This document describes a chemical extraction system controlled by an FPGA programmed using VHDL. The system extracts acetone from a water/acetone solution based on the different boiling points. The FPGA controls valves and monitors temperature and concentration sensors. A VHDL program was developed and divided into four parts to control the system. The program was synthesized and downloaded to the FPGA. The system successfully extracted 99% pure acetone by opening and closing valves based on sensor readings. FPGAs provide facilities to control systems in parallel, allowing control of many elements with minimal delay.