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By: Kanchan Rawat
 Plastids are cellular organelles with circular double
stranded DNA.
 Various forms of plastids are Amyloplast for storing
starch, Elaioplast for fat storage, Chromoplast for
pigment synthesis and storage and Choloroplast for
photosynthesis.
 Chloroplast origin is prokaryotic.
 ~900 chloroplasts per
plant cell
 Each cell contain ~10,000
identical copies of each
plastid gene.
 CpDNA is packed into
discrete structures called
chloroplast nucleoids.
 Genome size :
 120-160 kb
 Each plastid cell contain
120 genes.
 Risk of transgene escape: chloroplast genome is maternally
inherited so it provides gene containment thus reduces the
escape of transgene.
 Expression level: Higher level and multiple transgene
expression due to polycistronic mRNA.
 Homologous recombination: It minimizes the insertion of
unnecessary DNA that accompanies in nuclear genome
transformation.
 Gene silencing is absent.
 Disulphide bond formation and folding human proteins
results in high level production of proteins.
Nuclear genome Chloroplast genome
Gene silencing results in
decrease or elimination of
transgene expression.
Gene silencing is absent.
Paternal transgene inheritance
results in outcrossing among
crops and weeds.
Maternal gene inheritance in
most crop plants results in
natural gene containment.
Highly variable gene expression. Uniform gene expression.
Each transgene is independently
inserted and transcribed into a
monocistronic mRNA.
Genes transcribed into
polycistronic RNA so that
multiple transgenes can be
introduced and expressed in a
single transformation event.
 2 successful methods include biolistics and
polyethylene glycol mediated transfer.
 Biolistic DNA delivery is used when the targets in
plastids are intact tissue.
 Polyethylene glycol treatment is used for DNA
introduction into protoplasts.
 Biolistics is preferred as it is less time-consuming and
demanding.
The plastid genome segments that are included in the vector are
marked as the left (LTR) and right targeting regions (RTR). A
selectable marker gene and gene of interest is inserted in vector.
 HSA is synthesized in the liver and functions as a
carrier protein for many exogenous and endogenous
metabolites and drugs.
 It accounts for 60% of the total protein in blood
serum.
 It is the most widely used intravenous protein in a
number of human therapies.
 It is highly susceptible to proteolytic degradation in
recombinant systems and is expensive to purify.
 Very low expression levels of HSA were attained
(0.02% tsp) via nuclear transformation.
 The annual world need of HSA exceeds 500 tons.
 Only source of HSA is blood so there is chance of
transmitting pathogenic viruses.
 In addition, good recombinant systems are still not
available for many human proteins that are expensive
to purify or highly susceptible to proteolytic
degradation.
Integration of transgene cassettes into the chloroplast genome.
HSA is driven in all cassettes by the Prrn promoter upstream of the
aadA gene for spectinomycin resistance with additional promoters
and control elements.
Southern blot analysis.
b)Probe P1 and P2 used for southern blotting.
c)Lane 1:untransformed DNA; 2,3 :DNA from plants transformed with
pLDAsdHSA; 4,5: DNA from plants transformed with pLDApsbAHSA.
d)Plants for the first (T0) and second (T1) generation were analysed.
2,4: T0 generation. 3,5: T1 generation.
Analysis of HSA accumulation in transgenic chloroplasts.
(a) ELISA of HSA accumulation in leaves at different stages of development.
(b) Study after different hours of illumination. Samples of leaves were collected from
potted plants transformed with pLDApsbAHSA after the 8-h dark period or at
indicated hours in the light.
Colorimetric immunoblot detection of tobacco protein extracts
from mature leaves.
Total protein extracts were loaded in the gel. 1)pure HSA; 2: mw
marker; 3,5: untransformed plant extract; 4: pLDAsdHSA plant
extract; 6: pLDApsbAHSA plant extract.
HSA accumulation into inclusion bodies.
(a–d) EM of immunogold labelled tissues from untransformed (a)
and transformed mature leaves with the chloroplast vector
pLDApsbAHSA (b–d)
HSA extraction from inclusion bodies.
(a) SDS-PAGE gel showing 1: pure HSA; 2: marker; 3,4:soluble
fraction obtained after centrifugation of pLDApsbAHSA transformed
plant extract, 5: HSA after solubilization from the pellet; 6: proteins
from untransformed plant.
Immunoblot detection of protein extracts.
1: pure HSA; 2: HSA from a plant transformed with pLDApsbAHSA
during the solubilization process, showing mono, di and trimeric
forms; 3: proteins from an untransformed; 4: same HSA from lane 2
but in a more advanced stage of solubilization; 5: completely
monomerized HSA after the end of the solubilization treatment.
Plant T1 phenotypes
1,2: untransformed plants; 3: plant transformed with pLDAsdHSA;
4:plant transformed with pLDApsbAHSA.
 500 folds higher concentration of HSA was observed
than usual concentration.
 11.1% of tsp of HSA was observed as compared to
0.02% observed in nuclear transformation.
 Inclusion bodies facilitated purification of HSA .
 Regulatory elements eg. psbA 5’UTR served as a
model system for enhancing expression of foreign
proteins.
 Bogorad L. Engineering chloroplasts: an alternative site for foreign genes,
proteins, reactions and products. Trends Biotechnol. 2000; 18:257–263.
[PubMed: 10802561]
 Carrio MM, Corchero JL, Villaverde A. Proteolytic digestion of bacterial
inclusion body proteins during dynamic transition between soluble and
insoluble forms. Biochim Biophys Act. 1999;1434:170–176.
 Daniell H. Transformation and foreign gene expression in plants mediated
by microprojectile bombardment. Meth Mol Biol. 1997; 62:463–489.
 Daniell H. Molecular strategies for gene containment in transgenic crops.
Nat Biotechnol. 2002;20:581–586. [PubMed: 12042861].
 Staub JM, Garcia B, Graves J, Hajdukiewicz PT, Hunter P, Nehra N,
Paradkar V, Schlittler M, Carroll JA, Spatola L, Ward DYeG, Russell DA.
High-yield production of a human therapeutic protein in tobacco
chloroplasts. Nat Biotechnol. 2000; 18:333–338. [PubMed: 10700152]
 Staub JM, Maliga P. Accumulation of D1 polypeptide in tobacco plastid is
regulated via the untranslated region of the psbA mRNA. EMBO J. 1993;
12:601–606. [PubMed: 8440249]
 Staub JM, Maliga P. Translation of psbA mRNA is regulated by light via the
5′-untranslated region in tobacco plastids. Plant J. 1994; 6:547–553.
[PubMed: 7987413]

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plastome engineering

  • 2.
  • 3.  Plastids are cellular organelles with circular double stranded DNA.  Various forms of plastids are Amyloplast for storing starch, Elaioplast for fat storage, Chromoplast for pigment synthesis and storage and Choloroplast for photosynthesis.  Chloroplast origin is prokaryotic.
  • 4.  ~900 chloroplasts per plant cell  Each cell contain ~10,000 identical copies of each plastid gene.  CpDNA is packed into discrete structures called chloroplast nucleoids.  Genome size :  120-160 kb  Each plastid cell contain 120 genes.
  • 5.  Risk of transgene escape: chloroplast genome is maternally inherited so it provides gene containment thus reduces the escape of transgene.  Expression level: Higher level and multiple transgene expression due to polycistronic mRNA.  Homologous recombination: It minimizes the insertion of unnecessary DNA that accompanies in nuclear genome transformation.  Gene silencing is absent.  Disulphide bond formation and folding human proteins results in high level production of proteins.
  • 6. Nuclear genome Chloroplast genome Gene silencing results in decrease or elimination of transgene expression. Gene silencing is absent. Paternal transgene inheritance results in outcrossing among crops and weeds. Maternal gene inheritance in most crop plants results in natural gene containment. Highly variable gene expression. Uniform gene expression. Each transgene is independently inserted and transcribed into a monocistronic mRNA. Genes transcribed into polycistronic RNA so that multiple transgenes can be introduced and expressed in a single transformation event.
  • 7.  2 successful methods include biolistics and polyethylene glycol mediated transfer.  Biolistic DNA delivery is used when the targets in plastids are intact tissue.  Polyethylene glycol treatment is used for DNA introduction into protoplasts.  Biolistics is preferred as it is less time-consuming and demanding.
  • 8.
  • 9. The plastid genome segments that are included in the vector are marked as the left (LTR) and right targeting regions (RTR). A selectable marker gene and gene of interest is inserted in vector.
  • 10.
  • 11.
  • 12.  HSA is synthesized in the liver and functions as a carrier protein for many exogenous and endogenous metabolites and drugs.  It accounts for 60% of the total protein in blood serum.  It is the most widely used intravenous protein in a number of human therapies.  It is highly susceptible to proteolytic degradation in recombinant systems and is expensive to purify.  Very low expression levels of HSA were attained (0.02% tsp) via nuclear transformation.
  • 13.  The annual world need of HSA exceeds 500 tons.  Only source of HSA is blood so there is chance of transmitting pathogenic viruses.  In addition, good recombinant systems are still not available for many human proteins that are expensive to purify or highly susceptible to proteolytic degradation.
  • 14. Integration of transgene cassettes into the chloroplast genome. HSA is driven in all cassettes by the Prrn promoter upstream of the aadA gene for spectinomycin resistance with additional promoters and control elements.
  • 15. Southern blot analysis. b)Probe P1 and P2 used for southern blotting. c)Lane 1:untransformed DNA; 2,3 :DNA from plants transformed with pLDAsdHSA; 4,5: DNA from plants transformed with pLDApsbAHSA. d)Plants for the first (T0) and second (T1) generation were analysed. 2,4: T0 generation. 3,5: T1 generation.
  • 16. Analysis of HSA accumulation in transgenic chloroplasts. (a) ELISA of HSA accumulation in leaves at different stages of development. (b) Study after different hours of illumination. Samples of leaves were collected from potted plants transformed with pLDApsbAHSA after the 8-h dark period or at indicated hours in the light.
  • 17. Colorimetric immunoblot detection of tobacco protein extracts from mature leaves. Total protein extracts were loaded in the gel. 1)pure HSA; 2: mw marker; 3,5: untransformed plant extract; 4: pLDAsdHSA plant extract; 6: pLDApsbAHSA plant extract.
  • 18. HSA accumulation into inclusion bodies. (a–d) EM of immunogold labelled tissues from untransformed (a) and transformed mature leaves with the chloroplast vector pLDApsbAHSA (b–d)
  • 19. HSA extraction from inclusion bodies. (a) SDS-PAGE gel showing 1: pure HSA; 2: marker; 3,4:soluble fraction obtained after centrifugation of pLDApsbAHSA transformed plant extract, 5: HSA after solubilization from the pellet; 6: proteins from untransformed plant.
  • 20. Immunoblot detection of protein extracts. 1: pure HSA; 2: HSA from a plant transformed with pLDApsbAHSA during the solubilization process, showing mono, di and trimeric forms; 3: proteins from an untransformed; 4: same HSA from lane 2 but in a more advanced stage of solubilization; 5: completely monomerized HSA after the end of the solubilization treatment.
  • 21. Plant T1 phenotypes 1,2: untransformed plants; 3: plant transformed with pLDAsdHSA; 4:plant transformed with pLDApsbAHSA.
  • 22.  500 folds higher concentration of HSA was observed than usual concentration.  11.1% of tsp of HSA was observed as compared to 0.02% observed in nuclear transformation.  Inclusion bodies facilitated purification of HSA .  Regulatory elements eg. psbA 5’UTR served as a model system for enhancing expression of foreign proteins.
  • 23.  Bogorad L. Engineering chloroplasts: an alternative site for foreign genes, proteins, reactions and products. Trends Biotechnol. 2000; 18:257–263. [PubMed: 10802561]  Carrio MM, Corchero JL, Villaverde A. Proteolytic digestion of bacterial inclusion body proteins during dynamic transition between soluble and insoluble forms. Biochim Biophys Act. 1999;1434:170–176.  Daniell H. Transformation and foreign gene expression in plants mediated by microprojectile bombardment. Meth Mol Biol. 1997; 62:463–489.  Daniell H. Molecular strategies for gene containment in transgenic crops. Nat Biotechnol. 2002;20:581–586. [PubMed: 12042861].  Staub JM, Garcia B, Graves J, Hajdukiewicz PT, Hunter P, Nehra N, Paradkar V, Schlittler M, Carroll JA, Spatola L, Ward DYeG, Russell DA. High-yield production of a human therapeutic protein in tobacco chloroplasts. Nat Biotechnol. 2000; 18:333–338. [PubMed: 10700152]  Staub JM, Maliga P. Accumulation of D1 polypeptide in tobacco plastid is regulated via the untranslated region of the psbA mRNA. EMBO J. 1993; 12:601–606. [PubMed: 8440249]  Staub JM, Maliga P. Translation of psbA mRNA is regulated by light via the 5′-untranslated region in tobacco plastids. Plant J. 1994; 6:547–553. [PubMed: 7987413]