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Cells are constantly carrying out thousands of chemical
reactions needed to keep the cell, and your body as a
whole, alive and healthy. These chemical reactions are
often linked together in chains, or pathways. All of the
chemical reactions that take place inside of a cell are
collectively called the cell’s metabolism.
Overview of metabolism
Metabolic pathways can be broadly divided into two categories based on
their effects. Photosynthesis, which builds sugars out of smaller
molecules, is a "building up," or anabolic, pathway. In contrast, cellular
respiration breaks sugar down into smaller molecules and is a "breaking
down," or catabolic, pathway.
ATP
ATP
+
+
• Contains both catabolic and anabolic reactions.
• Catabolic – Energy from oxidation of acetyl CoA is stored in
reduced coenzymes.
• Anabolic – Several intermediates are precursors in
biosynthetic pathways
Krebs Cycle is Amphibolic
The citric acid cycle (Krebs cycle, Tricarboxylic acid cycle)
includes a series of oxidation-reduction reactions in
mitochondria that result in the oxidation of an acetyl group to
two molecules of carbon dioxide and reduce the coenzymes that
are reoxidized through the electron transport chain, linked to
the formation of ATP
An overview of TCA cycle
Citrate
Isocitrate
α
ketoglutarateSuccinyl CoA
Succinate
Fumarate
malate
Oxlaoacetate
Acetyl CoA
PyruvateCO2
Fatty acid
Cholesterol
Amino
Porphyrin
Isoleusine
methionine
valine
Odd chain fatty acid
Aspartate
phenylalanine
tyrosine
Glucose
Acids
• anabolic pathways (red arrows)
• anaplerotic reactions replenish depleted
cycle intermediates (dark green arrows).
• Catabolic – Energy from oxidation of
acetyl CoA is stored in reduced coenzymes.
• Anabolic – Several intermediates
are precursors in biosynthetic
pathways.
 Anaplerosis is a series of enzymatic reactions in which metabolic
intermediates enter the citric acid cycle from the cytosol.
 Cataplerosis is the opposite, a process where intermediates leave
the citric acid cycle and enter the cytosol. In muscle, anaplerosis is
important for increasing citric acid throughput during periods of
exercise.
Anaplerosis and Cataplerosis
• The reaction catalyzed by pyruvate carboxylase that replenishes
oxaloacetate to the TCA cycle is a good example of an anaplerotic, or
“filling up,” reaction.
• pyruvate+ CO2 + ATP +H2O → oxaloacetate + ADP + Pi + 2 H+
• This reaction assures that there is sufficient oxaloacetate for
condensation with acetyl CoA. In fact, acetyl CoA stimulates pyruvate
carboxylase.
• This reaction is most important, especially in liver and kidney.
There is some evidence that anaplerosis is required for a glucose-induced rise in
mitochondrial ATP production. Some amino acids (the building blocks of proteins)
enter and leave the citric acid cycle through anaplerosis and cataplerosis.
Reactions Enzymes Tissue /organism
Pyruvate +HCO3̄̄̄̄̄ + ATP Pyruvate carboxylase oxaloacetate + ADP+Pi Lever, kidney
Phosphoenolpyruvate+CO2+GDP PEP carboxylase oxaloacetate+GTP Heart, skeletal muscles
Phosphoenolpyruvate+HCO3 PEP carboxylase oxaloacetate+Pi Higher plant, yeast, bacteria
Pyruvate +HCO3 + NADPH malic enzyme malate+NADPH+ Eukaryotes and prokaryotes
Anaplerotic Reactions
 Protein may serve an excellent sources of nutrient energy
 Catabolism of amino acids provides: succinate, oxaloacetate, fumarate,
αketoglutarate.
 Pyruvate (from glycolysis) • acetyl CoA stimulates pyruvate carboxylase
Proteins can also be broken down to feed into the citric acid cycle and generate
energy
Under extreme starvation in animals or during senescence in plants
polypeptides are cleaved to amino acids, amino group is cleaved off of amino
acid forming an organic acid that can enter the citric acid cycle
Oxaloacetic
acid
Fumaric
acid Succinic
acid
α
ketoglutarate
Pyruvic
acid
Acetyl
CoA
Alanine, cysteine,
glycine, serine,
threonine, tryptophan
Tryptophan,
leucine, isoleucine
Arginine, Glutamine,
Histidine, Proline
Isoleucine,
methionine,
valine
Phenylalanine,
Tyrosine
Asparagine,
aspartate
NH3 Urea
NH3 Urea
NH3 Urea
NH3 Urea
NH3 Urea
NH3 Urea

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Amphibolic nature of kreb's cycle

  • 1.
  • 2. Cells are constantly carrying out thousands of chemical reactions needed to keep the cell, and your body as a whole, alive and healthy. These chemical reactions are often linked together in chains, or pathways. All of the chemical reactions that take place inside of a cell are collectively called the cell’s metabolism. Overview of metabolism
  • 3. Metabolic pathways can be broadly divided into two categories based on their effects. Photosynthesis, which builds sugars out of smaller molecules, is a "building up," or anabolic, pathway. In contrast, cellular respiration breaks sugar down into smaller molecules and is a "breaking down," or catabolic, pathway. ATP ATP + +
  • 4. • Contains both catabolic and anabolic reactions. • Catabolic – Energy from oxidation of acetyl CoA is stored in reduced coenzymes. • Anabolic – Several intermediates are precursors in biosynthetic pathways Krebs Cycle is Amphibolic
  • 5. The citric acid cycle (Krebs cycle, Tricarboxylic acid cycle) includes a series of oxidation-reduction reactions in mitochondria that result in the oxidation of an acetyl group to two molecules of carbon dioxide and reduce the coenzymes that are reoxidized through the electron transport chain, linked to the formation of ATP An overview of TCA cycle
  • 6. Citrate Isocitrate α ketoglutarateSuccinyl CoA Succinate Fumarate malate Oxlaoacetate Acetyl CoA PyruvateCO2 Fatty acid Cholesterol Amino Porphyrin Isoleusine methionine valine Odd chain fatty acid Aspartate phenylalanine tyrosine Glucose Acids • anabolic pathways (red arrows) • anaplerotic reactions replenish depleted cycle intermediates (dark green arrows). • Catabolic – Energy from oxidation of acetyl CoA is stored in reduced coenzymes. • Anabolic – Several intermediates are precursors in biosynthetic pathways.
  • 7.  Anaplerosis is a series of enzymatic reactions in which metabolic intermediates enter the citric acid cycle from the cytosol.  Cataplerosis is the opposite, a process where intermediates leave the citric acid cycle and enter the cytosol. In muscle, anaplerosis is important for increasing citric acid throughput during periods of exercise. Anaplerosis and Cataplerosis
  • 8. • The reaction catalyzed by pyruvate carboxylase that replenishes oxaloacetate to the TCA cycle is a good example of an anaplerotic, or “filling up,” reaction. • pyruvate+ CO2 + ATP +H2O → oxaloacetate + ADP + Pi + 2 H+ • This reaction assures that there is sufficient oxaloacetate for condensation with acetyl CoA. In fact, acetyl CoA stimulates pyruvate carboxylase. • This reaction is most important, especially in liver and kidney.
  • 9. There is some evidence that anaplerosis is required for a glucose-induced rise in mitochondrial ATP production. Some amino acids (the building blocks of proteins) enter and leave the citric acid cycle through anaplerosis and cataplerosis. Reactions Enzymes Tissue /organism Pyruvate +HCO3̄̄̄̄̄ + ATP Pyruvate carboxylase oxaloacetate + ADP+Pi Lever, kidney Phosphoenolpyruvate+CO2+GDP PEP carboxylase oxaloacetate+GTP Heart, skeletal muscles Phosphoenolpyruvate+HCO3 PEP carboxylase oxaloacetate+Pi Higher plant, yeast, bacteria Pyruvate +HCO3 + NADPH malic enzyme malate+NADPH+ Eukaryotes and prokaryotes Anaplerotic Reactions
  • 10.
  • 11.  Protein may serve an excellent sources of nutrient energy  Catabolism of amino acids provides: succinate, oxaloacetate, fumarate, αketoglutarate.  Pyruvate (from glycolysis) • acetyl CoA stimulates pyruvate carboxylase Proteins can also be broken down to feed into the citric acid cycle and generate energy Under extreme starvation in animals or during senescence in plants polypeptides are cleaved to amino acids, amino group is cleaved off of amino acid forming an organic acid that can enter the citric acid cycle
  • 12. Oxaloacetic acid Fumaric acid Succinic acid α ketoglutarate Pyruvic acid Acetyl CoA Alanine, cysteine, glycine, serine, threonine, tryptophan Tryptophan, leucine, isoleucine Arginine, Glutamine, Histidine, Proline Isoleucine, methionine, valine Phenylalanine, Tyrosine Asparagine, aspartate NH3 Urea NH3 Urea NH3 Urea NH3 Urea NH3 Urea NH3 Urea