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• The Mandavi Education Society
T.Y.Bsc(Microbiology)
Krishna prajapati
Teaching Assistance(Microbiology)
Reporter gene and gene fusions
Introduction
• DNA manipulation has revolutionary the study of
gene regulation.
• A coading sequence from one source(the
reporter)may be fused to a regulatory region
from another source.
• Such gene fusions are often used in studying gene
regulation especially where assaying the level of
the natural gene product is difficult or time
consuming.
• They may also be used to increase expression of
desired gene product.
Reporter genes
• The key property of reporter gene
is that it encodes a protein that is
easy to detect and assay.
• Reporter gene are used for
variety of purposes.
• They may used to report on the
presence or absence of particular
genetic elements(such as
plasmid)or DNA inserted within
the vector.
• They can also fused to other
genes or to promoter of other
genes so that gene expression
can be studied.
LacZ gene
• The first gene to be used
widely as reporter gene was
lacZ, which encodes the
enzyme β-galactosidase.
• Cells expressing β-
galactosidasecan be
detected by easily by their
color on indicater plates
that contain the artificial
substrates Xgal ,which
cleaved by β-galactosidase
to yield blue colour.
Blue white screening .
Conti..
Green flourescent protein(GFP)
• Another widely used
reporter gene encodes
luciferase.
• This enzymes makes cells
expressing it luminescent.
colonies containing the
reporter system can be
detected by on agar plate
by their luminscense
against a large
background of other
colonies.
Conti..
• However,the expression of luciferase depends on
more than one gene beacause several accesary
factors are needed.
• By contrast, the green fluroscent protein needs
no accessary factors and is widely used as
reporter
• Gene for was GFP was originally cloned from the
jelly Aequorea victoria,the GFP protein may be
expressed in most bacterial cell.
• It is stable and causes little or no disruption of
host cell metabolism.
Conti…
• If expression of cloned
gene linked to that of GFP,
expression of GFP signals
that the cloned gene has
also been expressed.
• Recent advance in
fluorescent labeling now
allow the simultaneous
use of multiple
fluorescent markers.
Some like that..
Gene fusion..
• It is possible to
engineering construct
that consist of segment
from two different
genes.
• such construct are
known as gene fusions.
Conti..
• If the promoter that
controls a coding
sequence is removed, the
coding sequence can be
fused to different
regularly region to place
the gene under the
control of different
promoter alternatively.
• The promoter region can
be fused to gene whose
product is east to assay.
There are two types of gene fusion
Fig..
.
Operon fusion
• In operon fusion, a coading
sequence that retain its
own translation start site
and signals is fused to the
transcriptional signals of
another gene.
Gene fusion
Protein fusion
• In protein fusion, two
coading sequence are fused
with the result that they
share the same
transcriptional and
traslational start sites and
signals.
Fig…
Conti….
• Gene fusion are often used in
studying gene regulation, especially if
measuring the level of natural gene
product is difficult and time
consuming.
• The reulatery region of the gene of
interest is fused to coding sequence
for reporter gene, such as β-
galactosidase or GFP.
• The reporter is then made under the
condition that would trigger
expression of the target gene.
• The expression of reporter is assay
under variety of condition to
determine how the gene of interest is
regulated, where as protein fusion
reveal translational cantrol.
Reporter construction
Conti..
• Gene fusion may also be used
to test for the effect of
regulatory genes.
• Mutation that effect
regulatory genes are
inroducted into cells carrying
gene fusion, and expression is
measured and compared to
cell lacking the regulatory
mutation.
• This allows the rapid screening
of multiple regulatory genes
that are suspected of
controlling the target gene.
Reporter gene and gene fusions T.Y.Bsc

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Reporter gene and gene fusions T.Y.Bsc

  • 1. • The Mandavi Education Society T.Y.Bsc(Microbiology) Krishna prajapati Teaching Assistance(Microbiology)
  • 2. Reporter gene and gene fusions
  • 3. Introduction • DNA manipulation has revolutionary the study of gene regulation. • A coading sequence from one source(the reporter)may be fused to a regulatory region from another source. • Such gene fusions are often used in studying gene regulation especially where assaying the level of the natural gene product is difficult or time consuming. • They may also be used to increase expression of desired gene product.
  • 4. Reporter genes • The key property of reporter gene is that it encodes a protein that is easy to detect and assay. • Reporter gene are used for variety of purposes. • They may used to report on the presence or absence of particular genetic elements(such as plasmid)or DNA inserted within the vector. • They can also fused to other genes or to promoter of other genes so that gene expression can be studied.
  • 5. LacZ gene • The first gene to be used widely as reporter gene was lacZ, which encodes the enzyme β-galactosidase. • Cells expressing β- galactosidasecan be detected by easily by their color on indicater plates that contain the artificial substrates Xgal ,which cleaved by β-galactosidase to yield blue colour.
  • 8. Green flourescent protein(GFP) • Another widely used reporter gene encodes luciferase. • This enzymes makes cells expressing it luminescent. colonies containing the reporter system can be detected by on agar plate by their luminscense against a large background of other colonies.
  • 9. Conti.. • However,the expression of luciferase depends on more than one gene beacause several accesary factors are needed. • By contrast, the green fluroscent protein needs no accessary factors and is widely used as reporter • Gene for was GFP was originally cloned from the jelly Aequorea victoria,the GFP protein may be expressed in most bacterial cell. • It is stable and causes little or no disruption of host cell metabolism.
  • 10. Conti… • If expression of cloned gene linked to that of GFP, expression of GFP signals that the cloned gene has also been expressed. • Recent advance in fluorescent labeling now allow the simultaneous use of multiple fluorescent markers.
  • 12. Gene fusion.. • It is possible to engineering construct that consist of segment from two different genes. • such construct are known as gene fusions.
  • 13. Conti.. • If the promoter that controls a coding sequence is removed, the coding sequence can be fused to different regularly region to place the gene under the control of different promoter alternatively. • The promoter region can be fused to gene whose product is east to assay.
  • 14. There are two types of gene fusion Fig.. . Operon fusion • In operon fusion, a coading sequence that retain its own translation start site and signals is fused to the transcriptional signals of another gene.
  • 15. Gene fusion Protein fusion • In protein fusion, two coading sequence are fused with the result that they share the same transcriptional and traslational start sites and signals. Fig…
  • 16. Conti…. • Gene fusion are often used in studying gene regulation, especially if measuring the level of natural gene product is difficult and time consuming. • The reulatery region of the gene of interest is fused to coding sequence for reporter gene, such as β- galactosidase or GFP. • The reporter is then made under the condition that would trigger expression of the target gene. • The expression of reporter is assay under variety of condition to determine how the gene of interest is regulated, where as protein fusion reveal translational cantrol.
  • 18. Conti.. • Gene fusion may also be used to test for the effect of regulatory genes. • Mutation that effect regulatory genes are inroducted into cells carrying gene fusion, and expression is measured and compared to cell lacking the regulatory mutation. • This allows the rapid screening of multiple regulatory genes that are suspected of controlling the target gene.