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Summary of
Metabolism
By- Dr. Armaan SinghBy- Dr. Armaan Singh
Basic Strategies of Catabolic
Metabolism
• Generate ATP
• Generate reducing power
• Generate building blocks for biosynthesis
ATP
• Universal currency of energy
• High phosphoryl-transfer potential
• ATP hydrolysis drives reactions by
changing the equilibrium of coupled
reactions by a factor of 108
• Generated from the oxidation of fuel
molecules
Reducing Power
• Oxidation of fuel molecules generates
NADH for mitochondrial ETC
• NADPH is generated for reducing power for
biosynthetic processes
• Pentose phosphate pathway is the major
source of NADPH
Biomolecules
• Large number of diverse macromolecules are
synthesized from a small number of building
blocks.
• Carbon skeletons from generated from the
oxidation of macromolecules provide the
building blocks for biosynthetic pathways.
• Central metabolic pathways have anabolic as
well as catabolic roles.
Relationships between catabolic and anabolic
processes
• The pathway leading to the biosynthesis of
a compound are distinct from the pathway
leading to its breakdown
• This separation ensure that the processes
are thermodynamically favorable in both
directions
• Allows for reciprocal regulation
Themes in Metabolic
Regulation
• Allosteric regulation
• Covalent modification
• Control of enzyme levels
• Compartmentalization
• Metabolic specialization of organs
Allosteric regulation
• Typically associated with enzymes that catalyze
irreversible reactions
• Allosteric regulators can cause feed back or
feedforward regualtion
• Allosteric regulators are often related to the energy
state of the cell
• This type of regulation allows for immediate response
to changes in metabolic flux (milliseconds to seconds)
• Functions at local level
Covalent Modification
• Covalent modification of last step in signal
transduction pathway
• Allows pathway to be rapidly up or down
regulated by small amounts of triggering
signal (HORMONES)
• Last longer than do allosteric regulation
(seconds to minutes)
• Functions at whole body level
Enzyme Levels
• Amount of enzyme determines rates of activity
• Regulation occurs at the level of gene expression
• Transcription, translation
• mRNA turnover, protein turnover
• Can also occur in response to hormones
• Longer term type of regulation
Compartmentalization
•One way to allow
reciprocal regulation of
catabolic and anabolic
processes
Specialization of Organs
• Regulation in higher eukaryotes
• Organs have different metabolic roles
i.e. Liver = gluconeogenesis,
Muscle = glycolysis
• Metabolic specialization is the result of
differential gene expression
Lots ATP
G-6-P
Low ATP
Need skeltons
Starvation
• Fuels change from glucose to fatty acids to
ketone bodies
Summary of metabolism lecture

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Summary of metabolism lecture

  • 1. Summary of Metabolism By- Dr. Armaan SinghBy- Dr. Armaan Singh
  • 2. Basic Strategies of Catabolic Metabolism • Generate ATP • Generate reducing power • Generate building blocks for biosynthesis
  • 3. ATP • Universal currency of energy • High phosphoryl-transfer potential • ATP hydrolysis drives reactions by changing the equilibrium of coupled reactions by a factor of 108 • Generated from the oxidation of fuel molecules
  • 4. Reducing Power • Oxidation of fuel molecules generates NADH for mitochondrial ETC • NADPH is generated for reducing power for biosynthetic processes • Pentose phosphate pathway is the major source of NADPH
  • 5. Biomolecules • Large number of diverse macromolecules are synthesized from a small number of building blocks. • Carbon skeletons from generated from the oxidation of macromolecules provide the building blocks for biosynthetic pathways. • Central metabolic pathways have anabolic as well as catabolic roles.
  • 6.
  • 7. Relationships between catabolic and anabolic processes • The pathway leading to the biosynthesis of a compound are distinct from the pathway leading to its breakdown • This separation ensure that the processes are thermodynamically favorable in both directions • Allows for reciprocal regulation
  • 8.
  • 9. Themes in Metabolic Regulation • Allosteric regulation • Covalent modification • Control of enzyme levels • Compartmentalization • Metabolic specialization of organs
  • 10. Allosteric regulation • Typically associated with enzymes that catalyze irreversible reactions • Allosteric regulators can cause feed back or feedforward regualtion • Allosteric regulators are often related to the energy state of the cell • This type of regulation allows for immediate response to changes in metabolic flux (milliseconds to seconds) • Functions at local level
  • 11. Covalent Modification • Covalent modification of last step in signal transduction pathway • Allows pathway to be rapidly up or down regulated by small amounts of triggering signal (HORMONES) • Last longer than do allosteric regulation (seconds to minutes) • Functions at whole body level
  • 12. Enzyme Levels • Amount of enzyme determines rates of activity • Regulation occurs at the level of gene expression • Transcription, translation • mRNA turnover, protein turnover • Can also occur in response to hormones • Longer term type of regulation
  • 13. Compartmentalization •One way to allow reciprocal regulation of catabolic and anabolic processes
  • 14. Specialization of Organs • Regulation in higher eukaryotes • Organs have different metabolic roles i.e. Liver = gluconeogenesis, Muscle = glycolysis • Metabolic specialization is the result of differential gene expression
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  • 18.
  • 19. Starvation • Fuels change from glucose to fatty acids to ketone bodies