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Making energy!

ATP
The point
is to make
ATP!
AP Biology

2008-2009
The energy needs of life
 Organisms are endergonic systems


What do we need energy for?
 synthesis
 building biomolecules
 reproduction
 movement
 active transport
 temperature regulation

AP Biology
Where do we get the energy from?
 Work of life is done by energy coupling


use exergonic (catabolic) reactions to
fuel endergonic (anabolic) reactions

digestion

+

synthesis

+
AP Biology

+

energy

+

energy
Living economy
 Fueling the body’s economy


eat high energy organic molecules
 food = carbohydrates, lipids, proteins, nucleic acids



break them down
 digest = catabolism



capture released energy in a form the cell can use

 Need an energy currency



AP Biology

a way to pass energy around
need a short term energy
storage molecule
Whoa!
Hot stuff!

ATP
ATP
 Adenosine TriPhosphate


modified nucleotide
 nucleotide =

adenine + ribose + Pi → AMP
 AMP + Pi → ADP
 ADP + Pi → ATP
 adding phosphates is endergonic
How efficient!
Build once,
use many ways

AP Biology

high energy bonds
How does ATP store energy?

AMP
ADP
ATP

I think
he’s a bit
unstable…
don’t you?

O– O– O– O – O–
–
O P –O– P –O––P O––O– P O–
OP
O O O O O

 Each negative PO4 more difficult to add


a lot of stored energy in each bond
 most energy stored in 3rd Pi
 3rd Pi is hardest group to keep bonded to molecule

 Bonding of negative Pi groups is unstable



spring-loaded
Pi groups “pop” off easily & release energy

AP Biology
Instability of its P bonds makes ATP an excellent energy donor
How does ATP transfer energy?

ATP
ADP

O– O– O–
–
O P –O– P –O– P O–
O O O

O–
–
O P O– +
O

7.3
energy

 ATP → ADP


releases energy
 ∆G = -7.3 kcal/mole

 Fuel other reactions
 Phosphorylation


released Pi can transfer to other molecules
 destabilizing the other molecules

AP Biology

enzyme that phosphorylates = “kinase”
An example of Phosphorylation…
 Building polymers from monomers
need to destabilize the monomers
 phosphorylate!


H
C
OH

+

H
C
HO

H
C It’s
never
OH that

+ ATP

simple!

H
C
AP Biology

+

P

H
C
HO

synthesis
+4.2 kcal/mol

“kinase”
enzyme
-7.3 kcal/mol

-3.1 kcal/mol

enzyme

H H
C C
O
H
C

P
H H
C C
O

H H
C C
HO
OH

+
+

H2O

ADP

+

Pi
Another example of Phosphorylation…

 The first steps of cellular respiration


beginning the breakdown of glucose to make ATP

Those
phosphates
sure make it
uncomfortable
around here!

glucose
C-C-C-C-C-C
hexokinase
phosphofructokinase

P
2 ATP

C
C

2 ADP

fructose-1,6bP
P-C-C-C-C-C-C-P

AP Biology

DHAP
P-C-C-C

G3P
C-C-C-P

H
C

P
activation
energy
ATP / ADP cycle
Can’t store ATP
cellular
 good energy donor,
not good energy storage respiration
 too reactive
transfers Pi too easily
 only short term energy
storage
 carbohydrates & fats are
long term energy storage
Whoa!
Pass me
the glucose
(and O2)!
AP Biology

ATP
7.3
kcal/mole

ADP + Pi
A working muscle recycles over
10 million ATPs per second
Cells spend a lot of time making ATP!

The
point is to make
ATP!
What’s the
point?

AP Biology
H+

ATP synthase

H+

 Enzyme channel in

H+

H+

H+
H

+

H+

H+

rotor

mitochondrial membrane



permeable to H+
H+ flow down
concentration gradient

rod

 flow like water over

water wheel
 flowing H+ cause
change in shape of
ATP synthase enzyme
 powers bonding of
Pi to ADP:

ADP + P
ATP

ADP + Pi → ATP

AP Biology How
But…

catalytic
head

is the proton (H+) gradient formed?

H+
That’s the rest
of my story!
Any Questions?

AP Biology

2008-2009

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32 ch09atp2008

  • 1. Making energy! ATP The point is to make ATP! AP Biology 2008-2009
  • 2. The energy needs of life  Organisms are endergonic systems  What do we need energy for?  synthesis  building biomolecules  reproduction  movement  active transport  temperature regulation AP Biology
  • 3. Where do we get the energy from?  Work of life is done by energy coupling  use exergonic (catabolic) reactions to fuel endergonic (anabolic) reactions digestion + synthesis + AP Biology + energy + energy
  • 4. Living economy  Fueling the body’s economy  eat high energy organic molecules  food = carbohydrates, lipids, proteins, nucleic acids  break them down  digest = catabolism  capture released energy in a form the cell can use  Need an energy currency   AP Biology a way to pass energy around need a short term energy storage molecule Whoa! Hot stuff! ATP
  • 5. ATP  Adenosine TriPhosphate  modified nucleotide  nucleotide = adenine + ribose + Pi → AMP  AMP + Pi → ADP  ADP + Pi → ATP  adding phosphates is endergonic How efficient! Build once, use many ways AP Biology high energy bonds
  • 6. How does ATP store energy? AMP ADP ATP I think he’s a bit unstable… don’t you? O– O– O– O – O– – O P –O– P –O––P O––O– P O– OP O O O O O  Each negative PO4 more difficult to add  a lot of stored energy in each bond  most energy stored in 3rd Pi  3rd Pi is hardest group to keep bonded to molecule  Bonding of negative Pi groups is unstable   spring-loaded Pi groups “pop” off easily & release energy AP Biology Instability of its P bonds makes ATP an excellent energy donor
  • 7. How does ATP transfer energy? ATP ADP O– O– O– – O P –O– P –O– P O– O O O O– – O P O– + O 7.3 energy  ATP → ADP  releases energy  ∆G = -7.3 kcal/mole  Fuel other reactions  Phosphorylation  released Pi can transfer to other molecules  destabilizing the other molecules AP Biology enzyme that phosphorylates = “kinase”
  • 8. An example of Phosphorylation…  Building polymers from monomers need to destabilize the monomers  phosphorylate!  H C OH + H C HO H C It’s never OH that + ATP simple! H C AP Biology + P H C HO synthesis +4.2 kcal/mol “kinase” enzyme -7.3 kcal/mol -3.1 kcal/mol enzyme H H C C O H C P H H C C O H H C C HO OH + + H2O ADP + Pi
  • 9. Another example of Phosphorylation…  The first steps of cellular respiration  beginning the breakdown of glucose to make ATP Those phosphates sure make it uncomfortable around here! glucose C-C-C-C-C-C hexokinase phosphofructokinase P 2 ATP C C 2 ADP fructose-1,6bP P-C-C-C-C-C-C-P AP Biology DHAP P-C-C-C G3P C-C-C-P H C P activation energy
  • 10. ATP / ADP cycle Can’t store ATP cellular  good energy donor, not good energy storage respiration  too reactive transfers Pi too easily  only short term energy storage  carbohydrates & fats are long term energy storage Whoa! Pass me the glucose (and O2)! AP Biology ATP 7.3 kcal/mole ADP + Pi A working muscle recycles over 10 million ATPs per second
  • 11. Cells spend a lot of time making ATP! The point is to make ATP! What’s the point? AP Biology
  • 12. H+ ATP synthase H+  Enzyme channel in H+ H+ H+ H + H+ H+ rotor mitochondrial membrane   permeable to H+ H+ flow down concentration gradient rod  flow like water over water wheel  flowing H+ cause change in shape of ATP synthase enzyme  powers bonding of Pi to ADP: ADP + P ATP ADP + Pi → ATP AP Biology How But… catalytic head is the proton (H+) gradient formed? H+
  • 13. That’s the rest of my story! Any Questions? AP Biology 2008-2009

Editor's Notes

  1. Which is to say… if you don’t eat, you die… because you run out of energy. The 2nd Law of Thermodynamics takes over!
  2. Marvel at the efficiency of biological systems! Build once = re-use over and over again. Start with a nucleotide and add phosphates to it to make this high energy molecule that drives the work of life. Let’s look at this molecule closer. Think about putting that Pi on the adenosine-ribose ==> EXERGONIC or ENDERGONIC?
  3. Not a happy molecule Add 1st PiKerplunk!Big negatively charged functional group Add 2nd Pi EASY or DIFFICULT to add?DIFFICULT takes energy to add = same charges repel Is it STABLE or UNSTABLE?UNSTABLE = 2 negatively charged functional groups not strongly bonded to each otherSo if it releases Pi  releases ENERGY Add 3rd PiMORE or LESS UNSTABLE?MORE = like an unstable currency • Hot stuff! • Doesn’t stick around • Can’t store it up • Dangerous to store = wants to give its Pi to anything
  4. How does ATP transfer energy? By phosphorylating Think of the 3rd Pi as the bad boyfriend ATP tries to dump off on someone else = phosphorylating How does phosphorylating provide energy? Pi is very electronegative. Got lots of OXYGEN!! OXYGEN is very electronegative. Steals e’s from other atoms in the molecule it is bonded to. As e’s fall to electronegative atom, they release energy. Makes the other molecule “unhappy” = unstable. Starts looking for a better partner to bond to. Pi is again the bad boyfriend you want to dump. You’ve got to find someone else to give him away to. You give him away and then bond with someone new that makes you happier (monomers get together). Eventually the bad boyfriend gets dumped and goes off alone into the cytoplasm as a free agent = free Pi.
  5. Monomers  polymers Not that simple! H2O doesn’t just come off on its own You have to pull it off by phosphorylating monomers. Polymerization reactions (dehydration synthesis) involve a phosphorylation step! Where does the Pi come from? ATP
  6. These are the very first steps in respiration — making ATP from glucose. Fructose-1,6-bisphosphate (F1,6bP) Dihydroxyacetone phosphate (DHAP) Glyceraldehyde-3-phosphate (G3P) 1st ATP used is like a match to light a fire… initiation energy / activation energy. The Pi makes destabilizes the glucose & gets it ready to split.