Rolling circle replication is a form of DNA replication that occurs in circular DNA like plasmids, bacteriophages, and viroids. It involves five key steps: 1) a circular double-stranded DNA template is nicked at a single origin site, 2) the exposed 3' end is used to initiate replication of the leading strand while displacing the 5' end, 3) the displaced single-stranded DNA acts as the lagging strand and is replicated through Okazaki fragments, 4) both the displaced and unnicked strands are fully replicated, and 5) the displaced strand is rejoined to form a circular DNA product.
Definition - Rolling circle replication is a process of unidirectional nucleic acid replication.
* can rapidly synthesize multiple copies of circular molecules of DNA or RNA, such as plasmids.
* Eucaryotic also replicate.
* widely used in molecular biology & biomedical
nanotechnology, especially in the field of
biosensing (as a method of signal Amplification).
Steps:
Circular ds DNA will be “nicked”
3` end is elongated →Leading strand
5` end displaced → Lagging strand
made up of double stranded by OKAZAKI fragments.
4) Replication of both “ unnicked” and displaced ss DNA
5) Displaced DNA circulates and synthesis its own complementary strand.
Initation-- phosphate ends, by the action of:
a) Helicase
b) Topoisomerases
c) Single stranded binding proteins(SSBPs)
Elongation-OH group of broken strand, using the unbroken strand as a template. The polymerase will start to move in a circle for elongation, due to which it is named as Rolling Circle Model.
end will be displaced and will grow out like a waving thread.
Termination-* At the point of termination, the linear DNA molecule is cleaved from the circle resulting in a double stranded circular DNA molecule and a single- stranded linear DNA molecule.
* The linear single stranded molecule is circularized by the action of ligase and then replication to double stranded circular plasmid molecule.
Example- Conjugation of F+ and F- bacteria
Diagrammatic representation of Rolling circle
some Examples-Viral DNA
* Human herpes virus
* Human papilloma virus
* Geminivirus
Viral RNA
* pospiviridiae
* Avsunviridiae
Reference:- https://en. m. wikipedia.org
what- when- how.com
https//www.sciencedirect.com
www.slideshare.com
Genetics-notes.wikispace.com
you tube
Prescott 5th edition page.no: 236, 237
Brock biology of microorganism , page.no: 253,616
Definition - Rolling circle replication is a process of unidirectional nucleic acid replication.
* can rapidly synthesize multiple copies of circular molecules of DNA or RNA, such as plasmids.
* Eucaryotic also replicate.
* widely used in molecular biology & biomedical
nanotechnology, especially in the field of
biosensing (as a method of signal Amplification).
Steps:
Circular ds DNA will be “nicked”
3` end is elongated →Leading strand
5` end displaced → Lagging strand
made up of double stranded by OKAZAKI fragments.
4) Replication of both “ unnicked” and displaced ss DNA
5) Displaced DNA circulates and synthesis its own complementary strand.
Initation-- phosphate ends, by the action of:
a) Helicase
b) Topoisomerases
c) Single stranded binding proteins(SSBPs)
Elongation-OH group of broken strand, using the unbroken strand as a template. The polymerase will start to move in a circle for elongation, due to which it is named as Rolling Circle Model.
end will be displaced and will grow out like a waving thread.
Termination-* At the point of termination, the linear DNA molecule is cleaved from the circle resulting in a double stranded circular DNA molecule and a single- stranded linear DNA molecule.
* The linear single stranded molecule is circularized by the action of ligase and then replication to double stranded circular plasmid molecule.
Example- Conjugation of F+ and F- bacteria
Diagrammatic representation of Rolling circle
some Examples-Viral DNA
* Human herpes virus
* Human papilloma virus
* Geminivirus
Viral RNA
* pospiviridiae
* Avsunviridiae
Reference:- https://en. m. wikipedia.org
what- when- how.com
https//www.sciencedirect.com
www.slideshare.com
Genetics-notes.wikispace.com
you tube
Prescott 5th edition page.no: 236, 237
Brock biology of microorganism , page.no: 253,616
BAC & YAC are artificially prepared chromosomes to clone DNA sequences.yeast artificial chromosome is capable of carrying upto 1000 kbp of inserted DNA sequence
DNA replication is the process by which DNA makes a copy of itself during cell division.The separation of the two single strands of DNA creates a 'Y' shape called a replication 'fork'. The two separated strands will act as templates for making the new strands of DNA.
BAC & YAC are artificially prepared chromosomes to clone DNA sequences.yeast artificial chromosome is capable of carrying upto 1000 kbp of inserted DNA sequence
DNA replication is the process by which DNA makes a copy of itself during cell division.The separation of the two single strands of DNA creates a 'Y' shape called a replication 'fork'. The two separated strands will act as templates for making the new strands of DNA.
Replication Introduction , DNA replicating Models , Meselson and Stahl Experiments , Circuler Model of DNA replication , Replication in Prokaryotes , Replication In Eukaryotes , Comparison Between Prokaryotes and Eukaryotes Replicaton and PCR (Polymerease Chain Reaction)
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2. Rolling Circle Replication
• Watson & Crick (1990s)
• Replication that is seen in circular DNA
• Only one origin
• Unidirectional
• Synthesize many copies of DNA and RNA
• Example :-
▫ Plasmids
▫ Bacteriophages
▫ Viroids
3.
4. 1) Template is
circular duplex
DNA
4) Rejoining of nicked
strand
3) Elongation of
growing strand
displaces old
strand
RepA
Pol III
Pol III
3’OH
5’-P
5’-P
Growing Strand
Displaced Strand
2) Initiation occur
on one strand- nick
at origin
Displacement of nicked strand
DNA
Ligase
dsDNA
(synthesis of
first strand)
ssDNA
(synthesis of first
strand)
5. • Some eukaryotic viruses also replicate their DNA or RNA via
the rolling circle mechanism.
• Rolling circle DNA replication is initiated by an initiator protein
called RepA protein.
• The initiator protein remains bound to the 5' phosphate end of
the nicked strand, and the free 3' hydroxyl end is released to
serve as a primer for DNA synthesis by DNA polymerase III.
• Using the unnicked strand as a template, replication proceeds
around the circular DNA molecule, displacing the nicked strand
as single-stranded DNA.
6. • Helicase enzyme unwinds the strand and allows further
displacement of the nicked strand.
• SSB (single stranded DNA binding) proteins bind to the
displaced nicked strand.
• After displacement strand gets ligated by DNA ligase and
become circular.
• Later it form its complementary strand by forming loop and
removal of SSB protein takes place.
7. Summary of DNA rolling circle
Replication has five steps:
Circular dsDNA will be "nicked".
The 3' end is elongated using "unnicked" DNA as leading strand
(template); 5' end is displaced.
Displaced DNA is a lagging strand and is made double stranded
via a series of Okazaki fragments.
Replication of both "unnicked" and displaced ssDNA.
Displaced DNA circularizes.