The document summarizes the retrosynthetic analysis and total synthesis of the natural product callipeltoside C. The retrosynthesis breaks the molecule down into 3 main fragments - the sugar portion, middle section, and bottom half. The synthesis proceeds by synthesizing each fragment separately and coupling them together, with the sugar portion requiring the most steps due to protecting group manipulation and diastereoselective transformations. The total synthesis takes 18 linear steps to assemble all the fragments and achieve the target natural product.
1. Group theory is the mathematical treatment of symmetry and involves identifying symmetry operations and elements in molecules and determining their point groups.
2. Common symmetry operations include rotations, reflections in mirror planes, and inversion through a center. Point groups are assigned based on the symmetry elements present.
3. Understanding molecular symmetry is important for discussing molecular spectroscopy and calculating molecular properties. The symmetry properties of BF3 and BF2H differ despite similarities in bond distances.
The document discusses various carbonyl condensation reactions including aldol reactions, Claisen condensations, Michael additions, and the Robinson annulation reaction. These reactions involve the nucleophilic addition of carbonyl compounds to alpha,beta-unsaturated carbonyl systems, forming new carbon-carbon bonds. Key steps include enolate formation, Michael additions, aldol additions, and intramolecular cyclization reactions to form ring systems.
The racemic dibromide undergoes an E2 elimination with pyridine as the base to give the trans product selectively. This is because the anti-periplanar conformation required for E2 is favored for one enantiomer due to less steric interaction between the phenyl groups.
The meso dibromide cannot undergo such a stereospecific E2 reaction. Instead, it undergoes a thermally allowed homolytic cleavage of the weaker C-Br bond to eliminate Br2. This reaction does not require a particular transition state geometry.
The document discusses asymmetric synthesis, which is the synthesis of a single enantiomer of a chiral compound. It covers retrosynthetic analysis, using disconnections to plan multi-step syntheses. Functional group interconversion and two-group disconnections are recommended to avoid chemoselectivity problems. Chiral auxiliaries and resolving agents can be used to separate enantiomers. Chiral auxiliaries induce diastereoselectivity through steric effects to yield a single enantiomer of the product. An example reaction is given to synthesize (S)-1-(pyridine-3-yl)propan-1-ol using a chiral catalyst.
The anomeric effect was discovered in 1955 with the work of J.T. Edward, N.-J. Chu, and R.U. Lemieux.
Contributed by: Cody F. Bender, Charles E. Price (Undergraduates), University of Utah, 2016
Basic Concepts Of Retrosynthesis (Part1)munirnizami
1. The document discusses the basic concepts of retrosynthetic analysis in organic synthesis. Retrosynthesis is the process of working backward from a target molecule to design synthetic routes using disconnections and functional group interconversions.
2. Key concepts include synthons, which are idealized fragments formed by imagined bond cleavages, and synthetic equivalents, which are actual reagents that can function as those synthons.
3. Effective retrosynthesis requires understanding reaction mechanisms and reliable reactions, as well as considering availability of starting materials and stereochemistry.
The document discusses symmetry operations and point groups in molecules. It defines five basic symmetry operations: identity, n-fold rotation, reflection, inversion, and improper n-fold rotation. Point groups describe the symmetry elements and operations in a molecule. There are 32 possible point groups that molecules can belong to depending on their specific symmetry properties. The document provides examples of molecules and their corresponding point groups.
1. Group theory is the mathematical treatment of symmetry and involves identifying symmetry operations and elements in molecules and determining their point groups.
2. Common symmetry operations include rotations, reflections in mirror planes, and inversion through a center. Point groups are assigned based on the symmetry elements present.
3. Understanding molecular symmetry is important for discussing molecular spectroscopy and calculating molecular properties. The symmetry properties of BF3 and BF2H differ despite similarities in bond distances.
The document discusses various carbonyl condensation reactions including aldol reactions, Claisen condensations, Michael additions, and the Robinson annulation reaction. These reactions involve the nucleophilic addition of carbonyl compounds to alpha,beta-unsaturated carbonyl systems, forming new carbon-carbon bonds. Key steps include enolate formation, Michael additions, aldol additions, and intramolecular cyclization reactions to form ring systems.
The racemic dibromide undergoes an E2 elimination with pyridine as the base to give the trans product selectively. This is because the anti-periplanar conformation required for E2 is favored for one enantiomer due to less steric interaction between the phenyl groups.
The meso dibromide cannot undergo such a stereospecific E2 reaction. Instead, it undergoes a thermally allowed homolytic cleavage of the weaker C-Br bond to eliminate Br2. This reaction does not require a particular transition state geometry.
The document discusses asymmetric synthesis, which is the synthesis of a single enantiomer of a chiral compound. It covers retrosynthetic analysis, using disconnections to plan multi-step syntheses. Functional group interconversion and two-group disconnections are recommended to avoid chemoselectivity problems. Chiral auxiliaries and resolving agents can be used to separate enantiomers. Chiral auxiliaries induce diastereoselectivity through steric effects to yield a single enantiomer of the product. An example reaction is given to synthesize (S)-1-(pyridine-3-yl)propan-1-ol using a chiral catalyst.
The anomeric effect was discovered in 1955 with the work of J.T. Edward, N.-J. Chu, and R.U. Lemieux.
Contributed by: Cody F. Bender, Charles E. Price (Undergraduates), University of Utah, 2016
Basic Concepts Of Retrosynthesis (Part1)munirnizami
1. The document discusses the basic concepts of retrosynthetic analysis in organic synthesis. Retrosynthesis is the process of working backward from a target molecule to design synthetic routes using disconnections and functional group interconversions.
2. Key concepts include synthons, which are idealized fragments formed by imagined bond cleavages, and synthetic equivalents, which are actual reagents that can function as those synthons.
3. Effective retrosynthesis requires understanding reaction mechanisms and reliable reactions, as well as considering availability of starting materials and stereochemistry.
The document discusses symmetry operations and point groups in molecules. It defines five basic symmetry operations: identity, n-fold rotation, reflection, inversion, and improper n-fold rotation. Point groups describe the symmetry elements and operations in a molecule. There are 32 possible point groups that molecules can belong to depending on their specific symmetry properties. The document provides examples of molecules and their corresponding point groups.
The document summarizes dihydrofolate reductase (DHFR) enzyme. DHFR catalyzes the reduction of dihydrofolate to tetrahydrofolate using NADPH as a cofactor. It is found in both prokaryotic and eukaryotic cells and is essential for purine and thymidylate synthesis required for cell growth. The structure of DHFR contains beta sheets and alpha helices that form two subdomains containing the active site. Several inhibitors target DHFR including trimethoprim, methotrexate, and pyrimethamine. These inhibitors mimic the structure of dihydrofolate and bind tightly in the active site to inhibit the enzyme.
Functional group interconversion simple examplesBakhtawarRasheed
The document summarizes various methods for interconverting functional groups, including increasing or decreasing the carbon chain length, and transforming between single, double, and triple bonds. It also outlines reactions such as converting alcohols to aldehydes or carboxylic acids; aldehydes to alcohols; carboxylic acids to esters or amines; amines to amides, nitriles, or nitro groups; and nitro groups to amines. The document was prepared by Rimsha Bakhtawar Rasheed as part of an MSc in Chemistry coursework.
This document provides an introduction to retrosynthesis, which involves working backwards from a target molecule to devise a synthetic route. It discusses key terminology like disconnections, synthons, and functional group interconversions. The principles of retrosynthesis are disconnection, where an imaginary bond cleavage corresponds to a synthetic reaction, and functional group interconversion, which involves changing one functional group to another. Examples of retrosynthesis are provided for drugs like ofornine and paracetamol to illustrate these concepts.
This document provides an overview of coupling reactions, specifically palladium-catalyzed cross coupling reactions. It discusses the types of coupling reactions, including heterocouplings and homocouplings. Reductive elimination and beta hydride elimination are important reaction mechanisms. Organometallic reagents like organolithium and organomagnesium compounds are commonly used in coupling reactions. Examples of coupling reactions discussed include the Heck, Suzuki, and Stille reactions, and the mechanisms of the Heck reaction are outlined in steps of oxidative addition, π complex formation, insertion, and elimination.
The Horner-Wadsworth-Emmons (HWE) reaction involves reacting a phosphonate with an aldehyde or ketone in the presence of a strong base to form an alkene. The reaction proceeds through a three step mechanism: 1) deprotonation of the methylene group of the phosphonate by the base, 2) reaction of the carbanion intermediate with the carbonyl group to form a tetrahedral intermediate, and 3) elimination of the phosphate group to form the alkene product. The HWE reaction is useful for synthesizing alkenes from carbonyl compounds and has advantages over the Wittig reaction such as producing E-alkene products and having an easier
The document discusses pericyclic reactions and the Woodward-Hoffmann rules for predicting their stereochemistry. It begins by defining pericyclic reactions as concerted reactions where bonds are formed or broken in a cyclic transition state. It then provides examples of different types of pericyclic reactions, including electrocyclizations, cycloadditions, and sigmatropic rearrangements. The Woodward-Hoffmann theory is explained, showing how it can be used to predict whether a reaction will proceed with antarafacial conrotation or suprafacial disrotation based on whether the reaction is thermally or photochemically induced. Specific examples like cyclobutene formation and the Diels-Alder reaction are analyzed in
A primer to designing organic synthesismohammed rida
[1] Disconnection of simple alcohols can involve breaking the O-H bond to form synthons such as R-OH and H+. Common reactions to reconnect include substitution reactions of alcohols with alkyl halides, cyanides, or Grignard reagents.
[2] Disconnection of simple olefins can involve breaking a C=C bond to form carbocation and carbanion synthons. Reconnection is achieved using reactions such as Wittig olefination.
[3] Retrosynthetic analysis of molecules involves breaking bonds through disconnections or changing functional groups to arrive at simpler starting materials through multiple retrosynthetic steps until commercially available reagents are reached.
Ugi reaction multicomponent reactions for drug discovery!Dipakchandra Sarkar
The Ugi reaction is a multi-component reaction discovered in 1959 by Prof. Ivar Karl Ugi that combines a ketone or aldehyde, an amine, an isocyanide, and a carboxylic acid to form a bis-amide. It is useful for drug discovery as changing the substituents on the components allows generation of large chemical libraries. The Ugi reaction proceeds rapidly at room temperature without a catalyst and has high atom economy and chemical yield.
It includes the UGI reaction & Brook rearrangement.
mechanism & application also included that presentation.
student will be helpful for easilly available this reaction.
The Mitsunobu reaction allows the conversion of alcohols to various functional groups using trialkyl/triaryl phosphine and dialkyl azodicarboxylate reagents. It proceeds via an oxidation-reduction mechanism. Common applications include esterification, etherification, and N-alkylation reactions. Recent advances have focused on replacing conventional reagents to improve selectivity and yields. The Mitsunobu reaction has been widely used in the synthesis of natural products and pharmaceuticals.
Rearrangement reactions involve the migration of an atom or group within the same molecule. A 1,2-shift is a migration from one atom to an adjacent atom. The Favorskii rearrangement involves the rearrangement of cyclopropanones and α-halo ketones in the presence of a base, forming carboxylic acids or derivatives. For cyclic α-halo ketones, the Favorskii rearrangement causes a ring contraction from a 6-membered to a 5-membered ring.
This document provides an introduction to cells, membranes, and membrane potential. It discusses the key components of cells, including proteins and DNA bases. Membrane structures are examined, including the phospholipid bilayer and integral membrane proteins. The document also covers the theory of membrane potential and interfacial electron transfer in biological systems, such as the adsorption of proteins onto metals from solution.
Bio inspired metal-oxo catalysts for c–h bond functionalizationDaniel Morton
Metal-oxo complexes are important species in the activation of strong C–H bonds in biological systems. The high reactivity of metal-oxo complexes results from the way their valence electrons are arranged, and this arrangement depends strongly on the geometry around the metal center.
Contributed by: A.S. Borovik and Sarah Cook, University of California-Irvine, 2014
1) The document summarizes key concepts about ketones and aldehydes from an organic chemistry textbook chapter, including their structures, nomenclature, physical properties, reactions, and industrial uses.
2) Methods of synthesizing ketones and aldehydes are discussed, including oxidation of alcohols, Friedel-Crafts acylation, and reactions of nitriles, acid chlorides, and carboxylic acids.
3) Common reactions of ketones and aldehydes described include nucleophilic addition, hydration, imine and acetal formation, reductions, and oxidations.
The document discusses several named organic reactions including the Ugi reaction, Ullmann reaction, and Brook rearrangement. The Ugi reaction involves combining an isocyanide, carboxylic acid, amine, and carbonyl compound to form diamides. The Ullmann reaction involves copper-catalyzed coupling of aryl halides to form symmetric biaryls. The Brook rearrangement involves a rearrangement where an organosilyl group switches position with a hydroxyl proton over a carbon-oxygen bond in the presence of a base to form a silyl ether.
The document discusses various pericyclic reactions including cycloaddition reactions. It describes the Alder ene reaction, Diels-Alder reaction, and 1,3-dipolar cycloaddition reactions. These reactions involve the concerted formation of new sigma bonds from pi bonds in a single step without intermediates. The document also discusses factors that influence the regioselectivity and stereoselectivity of these reactions such as orbital interactions and substituents.
The document discusses various topics related to chirality and stereochemistry including:
- Different forms that can exhibit chirality beyond just tetrahedral stereocenters.
- The relationship between enantiomers, diastereomers, and meso compounds for molecules with multiple stereocenters.
- How purity of chiral compounds is measured in terms of enantiomeric excess and ratio, and diastereomeric excess and ratio.
- Common methods for determining enantiomeric excess such as derivatization reactions and chiral chromatography.
More problems covering asymmetric synthesis. This time with examples of substrate control, chiral reagents, and chiral catalysis. Also another example of a synthesis.
The document summarizes dihydrofolate reductase (DHFR) enzyme. DHFR catalyzes the reduction of dihydrofolate to tetrahydrofolate using NADPH as a cofactor. It is found in both prokaryotic and eukaryotic cells and is essential for purine and thymidylate synthesis required for cell growth. The structure of DHFR contains beta sheets and alpha helices that form two subdomains containing the active site. Several inhibitors target DHFR including trimethoprim, methotrexate, and pyrimethamine. These inhibitors mimic the structure of dihydrofolate and bind tightly in the active site to inhibit the enzyme.
Functional group interconversion simple examplesBakhtawarRasheed
The document summarizes various methods for interconverting functional groups, including increasing or decreasing the carbon chain length, and transforming between single, double, and triple bonds. It also outlines reactions such as converting alcohols to aldehydes or carboxylic acids; aldehydes to alcohols; carboxylic acids to esters or amines; amines to amides, nitriles, or nitro groups; and nitro groups to amines. The document was prepared by Rimsha Bakhtawar Rasheed as part of an MSc in Chemistry coursework.
This document provides an introduction to retrosynthesis, which involves working backwards from a target molecule to devise a synthetic route. It discusses key terminology like disconnections, synthons, and functional group interconversions. The principles of retrosynthesis are disconnection, where an imaginary bond cleavage corresponds to a synthetic reaction, and functional group interconversion, which involves changing one functional group to another. Examples of retrosynthesis are provided for drugs like ofornine and paracetamol to illustrate these concepts.
This document provides an overview of coupling reactions, specifically palladium-catalyzed cross coupling reactions. It discusses the types of coupling reactions, including heterocouplings and homocouplings. Reductive elimination and beta hydride elimination are important reaction mechanisms. Organometallic reagents like organolithium and organomagnesium compounds are commonly used in coupling reactions. Examples of coupling reactions discussed include the Heck, Suzuki, and Stille reactions, and the mechanisms of the Heck reaction are outlined in steps of oxidative addition, π complex formation, insertion, and elimination.
The Horner-Wadsworth-Emmons (HWE) reaction involves reacting a phosphonate with an aldehyde or ketone in the presence of a strong base to form an alkene. The reaction proceeds through a three step mechanism: 1) deprotonation of the methylene group of the phosphonate by the base, 2) reaction of the carbanion intermediate with the carbonyl group to form a tetrahedral intermediate, and 3) elimination of the phosphate group to form the alkene product. The HWE reaction is useful for synthesizing alkenes from carbonyl compounds and has advantages over the Wittig reaction such as producing E-alkene products and having an easier
The document discusses pericyclic reactions and the Woodward-Hoffmann rules for predicting their stereochemistry. It begins by defining pericyclic reactions as concerted reactions where bonds are formed or broken in a cyclic transition state. It then provides examples of different types of pericyclic reactions, including electrocyclizations, cycloadditions, and sigmatropic rearrangements. The Woodward-Hoffmann theory is explained, showing how it can be used to predict whether a reaction will proceed with antarafacial conrotation or suprafacial disrotation based on whether the reaction is thermally or photochemically induced. Specific examples like cyclobutene formation and the Diels-Alder reaction are analyzed in
A primer to designing organic synthesismohammed rida
[1] Disconnection of simple alcohols can involve breaking the O-H bond to form synthons such as R-OH and H+. Common reactions to reconnect include substitution reactions of alcohols with alkyl halides, cyanides, or Grignard reagents.
[2] Disconnection of simple olefins can involve breaking a C=C bond to form carbocation and carbanion synthons. Reconnection is achieved using reactions such as Wittig olefination.
[3] Retrosynthetic analysis of molecules involves breaking bonds through disconnections or changing functional groups to arrive at simpler starting materials through multiple retrosynthetic steps until commercially available reagents are reached.
Ugi reaction multicomponent reactions for drug discovery!Dipakchandra Sarkar
The Ugi reaction is a multi-component reaction discovered in 1959 by Prof. Ivar Karl Ugi that combines a ketone or aldehyde, an amine, an isocyanide, and a carboxylic acid to form a bis-amide. It is useful for drug discovery as changing the substituents on the components allows generation of large chemical libraries. The Ugi reaction proceeds rapidly at room temperature without a catalyst and has high atom economy and chemical yield.
It includes the UGI reaction & Brook rearrangement.
mechanism & application also included that presentation.
student will be helpful for easilly available this reaction.
The Mitsunobu reaction allows the conversion of alcohols to various functional groups using trialkyl/triaryl phosphine and dialkyl azodicarboxylate reagents. It proceeds via an oxidation-reduction mechanism. Common applications include esterification, etherification, and N-alkylation reactions. Recent advances have focused on replacing conventional reagents to improve selectivity and yields. The Mitsunobu reaction has been widely used in the synthesis of natural products and pharmaceuticals.
Rearrangement reactions involve the migration of an atom or group within the same molecule. A 1,2-shift is a migration from one atom to an adjacent atom. The Favorskii rearrangement involves the rearrangement of cyclopropanones and α-halo ketones in the presence of a base, forming carboxylic acids or derivatives. For cyclic α-halo ketones, the Favorskii rearrangement causes a ring contraction from a 6-membered to a 5-membered ring.
This document provides an introduction to cells, membranes, and membrane potential. It discusses the key components of cells, including proteins and DNA bases. Membrane structures are examined, including the phospholipid bilayer and integral membrane proteins. The document also covers the theory of membrane potential and interfacial electron transfer in biological systems, such as the adsorption of proteins onto metals from solution.
Bio inspired metal-oxo catalysts for c–h bond functionalizationDaniel Morton
Metal-oxo complexes are important species in the activation of strong C–H bonds in biological systems. The high reactivity of metal-oxo complexes results from the way their valence electrons are arranged, and this arrangement depends strongly on the geometry around the metal center.
Contributed by: A.S. Borovik and Sarah Cook, University of California-Irvine, 2014
1) The document summarizes key concepts about ketones and aldehydes from an organic chemistry textbook chapter, including their structures, nomenclature, physical properties, reactions, and industrial uses.
2) Methods of synthesizing ketones and aldehydes are discussed, including oxidation of alcohols, Friedel-Crafts acylation, and reactions of nitriles, acid chlorides, and carboxylic acids.
3) Common reactions of ketones and aldehydes described include nucleophilic addition, hydration, imine and acetal formation, reductions, and oxidations.
The document discusses several named organic reactions including the Ugi reaction, Ullmann reaction, and Brook rearrangement. The Ugi reaction involves combining an isocyanide, carboxylic acid, amine, and carbonyl compound to form diamides. The Ullmann reaction involves copper-catalyzed coupling of aryl halides to form symmetric biaryls. The Brook rearrangement involves a rearrangement where an organosilyl group switches position with a hydroxyl proton over a carbon-oxygen bond in the presence of a base to form a silyl ether.
The document discusses various pericyclic reactions including cycloaddition reactions. It describes the Alder ene reaction, Diels-Alder reaction, and 1,3-dipolar cycloaddition reactions. These reactions involve the concerted formation of new sigma bonds from pi bonds in a single step without intermediates. The document also discusses factors that influence the regioselectivity and stereoselectivity of these reactions such as orbital interactions and substituents.
The document discusses various topics related to chirality and stereochemistry including:
- Different forms that can exhibit chirality beyond just tetrahedral stereocenters.
- The relationship between enantiomers, diastereomers, and meso compounds for molecules with multiple stereocenters.
- How purity of chiral compounds is measured in terms of enantiomeric excess and ratio, and diastereomeric excess and ratio.
- Common methods for determining enantiomeric excess such as derivatization reactions and chiral chromatography.
More problems covering asymmetric synthesis. This time with examples of substrate control, chiral reagents, and chiral catalysis. Also another example of a synthesis.
1. The document describes several organic reactions and asks questions about determining product structures and rationalizing stereochemical outcomes.
2. Key concepts discussed include: conformational analysis to determine reactivity; Cram chelation control to set stereochemistry; Ireland-Claisen rearrangements maintaining configuration; and using chiral auxiliaries to induce diastereoselectivity through chelation.
3. Rationalizations of stereochemical outcomes involve analyzing transition states, identifying favored conformations, and determining approach selectivity based on steric interactions.
General introduction to the course followed by a basic introduction to asymmetric or stereoselective Synthesis. Then starting the course proper by looking at substrate control.
Gives an introduction to total synthesis and why we do it (which reminds me, I must add a picture of Everest, as I think the fact that 'it is there' is the main reason for most syntheses). Then to introduce the topic with a reasonably simple synthesis, we will look at an example of the synthesis of Tamiflu.
Use of stoichiometric amounts of a chiral source. The usual suspects will be discussed, including borane reagents (mostly pinene derivatives) and the Brown allylation.
The document describes several reactions involving conjugate additions and discusses the stereochemical outcomes. It rationalizes the stereoselectivity using concepts like chair conformations, Felkin-Anh control, and Cram chelation control. By analyzing the transition states and preferred conformations, it is able to explain why the reactions favor one stereoisomer over another in each case.
The document discusses the concept of substrate control in directed epoxidation reactions. It shows that when performing epoxidation reactions on substrates containing multiple oxidizable positions, the reaction preferentially forms epoxides at positions that minimize 1,3-allylic strain. Substrate control allows for high regioselectivity in epoxidation based on sterics and substrate conformation. Directed epoxidation reactions can achieve up to 99:1 regioselectivity through substrate control and transition state stabilization.
Self explanatory really, this lecture looks at chiral auxiliaries. We will concentrate on oxazolidinones in alkylations, aldol reaction and the Diels-Alder reaction. There will be a couple examples of other auxiliaries.
This is the biggy, the one everyone wants to achieve. Here we will be looking at metal-based chiral catalysis. We will concentrate on bisoxazoline-based Lewis acid catalysis and then look at reductions before finishing with the ubiquitous Sharpless epoxidation and dihydroxylation.
A look at epothilone A as it includes examples of many different forms of asymmetric synthesis. Also includes a little bit about ring-closing metathesis.
The document discusses the total synthesis of ibuprofen and the antihypertensive drug valsartan from starting materials.
For ibuprofen, a retrosynthetic analysis is performed to arrive at reactions to connect the starting materials in the forward sense. For valsartan, a retrosynthesis is proposed using a carboxylic acid starting material and an amine.
Lastly, a retrosynthesis is proposed for an asymmetric molecule shown, dividing it into two subunits that can be synthesized and coupled using reactions like Mitsunobu, Brown allylation/crotylation, and peptide coupling.
This document summarizes the synthesis of the anti-cancer compound epothilone A. It discusses the retrosynthesis of epothilone C and the synthesis of the required fragments - C1-C6, C7-C12, and C13-C21. These fragments were coupled and the ring was formed using ring-closing metathesis. Finally, epothilone C was converted to the target compound epothilone A through oxidation and reduction reactions. The synthesis utilized substrate-controlled aldol reactions, Sharpless asymmetric dihydroxylation, and ring-closing metathesis to construct the molecule with high stereoselectivity.
Chiral catalysis. This is a relatively brief look at some classic examples of chiral catalysis in organic synthesis. It gives a quick overview but does not go into any detail.
The big topic of the last few years, the use of small organic molecules to catalyse enantioselective transformations. This lecture will start with proline before moving on to some of MacMillan's contributions to this field and, finally, finish with hydrogen bond catalysts and Brønsted acids.
An introduction to total synthesis and retrosynthesis. A quick overview of retrosynthesis followed by one of the many syntheses of (–)-stenine. This is just an overview of the fascinating world of organic synthesis, it is not intended to teach retrosynthesis or organic synthesis. For that see some of my other lecture notes.
The document summarizes key concepts from Lecture Seven on alkenes and alkynes. It discusses hydrogenation of alkenes and alkynes using catalysts like Pd/C, including syn and anti addition. It provides an example of the hydrogenation of resiniferatoxin. It also explains the importance of stereochemistry in hydrogenation reactions and mechanisms of addition. Partial hydrogenation reactions using Lindlar catalyst or Na/NH3 are described. The mechanism of radical additions is shown.
The document discusses the DIBANET project which aims to produce diesel miscible biofuels from biomass residues and wastes. It outlines initial goals of producing levulinic acid from sugars and esterifying it with ethanol to make ethyl levulinate. Levulinic acid is described as a platform chemical that can be derived from carbohydrates and used to make numerous fuels, chemicals, and materials. The major components of lignocellulosic biomass are identified as cellulose, hemicellulose, and lignin. Acid hydrolysis is discussed as a purely chemical process to break biomass down into sugars and further into levulinic acid, formic acid, and other products. Conversion rates and
The document discusses macromolecules called polymers that are composed of smaller molecules called monomers. There are three main classes of polymers in living things: carbohydrates, proteins, and nucleic acids. Carbohydrates include sugars and their polymers. Examples of sugars are monosaccharides like glucose and fructose. Carbohydrate polymers include starch, a polymer of glucose found in plants for energy storage, and glycogen, a glucose polymer that stores energy in animals. Proteins and nucleic acids are also important macromolecules composed of monomers.
This chapter discusses biological molecules and carbon chemistry. Carbon atoms can form up to four bonds and are versatile building blocks of organic molecules. Organic molecules contain carbon and often have functional groups that determine properties like polarity and reactivity. Lipids are nonpolar and include fats and fatty acids. Fats are made of glycerol bonded to three fatty acids, releasing water. This forms triglycerides, the main energy storage molecules in animals.
The Arbuzov reaction is the nucleophilic substitution reaction of a trialkylphosphite with an alkyl halide to form a trialkylphosphite ester.
The general reaction is:
ROPO(OR')2 + R'X → ROP(O)(OR')OR' + X-
Where R and R' can be alkyl groups of varying size.
The reaction proceeds through an S N2 mechanism. The trialkylphosphite acts as a nucleophile, with the phosphoryl oxygen attacking the electrophilic carbon of the alkyl halide. This occurs with inversion of configuration at the carbon.
The leaving group, X-, departs, forming the trialkylphosphite est
Hemicellulose extraction from wood OSB strandsroryjara
Extraction of wood components from OSB strands using hot water. A composition of the liquid phase (extract) is given for different extraction conditions. Mechanical properties of OSB panels made with the extracted wood are compared with standard panels.
The document discusses the key elements and organic molecules that make up living things. It notes that 96% of the human body is made up of oxygen, carbon, hydrogen, and nitrogen. The four main groups of organic molecules are carbohydrates, lipids, nucleic acids, and proteins. Carbohydrates like sugars provide fuel for cells. Lipids store energy and make up cell membranes. Nucleic acids contain genetic information. Proteins perform many cell functions.
This document discusses the antibiotic tetracycline. It belongs to a group of antibiotics called tetracyclines which are obtained through fermentation of Streptomyces bacteria. Tetracycline has a complex stereochemistry and exists as a zwitterion. It works by inhibiting bacterial protein synthesis by binding to the 30S ribosomal subunit. It is stable under acidic conditions but forms anhydrotetracycline, while under basic conditions it opens to form isotetracycline. It forms insoluble chelates with metals. Tetracycline has broad-spectrum activity against many gram-positive and gram-negative bacteria.
1. Glycolysis takes place in the cytosol and involves the conversion of glucose to glucose-6-phosphate through a reaction catalyzed by hexokinase using ATP as an energy source.
2. Glucose-6-phosphate then undergoes a series of reactions catalyzed by different enzymes to produce two molecules of pyruvate, involving phosphorylation, isomerization, and cleavage reactions.
3. These reactions initially require energy input in the form of ATP but later reactions produce ATP and NADH, which are used in downstream metabolic pathways.
The document discusses the stability of pharmaceutical formulations. It defines stability as a formulation remaining within its physical, chemical, microbiological, therapeutic and toxicological specifications. Stability is important to ensure drug products maintain quality and intended effects until expiration. Chemical and physical degradation pathways include hydrolysis, oxidation, photodegradation, and interactions with excipients or other drugs. Factors like temperature, pH, moisture, and light can affect the rate of degradation. The document focuses on hydrolysis and oxidation as two major degradation pathways and provides examples of each.
Carbohydrates and lipids are both made up of carbon, hydrogen, and oxygen. Carbohydrates are composed of monosaccharides that can bond to form disaccharides or polysaccharides. They serve as energy sources and structure. Lipids are made of fatty acid subunits that form triglycerides for energy storage or phospholipids that make up cell membranes. Both play important structural and energy-related roles in the body.
Senna glycoside is a type of anthraquinone glycoside found in senna leaves. It consists mainly of dimeric anthracene glycosides called sennosides. Sennosides include sennoside A, B, C and D which contain rhein and/or emodin anthrones joined by C-C bonds. Their purgative effects are due to the anthracene aglycones which are released in the large intestine. Hydroxylation and the degree of oxidation impact activity. Glycosylation allows transport to the intestine. Senna preparations are used as laxatives and cathartics and work by stimulating intestinal peristalsis.
A lecture I almost had to give as a 'stand-in' for one of my colleagues. Probably the fastest I've ever prepared a lecture and the first time I have taken someone else's notes and effectively given them a 'presentation make-over. Never did give it but it seems pointless having it sitting around on my hard drive.
The document summarizes the process of glycolysis. It begins with glucose being phosphorylated to glucose-6-phosphate by hexokinase. Glucose-6-phosphate then undergoes isomerization and a series of phosphorylation and dephosphorylation reactions to yield two molecules of pyruvate. Energy from glucose is initially stored as ATP and later released. Key steps include phosphofructokinase regulating flux and glyceraldehyde-3-phosphate dehydrogenase generating NADH.
The document discusses the structure and properties of monosaccharides and polysaccharides. It describes how glucose is converted to sorbitol and mannitol through reduction with sodium amalgam. It also discusses the cyclic structures that monosaccharides like glucose and fructose form through intramolecular reactions, forming pyranoses and furanoses. Additionally, it describes common storage polysaccharides like starch and glycogen, noting that starch consists of amylose and amylopectin while glycogen serves as the main storage polysaccharide in animals.
Carbohydrates can be classified into 4 main groups:
1) Monosaccharides which include simple sugars that cannot be further broken down, such as glucose and fructose.
2) Disaccharides formed from two monosaccharides joined together like sucrose.
3) Oligosaccharides containing 3-10 monosaccharide units such as raffinose.
4) Polysaccharides consisting of long chains of monosaccharide units like starch, cellulose, and glycogen.
Carbohydrates serve important functions like energy storage, structural support, and participating in biological processes. They can be identified using chemical tests like Fehling's solution which detects the presence of reducing
Biotransformation refers to the chemical alteration of substances within living organisms, typically involving enzymatic reactions. These reactions make compounds more water-soluble so they can be more easily excreted from the body. Biotransformation occurs in three phases - Phase I involves oxidation, reduction, and hydrolysis reactions; Phase II involves conjugating reactions like glucuronidation and sulfation; Phase III involves transport of conjugated compounds out of cells and organs. The liver is a major site of biotransformation, with cytochrome P450 enzymes and conjugating enzymes playing important roles in Phase I and Phase II reactions. Biotransformation is vital for the metabolism of drugs and other xenobiotics in the body.
Alcohols and ethers contain the C-O functional group. Alcohols have an O-H bond while ethers do not. The C-O bond in alcohols and ethers is inert to heterolytic cleavage but can undergo substitution reactions under acidic conditions via protonation of the oxygen. Ether chemistry follows similar mechanisms to alcohol chemistry involving C-O bond cleavage and substitution. Alcohols can act as weak acids via protonation of the O-H bond or as nucleophiles. Common reactions of alcohols include oxidation to form carbonyl compounds, conversion of the O-H to a better leaving group followed by substitution, and elimination reactions to form alkenes
Proteins are composed of amino acids linked together by peptide bonds to form polypeptide chains. There are 20 standard amino acids that make up proteins. Proteins have four levels of structure - primary, secondary, tertiary, and quaternary. The primary structure is the linear sequence of amino acids. Secondary structures form due to hydrogen bonding between amino acids and include alpha helices and beta sheets. Tertiary structure involves folding of secondary structures into a compact 3D structure. Hydrogen bonds, disulfide bridges, and hydrophobic interactions stabilize tertiary structure.
A look at epothilone A as it includes examples of many different forms of asymmetric synthesis. Also includes a little bit about ring-closing metathesis.
This document summarizes MacMillan's total synthesis of callipeltoside C, which employs organocatalysis and several interesting chemical transformations. The retrosynthesis splits the molecule into three fragments - the macrocyclic lactone core, carbohydrate, and a third segment prepared using organocatalysis. The forward synthesis couples these fragments in a convergent manner, with key steps including a Negishi carbometallation, organocatalytic hydroxylation, Semmelhack reaction to form the tetrahydropyran ring, and glycosidation to join the sugar moiety. The synthesis highlights the utility of retrosynthesis in simplifying complex targets and total synthesis in confirming the structure of natural products.
Gives an introduction to total synthesis and why we do it (which reminds me, I must add a picture of Everest, as I think the fact that 'it is there' is the main reason for most syntheses). Then to introduce the topic with a reasonably simple synthesis, we will look at an example of the synthesis of Tamiflu.
This document discusses organocatalysis, which uses small organic molecules rather than metals to catalyze chemical reactions. It notes the benefits of organocatalysis such as robust catalysts, new reaction types, and cleaner chemistry. Specific examples are provided of reactions catalyzed by proline, imidazolidinones, thioureas, and phosphoric acids. These catalysts form reactive intermediates like enamines and iminium ions to activate substrates for nucleophilic attack. Overall, organocatalysis is presented as a useful tool for synthetic chemists to address issues like solvent use, purification, and atom economy.
This is the biggy, the one everyone wants to achieve. Here we will be looking at metal-based chiral catalysis. We will concentrate on bisoxazoline-based Lewis acid catalysis and then look at reductions before finishing with the ubiquitous Sharpless epoxidation and dihydroxylation.
Use of stoichiometric amounts of a chiral source. The usual suspects will be discussed, including borane reagents (mostly pinene derivatives) and the Brown allylation.
Self explanatory really, this lecture looks at chiral auxiliaries. We will concentrate on oxazolidinones in alkylations, aldol reaction and the Diels-Alder reaction. There will be a couple examples of other auxiliaries.
1) The document discusses various methods of substrate control in organic reactions, focusing on how substrate conformation can influence diastereoselectivity. Allylic 1,3-strain (A1,3 strain), where substituents on the first and third carbons interact sterically, is a key concept.
2) Reactions like epoxidation and hydroboration are often highly diastereoselective when the substrate adopts a conformation that positions the smallest substituent syn to the reactive double bond to minimize A1,3 strain. The reagent then approaches from the least hindered face.
3) Directed reactions use hydrogen bonding or coordination to deliver the reagent to one
General introduction to the course followed by a basic introduction to asymmetric or stereoselective Synthesis. Then starting the course proper by looking at substrate control.
These slides are part of a talk to school teachers. They were designed to showcase some of the applications of organic chemistry, the range of natural and synthetic products. I'm not sure how much use it is without my commentary but, as always, it seems a waste to leave it on my hard drive. The second half gave a overview of chirality and stereoisomers as this topic often causes problems with students. This second half owes a lot to an excellent paper by Robert Gawley (J. Chem. Ed. 2005, 82, 1009) and just has prettier papers. This version of the talk includes a section I removed when presenting (due to time) on artificial sweeteners.
123.713A/B. Description of the Jacobsen synthesis of muconin. This is an example of total synthesis, retrosynthesis and asymmetric synthesis and shows the kind of information required in the assigment for this course.
This is an experiment. It is NOT a presentation. It is meant to be an interactive pdf for students to work through/revise from at their own pace. For these features to operate I guess it needs to be downloaded first.
It is based on 123.312 lectures on retrosynthesis or the design of chemical syntheses.
This document provides a summary of dienes and alkynes. It discusses resonance stabilization of conjugated dienes and their regioisomers when undergoing electrophilic addition. For alkynes, it covers their lack of acidity due to their sp hybridization and decreasing acid strength. It also summarizes the hydration of alkynes, which proceeds by a Markovnikov addition through a mercurinium ion intermediate and tautomerizes to the enol form.
The lecture discusses the mechanisms of ozonolysis and radical addition reactions to alkenes. Ozonolysis involves a three step mechanism where ozone cleaves the alkene to form an ozonide intermediate which then decomposes to a carbonyl compound. Radical addition reactions involve a three step chain reaction mechanism of initiation, propagation, and termination. The stability of radical intermediates is influenced by resonance stabilization, which explains why styrene reacts with HBr to give a single, benzylic bromide product.
This document summarizes reactions of alkenes including:
1. Addition of bromine to form bromonium ions and give anti-addition of bromine with stereospecificity.
2. Diol formation from epoxide ring opening, KMnO4 oxidation, and hydroboration-hydration which can give stereospecific or racemic mixtures.
3. Examples of biologically active natural products formed from alkene reactions like epothilones and dynemicin A.
The document summarizes key concepts about alkene reactions:
1) Markovnikov addition results in the addition occurring on the carbon with the most hydrogen substituents, giving the more substituted primary carbocation which is most stable.
2) Hydroboration follows anti-Markovnikov addition, with the BH3 group adding to the less substituted carbon. Oxidation then occurs with H2O2/NaOH through a 1,2-shift to give anti-Markovnikov addition.
3) Organoboranes are unstable and hydroboration involves coordination of BH3 to the alkene, allowing for stereospecific anti-Markovnikov addition
The document discusses the benefits of exercise for both physical and mental health. It notes that regular exercise can reduce the risk of diseases like heart disease and diabetes, improve mood, and reduce feelings of stress and anxiety. Staying active also helps maintain a healthy weight and keeps muscles, bones and joints healthy as we age.
The simplified electron and muon model, Oscillating Spacetime: The Foundation...RitikBhardwaj56
Discover the Simplified Electron and Muon Model: A New Wave-Based Approach to Understanding Particles delves into a groundbreaking theory that presents electrons and muons as rotating soliton waves within oscillating spacetime. Geared towards students, researchers, and science buffs, this book breaks down complex ideas into simple explanations. It covers topics such as electron waves, temporal dynamics, and the implications of this model on particle physics. With clear illustrations and easy-to-follow explanations, readers will gain a new outlook on the universe's fundamental nature.
This slide is special for master students (MIBS & MIFB) in UUM. Also useful for readers who are interested in the topic of contemporary Islamic banking.
it describes the bony anatomy including the femoral head , acetabulum, labrum . also discusses the capsule , ligaments . muscle that act on the hip joint and the range of motion are outlined. factors affecting hip joint stability and weight transmission through the joint are summarized.
How to Manage Your Lost Opportunities in Odoo 17 CRMCeline George
Odoo 17 CRM allows us to track why we lose sales opportunities with "Lost Reasons." This helps analyze our sales process and identify areas for improvement. Here's how to configure lost reasons in Odoo 17 CRM
Physiology and chemistry of skin and pigmentation, hairs, scalp, lips and nail, Cleansing cream, Lotions, Face powders, Face packs, Lipsticks, Bath products, soaps and baby product,
Preparation and standardization of the following : Tonic, Bleaches, Dentifrices and Mouth washes & Tooth Pastes, Cosmetics for Nails.
Macroeconomics- Movie Location
This will be used as part of your Personal Professional Portfolio once graded.
Objective:
Prepare a presentation or a paper using research, basic comparative analysis, data organization and application of economic information. You will make an informed assessment of an economic climate outside of the United States to accomplish an entertainment industry objective.
How to Fix the Import Error in the Odoo 17Celine George
An import error occurs when a program fails to import a module or library, disrupting its execution. In languages like Python, this issue arises when the specified module cannot be found or accessed, hindering the program's functionality. Resolving import errors is crucial for maintaining smooth software operation and uninterrupted development processes.
Thinking of getting a dog? Be aware that breeds like Pit Bulls, Rottweilers, and German Shepherds can be loyal and dangerous. Proper training and socialization are crucial to preventing aggressive behaviors. Ensure safety by understanding their needs and always supervising interactions. Stay safe, and enjoy your furry friends!
A review of the growth of the Israel Genealogy Research Association Database Collection for the last 12 months. Our collection is now passed the 3 million mark and still growing. See which archives have contributed the most. See the different types of records we have, and which years have had records added. You can also see what we have for the future.
Main Java[All of the Base Concepts}.docxadhitya5119
This is part 1 of my Java Learning Journey. This Contains Custom methods, classes, constructors, packages, multithreading , try- catch block, finally block and more.
A workshop hosted by the South African Journal of Science aimed at postgraduate students and early career researchers with little or no experience in writing and publishing journal articles.
Strategies for Effective Upskilling is a presentation by Chinwendu Peace in a Your Skill Boost Masterclass organisation by the Excellence Foundation for South Sudan on 08th and 09th June 2024 from 1 PM to 3 PM on each day.
How to Build a Module in Odoo 17 Using the Scaffold MethodCeline George
Odoo provides an option for creating a module by using a single line command. By using this command the user can make a whole structure of a module. It is very easy for a beginner to make a module. There is no need to make each file manually. This slide will show how to create a module using the scaffold method.
35. HO OH
HO
Pd2+
O O
Pd0
HO Pd2+
O
O OMe
MeOH O
Pd+
O
O Pd+
C O
Pd2+
O O O
O OMe O OMe O OMe
Pd2+ Pd+ OMe
MeOH
36. synthesis
OTBS
of middle section
CO2Me
O
H OMe
O
1. TBSCl
OH OTBS
2. DDQ
3. SO3•pyr,
O ....DMSO, Et3N
CO2Me
O OMe 80% O
H OMe H OMe
PMBO O
NC O
Cl
NC
OMe Cl
O
37. I
OTBS OTBS
OPMB
CO2Me
O
H OMe
BrMg
OTBS O
OPMB MgBr•Et2O
OH 98%
OH
MeO 16:1dr
O
H
O
OTBS
O
H OH
O O
MeO
Cl CO2Me
O
H OMe
synthesis HO OTBS
OPMB
callipeltoside C
38. I
OTBS OTBS
OPMB
CO2Me
O
H OMe
BrMg
OTBS O
OPMB MgBr•Et2O
OH 98%
OH
MeO 16:1dr
O
H
O
OTBS
O
H OH
O O
MeO
Cl CO2Me
O
H OMe
chelation HO OTBS
OPMB
control
39. synthesis MeO
OH
OH
callipeltoside C O
H
O
O
H OH
MeO O O
Cl
OTBS OTBS
1. MeOTf, base
2. DDQ
3. SO3•pyr,
CO2Me ....DMSO, Et3N CO2Me
O O
H OMe 84% H OMe
HO OTBS MeO OTBS
OPMB O
40. synthesis MeO
OH
OH
callipeltoside C O
H
O
O
H OH
MeO O O
OTBS
Cl
OTBS
CO2Me
O 1. HWE
H OMe 2. TBAF CO2H
3. Ba(OH)2 O
MeO OTBS H OMe
O 84% MeO OH
MeO Cl
MeO P
Cl
O
Org. Lett., 2001, 3, 503
41. synthesis
aglycone
OTBS OTBS
CO2H 2,4,6-Cl3C6H2COCl,
O iPr2NEt, DMAP O
H OMe H
MeO OH 83% MeO O O
Cl Cl
42. synthesis
aglycone
OTBS OH
1. PPh3•HBr, H2O
O 2. TFA O
H H OH
MeO O O 81% MeO O O
Cl Cl
46. synthesis of sugar MeO
OH
OH
HO O
O
N CO2H O OH
OTIPS H
O 75%
99%ee TIPSO OTIPS
OTIPS
see lecture six
47. synthesis of sugar MeO
OH
OH
HO O
OTES
OH
OMe
MgBr2•OEt2 MeO OTIPS
O OH
47%
>20:1dr HO O
TIPSO
TIPSO OTIPS
substrate
control
48. synthesis of sugar MeO
OH
OH
HO O
OTES
OH
OMe
MgBr2•OEt2 MeO OTIPS
O OH
47%
>20:1dr HO O
TIPSO
TIPSO OTIPS
substrate
control
49. TIPSO O OH
TIPSO R
R
MeO MeO H
HH H
H
TESO O
≡
OH
O OH OH
MeO OTIPS
HO O OMe OTIPSOTIPS
OTIPS
50. synthesis of sugar MeO
OH
OH
HO O
1. AcCl, BnOH
OH 2. PhOC(S)Cl
3. Bu3SnH, AIBN O
MeO OTIPS
4. DMP MeO OTIPS
HO O 47%
BnO O
TIPSO
Ac
A cO O Ac
O
I
O
O
51. synthesis of sugar
1. MeMgBr,
....MgBr2•OEt2
O OH
2. H2, Pd/C then
MeO OTIPS ....Cl3CCN MeO OTIPS
CCl3
86%
BnO O HN O O
52. endgame synthesis
callipeltoside C
OH
OH
MeO OH
MeO OTIPS
CCl3
OH
O O
HN O O
1. TMSOTf
2. TASF
O
H OH 63% O
H OH
MeO O O
MeO O O
Cl
Cl