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Polymerase Chain Reaction (PCR)
Nucleic acids - DNA
DNA ,[object Object],[object Object],[object Object],[object Object],[object Object]
Nucleotides and nucleic acids Nucleotides  are the building blocks of  nucleic acids Nucleotide DNA RNA
Roles of nucleic acids ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
DNA synthesis in vivo ,[object Object],[object Object],[object Object],[object Object]
DNA replication ,[object Object],[object Object],[object Object]
DNA replication ,[object Object],[object Object],[object Object]
Denaturation and annealing ,[object Object],[object Object],[object Object]
Denaturation and annealing ,[object Object],[object Object],[object Object],[object Object],[object Object]
DNA synthesis in vivo ,[object Object],[object Object],[object Object]
DNA synthesis in vivo ,[object Object],[object Object],[object Object],[object Object]
Addition of a nucleotide ,[object Object],[object Object]
Polymerase chain reaction (PCR) ,[object Object],[object Object],"In Berkeley it drizzles in the winter. Avocados ripen at odd times and the tree in Fred's front yard was wet and sagging from a load of fruit. I was sagging as I walked out to my little silver Honda Civic, which never failed to start. Neither Fred, empty Becks bottles, nor the sweet smell of the dawn of the age of PCR could replace Jenny. I was lonesome."
Advances due to PCR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
PCR ,[object Object],[object Object],[object Object]
Outline ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Targets ,[object Object],[object Object],[object Object]
Targets ,[object Object],[object Object],[object Object],[object Object]
Denaturing ,[object Object],[object Object],[object Object]
Primers ,[object Object],[object Object],[object Object],[object Object]
Primers  ,[object Object],[object Object],[object Object]
Primers ,[object Object],[object Object],[object Object],[object Object],[object Object]
Primers Target DNA 5’ 3’ 3’ 5’ forward reverse
Primers ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Target DNA 5’ 3’ 3’ 5’
PCR Primers ,[object Object],[object Object],[object Object]
PCR Annealing  ,[object Object],[object Object],[object Object],[object Object]
PCR Taq DNA Polymerase ,[object Object],[object Object],[object Object]
PCR Taq DNA Polymerase ,[object Object],[object Object],[object Object],[object Object]
Polymerase chain reaction (PCR) ,[object Object],[object Object],http://www.bact.wisc.edu/Bact303/b27 T. aquaticus  was first isolated at Yellowstone. The polymerase isolated from  T. aquaticus  is commonly called  Taq  polymerase
[object Object],[object Object],[object Object],[object Object],[object Object],The reaction mixture
The basic protocol—what’s in the tube Target DNA 5’ 3’ 3’ 5’ primers A B Free nucleotides Taq  DNA polymerase Mg 2+ Mg 2+ Mg 2+ Mg 2+ Mg 2+ Mg 2+ Buffer containing magnesium
The basic protocol--denaturation Target DNA 95 o C 5’ 3’ 3’ 5’ 5’ 3’ 3’ 5’
The basic protocol--annealing ~55 o C 5’ 3’ 3’ 5’ 5’ 3’ 3’ 5’ 5’ 5’ Target DNA A B primers A B
The basic protocol--extension 72 o C 5’ 3’ 3’ 5’ 5’ 3’ 3’ 5’ 5’ 5’ Target DNA Taq  polymerase
The basic protocol--extension 72 o C 5’ 3’ 3’ 5’ 5’ 3’ 3’ 5’ 5’ 5’ Target DNA
PCR Cycles Review ,[object Object],[object Object],[object Object],[object Object]
One  One billion in about 2 hours! ,[object Object],[object Object],2 30 =1,073,741,824
PCR Requirements ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
The PCR machine ,[object Object],[object Object]
Applications of PCR ,[object Object],[object Object],[object Object],[object Object],[object Object]
Applications of PCR ,[object Object]
Applications of PCR ,[object Object],[object Object]
Applications of PCR ,[object Object],[object Object],[object Object]
Applications of PCR ,[object Object]
Applications of PCR ,[object Object]
Applications of PCR ,[object Object],[object Object]
Applications of PCR ,[object Object]
Applications of PCR ,[object Object]
Applications of PCR ,[object Object],[object Object],[object Object]
Applications of PCR ,[object Object],[object Object]
Applications of PCR ,[object Object],[object Object],[object Object],[object Object]
Application of PCR ,[object Object],[object Object]
Applications of PCR ,[object Object],[object Object]
Applications of PCR ,[object Object],[object Object],[object Object]
VARIATIONS OF PCR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
VARIATIONS OF PCR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
VARIATIONS OF PCR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Conclusion ,[object Object],[object Object]
THANK YOU

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