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International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 04 Issue: 12 | Dec-2017 www.irjet.net p-ISSN: 2395-0072
© 2017, IRJET | Impact Factor value: 6.171 | ISO 9001:2008 Certified Journal | Page 498
ESTIMATION, DETECTION & COMPARISON OF SOIL NUTRIENTS USING
MATLAB
Prof. Sangeetha P1, R.J. Marcus Bosco2, Allan Geoffrey A.C3, Sanjana Sharon. S4.
1Professor, Department of E&C, KNS Institute of Technology, Bangalore, India.
2,3,4Student, Department of E&C, KNS Institute of Technology, Bangalore, India.
-------------------------------------------------------------------------***------------------------------------------------------------------------
Abstract - This paper proposes a method for estimation,
detection and comparison of soil nutrient analysis
quantitatively by following the principle of chromatography
technique as chromatogram patterns which are similar to
iris patterns, we have adopted iris processing methods for
finding the different parameters such as moisture,
temperature etc at different layers from the soil sample.
Using image processing of soil chromatogram ,we find the
soil nutrients and suggest the perfect fertilizer and best
suitable crop. Testing of soil nutrients is significantly
improving the understanding of soil processes by means of
simplifying the soil testing procedures which helps to reduce
the cost and time and it will ensure the complete analysis
and complete coverage of soil testing in future.
1. INTRODUCTION
Agriculture plays a very important role in India's economy.
The chromatogram image processing provides a method in
the determination of essential components present in the
soil. This information that is provided by decoding the
chromatographic image where the fertility of the soil can
be maintained by minimizing the use of chemical
fertilizers and pesticides there by promoting organic or
natural farming. The focus of this paper is on
chromatogram image processing, which is a fundamental
step for feature extraction. Many algorithms for iris
recognition is available which can be applied for
chromatographic image. Later many researchers started
working in iris image processing which is an important
step in iris recognition. Chromatographic image processing
includes detection of the centre, normalization and
segmentation. To detect chromatogram centre, we used
different methods in MATLAB to locate the centre and find
different parameters from the soil sample.
2.BLOCK DIAGRAM
The original image is transformed into a polar image using
the centre of the chromatogram as origin.
Fig 1: Block diagram
This transformation is done using following equation.
I(x(r,θ),y(r,θ))→I(r,θ)………………...(1)
Where(r,θ)=r*cosθ+xc………………,(2)
y(r,θ)=r*sinθ+yc………………………,(3)
where (xc , yc ) is the co-ordinate of the centre of the
chromatogram, M is maximum radius which depends on
the size of the image and 0≤ θ≤2π, and 0≤r≤M. The DWT
analyses is signal based on its content that is used in
different frequency ranges. Therefore, it is very useful in
analysing repetitive patterns such as texture in the
chromatographic image of the soil sample that is being
tested or processed. The 2-D image of the
chromatographic image transform uses a wavelet
functions and its associated scaling function to decompose
the original chromatographic image into different
channels, namely the low to low(LL), low to high(LH), high
to low(HL) and high to high(HH) (A, V, H, D respectively)
channels. The process of decomposition can be repeatedly
applied to the low to low frequency channel (LL) to
generate data at the next level by processing the available
data in which the Low pass and High pass filters are used
to implement the wavelet transform from the
chromatographic image using MATLAB.
The absolute magnitude of the filter output is taken as:
aj(x,y)=│ihj(x,y)│………………………………………(4)
where ihj (x, y) is the jth channel output of the filter. A low
pass Gaussian post-filter gp (x, y) is then applied to each aj
(x, y) yielding post-filtered energy of the jth filter channel
as:
ej(x,y)=aj(x,y)**gp(x,y) …………,.………………… (5)
where,gp (x, y)= 1 2𝜋𝜎2 2 𝑒−[𝑥2+𝑦2] 2𝜎2 2
where ** denotes convolution in 2-D The feature vectors
computed from the local energy estimates are (i) mean of
A, μ [ej (x, y)] and (ii) variance of V and H, σ [ej (x, y)].
Hence every pixel in the image is represented by a 9-
dimensional (3*3) feature vector (3 colour bands, 3 DWT
sub bands).
For each region or strip in the segmentation output, we
compute the following features:
→ Area = Number of pixels in that region;
→Width = Area ⁄ N,
→N = Number of columns in the polar image;
→Area (cm2) = Area ⁄ Resolution2 (pixel/cm);
→Width (cm) = Width ⁄ Resolution (pixel/cm);
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 04 Issue: 12 | Dec-2017 www.irjet.net p-ISSN: 2395-0072
© 2017, IRJET | Impact Factor value: 6.171 | ISO 9001:2008 Certified Journal | Page 499
→Colour = Mean of multi-band intensity of the pixels in
that region.
3. SOURCE CODING
Fig 2: Polar Image Extraction
The following are the equations used in this section:
theta = atan2(Y, X)
(equation to find the Angle) ………………………………… (1)
rho = sqrt(X.^2+Y.^2)
(equation to find the radius) ……………………….……. (2)
Fig 3: Equalising the Image
Wavelets are able to remove noise while preserving the
perceptually important features. First, obtain the wavelet
transform of a noisy image down to level 5 using a bi
orthogonal spline wavelet.
LL: Low channels
LH: Low High channels
HL: High Low channels
HH: High channels
Fig 4: Parameter Extraction
Formulas:
Area = Number of pixels in that region;
Width = Area ⁄ N,
N = Number of columns in the polar image;
Area (cm2)= Area/Resolution2(pixel/cm);
Width (cm) = Width ⁄ Resolution (pixel/cm);
Color = Mean of multi-band intensity of the pixels in that
region.
Formula used:
Soil pH index=[𝑟𝑒𝑑𝑔𝑟𝑒𝑒𝑛⁄𝑏𝑙𝑢𝑒]……………………… (3)
Moisture content=|((𝐺−𝐵)(𝐵−𝑅) )|…………………. (4 )
𝑁𝑖𝑡𝑟𝑜𝑔𝑒𝑛𝑐𝑜𝑛𝑡𝑒𝑛𝑡=|((𝑅−𝐺)(𝑅−𝐵)⁄)100⁄ |………. (5)
4. SIMULATION AND RESULT
Table: 1 : Comparative table
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 04 Issue: 12 | Dec-2017 www.irjet.net p-ISSN: 2395-0072
© 2017, IRJET | Impact Factor value: 6.171 | ISO 9001:2008 Certified Journal | Page 500
The result of segmentation of the polar image of the
chromatogram, in figure. Table shows the features
extracted from each segmented strip from different layers.
A similar example of this process is shown in figure and
table. We neglect the narrow and thin strips of segments
formed in the output. These segments are irrelevant in the
characteristics of the chromatogram which reflect the soil
content. Hence, tables 5.1 and 5.2 give the features of the
prominent segments only. The advantage of
chromatogram processing (conversion from Cartesian to
polar) is now evident, as one can visually compare the
spread of the significant regions and compute with ease
the geometrical features necessary for soil analysis. In the
original circular chromatogram image, these computations
would not have been trivial
Table 2: Nutrients Comparison
From the extracted R, G, B values for the respective image,
using standard formulas the above parameters were
obtained and tabulated. Different regions contain
information about different nutrient in the soil. Hence by
using the parameters such as area, width and RGB values
of the image we can calculate the nutrients present in the
soil. With further research, we can find many other
nutrients present in the soil
Table:3 Comparing the different regions
We evaluated the success rate for the proposed method
using 50 chromatograms with diverse textures, from 500
chromatograms given by experts. For the two
chromatograms in both the figure, comparison of the
experimental results with the data given by soil experts is
listed in the table . The errors are shown separately for the
images in figure (two regions) and figure (three regions).
Our experimental results were compared with those
obtained manually by experts and the mean and maximum
errors obtained for 50 chromatograms are shown in table.
Mean error is about 1-2mm while the maximum is about
5mm compared to the chromatogram size of a radius of
75mm (approximately).
REFERENCES
[1] John Daugman, “High Confidence Visual Recognition of
Persons by a Test of Statistical Independence”, In
Proceedings of IEEE Transactions on Pattern Analysis and
Machine Intelligence, 1993, pp. 1148-1161.
[2] M. F. A. Fauzi and P. H. Lewis, “A Fully Unsupervised
Texture Segmentation Algorithm”, In Proceedings of
British Machine Vision Conference, Norwich, UK, 2003, pp.
519-528.
[3] C. Lu, P. Chung and C. Chen, “Unsupervised Texture
Segmentation Via Wavelet Transform”, Pattern
Recognition, 1997, pp. 729-742.
[4] Li Ma, Tieniu Tan, Yunhong Wang and Dexin Zhang,
“Personal Identification Based on Iris Texture Analysis”, In
Proceedings of IEEE Transactions on Pattern Analysis and
Machine Intelligence, December 2003, pp. 1519-1533.
[5] Ahamad Poursaberi and Babak N. Araabi, “A Novel Iris
Recognition System Using Morphological Edge Detector
and Wavelet Phase Features”, In Proceedings of the ICGST
International Journal on Graphics, Vision and Image
Processing, Cairo, Egypt, December 2005, pp. 9-15.
[6] Trygve Randen and John Hakon Husoy, “Filtering for
Texture Classification, A Comparative Study”, In
Proceedings of IEEE Transactions on Pattern Analysis and
Machine Intelligence, April 1999, pp. 291-310.
[7] Shivani G. Rao, Manika Puri, and Sukhendu Das,
“Unsupervised segmentation of Texture Images Using a
Combination of Gabor and Wavelet Feature”, In Indian
Conference on Computer Vision, Graphics and Image
Processing, Kolkata, India, December 2004, pp. 370-375.
[8] Qi-Chuan Tian, Quan Pan, Yong-Mei Cheng, and Quan-
Xue Gao, “Fast Algorithm and Application of Hough
Transform in Iris Segmentation”, In Proceedings of Third
International Conference on Machine Learning and
Cybernetics, Shanghai, 26-29 August 2004, pp. 3977-3980.

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Estimation, Detection & Comparison of Soil Nutrients using Matlab

  • 1. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 04 Issue: 12 | Dec-2017 www.irjet.net p-ISSN: 2395-0072 © 2017, IRJET | Impact Factor value: 6.171 | ISO 9001:2008 Certified Journal | Page 498 ESTIMATION, DETECTION & COMPARISON OF SOIL NUTRIENTS USING MATLAB Prof. Sangeetha P1, R.J. Marcus Bosco2, Allan Geoffrey A.C3, Sanjana Sharon. S4. 1Professor, Department of E&C, KNS Institute of Technology, Bangalore, India. 2,3,4Student, Department of E&C, KNS Institute of Technology, Bangalore, India. -------------------------------------------------------------------------***------------------------------------------------------------------------ Abstract - This paper proposes a method for estimation, detection and comparison of soil nutrient analysis quantitatively by following the principle of chromatography technique as chromatogram patterns which are similar to iris patterns, we have adopted iris processing methods for finding the different parameters such as moisture, temperature etc at different layers from the soil sample. Using image processing of soil chromatogram ,we find the soil nutrients and suggest the perfect fertilizer and best suitable crop. Testing of soil nutrients is significantly improving the understanding of soil processes by means of simplifying the soil testing procedures which helps to reduce the cost and time and it will ensure the complete analysis and complete coverage of soil testing in future. 1. INTRODUCTION Agriculture plays a very important role in India's economy. The chromatogram image processing provides a method in the determination of essential components present in the soil. This information that is provided by decoding the chromatographic image where the fertility of the soil can be maintained by minimizing the use of chemical fertilizers and pesticides there by promoting organic or natural farming. The focus of this paper is on chromatogram image processing, which is a fundamental step for feature extraction. Many algorithms for iris recognition is available which can be applied for chromatographic image. Later many researchers started working in iris image processing which is an important step in iris recognition. Chromatographic image processing includes detection of the centre, normalization and segmentation. To detect chromatogram centre, we used different methods in MATLAB to locate the centre and find different parameters from the soil sample. 2.BLOCK DIAGRAM The original image is transformed into a polar image using the centre of the chromatogram as origin. Fig 1: Block diagram This transformation is done using following equation. I(x(r,θ),y(r,θ))→I(r,θ)………………...(1) Where(r,θ)=r*cosθ+xc………………,(2) y(r,θ)=r*sinθ+yc………………………,(3) where (xc , yc ) is the co-ordinate of the centre of the chromatogram, M is maximum radius which depends on the size of the image and 0≤ θ≤2π, and 0≤r≤M. The DWT analyses is signal based on its content that is used in different frequency ranges. Therefore, it is very useful in analysing repetitive patterns such as texture in the chromatographic image of the soil sample that is being tested or processed. The 2-D image of the chromatographic image transform uses a wavelet functions and its associated scaling function to decompose the original chromatographic image into different channels, namely the low to low(LL), low to high(LH), high to low(HL) and high to high(HH) (A, V, H, D respectively) channels. The process of decomposition can be repeatedly applied to the low to low frequency channel (LL) to generate data at the next level by processing the available data in which the Low pass and High pass filters are used to implement the wavelet transform from the chromatographic image using MATLAB. The absolute magnitude of the filter output is taken as: aj(x,y)=│ihj(x,y)│………………………………………(4) where ihj (x, y) is the jth channel output of the filter. A low pass Gaussian post-filter gp (x, y) is then applied to each aj (x, y) yielding post-filtered energy of the jth filter channel as: ej(x,y)=aj(x,y)**gp(x,y) …………,.………………… (5) where,gp (x, y)= 1 2𝜋𝜎2 2 𝑒−[𝑥2+𝑦2] 2𝜎2 2 where ** denotes convolution in 2-D The feature vectors computed from the local energy estimates are (i) mean of A, μ [ej (x, y)] and (ii) variance of V and H, σ [ej (x, y)]. Hence every pixel in the image is represented by a 9- dimensional (3*3) feature vector (3 colour bands, 3 DWT sub bands). For each region or strip in the segmentation output, we compute the following features: → Area = Number of pixels in that region; →Width = Area ⁄ N, →N = Number of columns in the polar image; →Area (cm2) = Area ⁄ Resolution2 (pixel/cm); →Width (cm) = Width ⁄ Resolution (pixel/cm);
  • 2. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 04 Issue: 12 | Dec-2017 www.irjet.net p-ISSN: 2395-0072 © 2017, IRJET | Impact Factor value: 6.171 | ISO 9001:2008 Certified Journal | Page 499 →Colour = Mean of multi-band intensity of the pixels in that region. 3. SOURCE CODING Fig 2: Polar Image Extraction The following are the equations used in this section: theta = atan2(Y, X) (equation to find the Angle) ………………………………… (1) rho = sqrt(X.^2+Y.^2) (equation to find the radius) ……………………….……. (2) Fig 3: Equalising the Image Wavelets are able to remove noise while preserving the perceptually important features. First, obtain the wavelet transform of a noisy image down to level 5 using a bi orthogonal spline wavelet. LL: Low channels LH: Low High channels HL: High Low channels HH: High channels Fig 4: Parameter Extraction Formulas: Area = Number of pixels in that region; Width = Area ⁄ N, N = Number of columns in the polar image; Area (cm2)= Area/Resolution2(pixel/cm); Width (cm) = Width ⁄ Resolution (pixel/cm); Color = Mean of multi-band intensity of the pixels in that region. Formula used: Soil pH index=[𝑟𝑒𝑑𝑔𝑟𝑒𝑒𝑛⁄𝑏𝑙𝑢𝑒]……………………… (3) Moisture content=|((𝐺−𝐵)(𝐵−𝑅) )|…………………. (4 ) 𝑁𝑖𝑡𝑟𝑜𝑔𝑒𝑛𝑐𝑜𝑛𝑡𝑒𝑛𝑡=|((𝑅−𝐺)(𝑅−𝐵)⁄)100⁄ |………. (5) 4. SIMULATION AND RESULT Table: 1 : Comparative table
  • 3. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 04 Issue: 12 | Dec-2017 www.irjet.net p-ISSN: 2395-0072 © 2017, IRJET | Impact Factor value: 6.171 | ISO 9001:2008 Certified Journal | Page 500 The result of segmentation of the polar image of the chromatogram, in figure. Table shows the features extracted from each segmented strip from different layers. A similar example of this process is shown in figure and table. We neglect the narrow and thin strips of segments formed in the output. These segments are irrelevant in the characteristics of the chromatogram which reflect the soil content. Hence, tables 5.1 and 5.2 give the features of the prominent segments only. The advantage of chromatogram processing (conversion from Cartesian to polar) is now evident, as one can visually compare the spread of the significant regions and compute with ease the geometrical features necessary for soil analysis. In the original circular chromatogram image, these computations would not have been trivial Table 2: Nutrients Comparison From the extracted R, G, B values for the respective image, using standard formulas the above parameters were obtained and tabulated. Different regions contain information about different nutrient in the soil. Hence by using the parameters such as area, width and RGB values of the image we can calculate the nutrients present in the soil. With further research, we can find many other nutrients present in the soil Table:3 Comparing the different regions We evaluated the success rate for the proposed method using 50 chromatograms with diverse textures, from 500 chromatograms given by experts. For the two chromatograms in both the figure, comparison of the experimental results with the data given by soil experts is listed in the table . The errors are shown separately for the images in figure (two regions) and figure (three regions). Our experimental results were compared with those obtained manually by experts and the mean and maximum errors obtained for 50 chromatograms are shown in table. Mean error is about 1-2mm while the maximum is about 5mm compared to the chromatogram size of a radius of 75mm (approximately). REFERENCES [1] John Daugman, “High Confidence Visual Recognition of Persons by a Test of Statistical Independence”, In Proceedings of IEEE Transactions on Pattern Analysis and Machine Intelligence, 1993, pp. 1148-1161. [2] M. F. A. Fauzi and P. H. Lewis, “A Fully Unsupervised Texture Segmentation Algorithm”, In Proceedings of British Machine Vision Conference, Norwich, UK, 2003, pp. 519-528. [3] C. Lu, P. Chung and C. Chen, “Unsupervised Texture Segmentation Via Wavelet Transform”, Pattern Recognition, 1997, pp. 729-742. [4] Li Ma, Tieniu Tan, Yunhong Wang and Dexin Zhang, “Personal Identification Based on Iris Texture Analysis”, In Proceedings of IEEE Transactions on Pattern Analysis and Machine Intelligence, December 2003, pp. 1519-1533. [5] Ahamad Poursaberi and Babak N. Araabi, “A Novel Iris Recognition System Using Morphological Edge Detector and Wavelet Phase Features”, In Proceedings of the ICGST International Journal on Graphics, Vision and Image Processing, Cairo, Egypt, December 2005, pp. 9-15. [6] Trygve Randen and John Hakon Husoy, “Filtering for Texture Classification, A Comparative Study”, In Proceedings of IEEE Transactions on Pattern Analysis and Machine Intelligence, April 1999, pp. 291-310. [7] Shivani G. Rao, Manika Puri, and Sukhendu Das, “Unsupervised segmentation of Texture Images Using a Combination of Gabor and Wavelet Feature”, In Indian Conference on Computer Vision, Graphics and Image Processing, Kolkata, India, December 2004, pp. 370-375. [8] Qi-Chuan Tian, Quan Pan, Yong-Mei Cheng, and Quan- Xue Gao, “Fast Algorithm and Application of Hough Transform in Iris Segmentation”, In Proceedings of Third International Conference on Machine Learning and Cybernetics, Shanghai, 26-29 August 2004, pp. 3977-3980.