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GENOMIC AND cDNA LIBRARY
B. SC-III
SEMESTER-VI
Mr. Kailash S. Sontakke
Assistant Professor
Dept. of Botany, G.S.G.College, Umarkhed.
sontakke@gsgcollege.edu.in
GENOMIC LIBRARY
 A genomic library contains all the sequences present in the genome of
an organism.
 Genomic library. Gene bank or genomic library is a complete collection
of cloned DNA fragments which comprises the entire genome of an
organism
 The difference between both of these libraries is that genomic
library comprises DNA fragments which express the entire genome of an
organism while in cDNA library, mRNA is taken from particular cells of
an organism, and then cDNA consists of this mRNA in a reaction that is
catalyzed by an enzyme.
• In humans, approximately 25,000 genes exit among the 3
billion base pairs of DNA in the genome.
• To study anyone of these genes, a researcher first isolates
it from all of the other genes in an organisms DNA.
• One isolation method has a relatively long history and
involves the construction of a DNA library
• When a gene is identified and copied, it is said to have been
“cloned”
• The term “library” can refer to a population of organism,
each of which carries a DNA molecule inserted into a
cloning vector, or alternatively to the collection of all of the
cloned vector molecules.
• Collection of DNA fragments that have been cloned into
vectors so that researchers can identify and isolate the DNA
fragments that interest them for further study.
• For ease of purification, storage and analysis.
Genomic library (made
from genomicDNA)
DNA Library
cDNA Library
(made from cDNA- copyof mRNA)
FOR THE CONSTRUCTION OF LIBRARY
• Size of the gene
• Capacity of the vector
• Molecular tools
• Vectors
VECTORS FOR LIBRARY
STEPS FOR CONSTRUCTION OF GENOMIC
LIBRARY
• Isolation of DNA from cells
• Digestion into small fragments
• Introduction into suitable vectors
• Insertion into bacteria
• DNA isolation
• Collection of Genomic DNA library
SUMMARY OF GENOMIC
LIBRARY
CONSTRUCTION
USES OF GENOMIC LIBRARY
CDNA BANK OR CDNA LIBRARY.
DNA copy of an mRNA molecule is known as
copy DNA or cDNA (also called complementary
DNA).
 A cDNA library is a combination of cloned cDNA (complementary DNA)
fragments inserted into a collection of host cells, of which constitute some
portion of the transcriptome of the organism and are stored as a "library".
 cDNA is produced from fully transcribed mRNA found in the nucleus and
therefore contains only the expressed genes of an organism. Similarly,
tissue-specific cDNA libraries can be produced.
 In eukaryotic cells the mature mRNA is already spliced, hence the cDNA
produced lacks introns and can be readily expressed in a bacterial cell. While
information in cDNA libraries is a powerful and useful tool since gene
products are easily identified, the libraries lack information
about enhancers, introns, and other regulatory elements found in a genomic
DNA library.
STEPS IN CDNA LIBRARY
CONSTRUCTION
Isolation / Extraction of
mRNA
Construction of cDNA /
complementary DNA
STEPS IN cDNA
CONSTRUCTION.
APPLICATIONS AND USES OF CDNA
LIBRARY
Storage of reduced amount of information due to the removal
of non-coding regions.
cDNA can be directly expressed in prokaryotic organisms.
cDNA libraries are useful in reverse genetics where the
additional genomic information is of less use.
cDNA library is useful for isolating gene that codes for
particular mRNA.
THANK
YOU
THANK
YOU

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Genomic and c dna library by Kailash Sontakke

  • 1. GENOMIC AND cDNA LIBRARY B. SC-III SEMESTER-VI Mr. Kailash S. Sontakke Assistant Professor Dept. of Botany, G.S.G.College, Umarkhed. sontakke@gsgcollege.edu.in
  • 2. GENOMIC LIBRARY  A genomic library contains all the sequences present in the genome of an organism.  Genomic library. Gene bank or genomic library is a complete collection of cloned DNA fragments which comprises the entire genome of an organism  The difference between both of these libraries is that genomic library comprises DNA fragments which express the entire genome of an organism while in cDNA library, mRNA is taken from particular cells of an organism, and then cDNA consists of this mRNA in a reaction that is catalyzed by an enzyme.
  • 3. • In humans, approximately 25,000 genes exit among the 3 billion base pairs of DNA in the genome. • To study anyone of these genes, a researcher first isolates it from all of the other genes in an organisms DNA. • One isolation method has a relatively long history and involves the construction of a DNA library • When a gene is identified and copied, it is said to have been “cloned”
  • 4. • The term “library” can refer to a population of organism, each of which carries a DNA molecule inserted into a cloning vector, or alternatively to the collection of all of the cloned vector molecules. • Collection of DNA fragments that have been cloned into vectors so that researchers can identify and isolate the DNA fragments that interest them for further study. • For ease of purification, storage and analysis.
  • 5. Genomic library (made from genomicDNA) DNA Library cDNA Library (made from cDNA- copyof mRNA)
  • 6. FOR THE CONSTRUCTION OF LIBRARY • Size of the gene • Capacity of the vector • Molecular tools • Vectors
  • 8. STEPS FOR CONSTRUCTION OF GENOMIC LIBRARY • Isolation of DNA from cells • Digestion into small fragments • Introduction into suitable vectors • Insertion into bacteria • DNA isolation • Collection of Genomic DNA library
  • 10. USES OF GENOMIC LIBRARY
  • 11. CDNA BANK OR CDNA LIBRARY. DNA copy of an mRNA molecule is known as copy DNA or cDNA (also called complementary DNA).
  • 12.  A cDNA library is a combination of cloned cDNA (complementary DNA) fragments inserted into a collection of host cells, of which constitute some portion of the transcriptome of the organism and are stored as a "library".  cDNA is produced from fully transcribed mRNA found in the nucleus and therefore contains only the expressed genes of an organism. Similarly, tissue-specific cDNA libraries can be produced.  In eukaryotic cells the mature mRNA is already spliced, hence the cDNA produced lacks introns and can be readily expressed in a bacterial cell. While information in cDNA libraries is a powerful and useful tool since gene products are easily identified, the libraries lack information about enhancers, introns, and other regulatory elements found in a genomic DNA library.
  • 13. STEPS IN CDNA LIBRARY CONSTRUCTION Isolation / Extraction of mRNA Construction of cDNA / complementary DNA
  • 15. APPLICATIONS AND USES OF CDNA LIBRARY Storage of reduced amount of information due to the removal of non-coding regions. cDNA can be directly expressed in prokaryotic organisms. cDNA libraries are useful in reverse genetics where the additional genomic information is of less use. cDNA library is useful for isolating gene that codes for particular mRNA.