acetylglutamate for its activity. Another
enzyme, carbamoyl phosphate synthase ll (CPS
ll)- involved in pyrimidine synthesis-is present in
cytosol. lt accepts amino group from glutamine
and does not require N-acetylglutamate for its
activity.
7. STEPS IN UREA CYCLE
2. Formation of citrulline : Citrulline is
synthesized from carbamoyl phosphate and
ornithine by ornithine transcarbamoylase.
Ornithine is regenerated and used in urea cycle.
Therefore, its role is comparable to that of
oxaloacetate in citric acid cycle. Ornithine and
citrulline are basic amino acids. (They are never
found in protein structure due to lack of codons).
Citrulline produced in this reaction is transported
to cytosol by a transporter system.
8. STEPS IN UREA CYCLE
3. Synthesis of arginosuccinate :
Arginosuccinate synthase condenses
citrulline with aspartate to produce
arginosuccinate. The second amino group of
urea is incorporated in this reaction. This
step requires ATP which is cleaved to AMP
and pyrophosphate (PPi). The latter is
immediately broken down to inorganic
phosphate (Pi).
9. STEPS IN UREA CYCLE
4. Cleavage of arginosuccinate :
Arginosuccinase cleaves arginosuccinate to
give arginine and fumarate. Arginine is the
immediate precursor for urea. Fumarate
liberated here provides a connecting link with
TCA cycle, gluconeogenesis etc.
10. STEPS IN UREA CYCLE
5. Formation of urea : Arginase is the fifth and
final enzyme that cleaves arginine to yield urea
and ornithine. Ornithine, so regenerated, enters
mitochondria for its reuse in the urea cycle.
Arginase is activated by Co2+ and Mn2+ Ornithine
and lysine compete with arginine (competitive
inhibition). Arginase is mostly found in the liver,
while the rest of the enzymes (four) of urea
cycle are also present in other tissues. For this
reason, Arginine synthesis may occur to
varying degrees in many tissues. But only the
liver can ultimately produce urea.