This document discusses unreduced gamete formation and its role in plant breeding. It begins with an introduction and overview of unreduced gametes, also called 2n gametes, which have the same chromosome number as the parent plant. It then covers sources and mechanisms of 2n gamete formation, including interspecific hybrids, meiotic mutants, and odd polyploids. The mechanisms of 2n gamete formation through mitosis and various types of meiotic restitution are explained. Detection methods and factors that influence 2n gamete frequency are outlined. The role of 2n gametes in plant breeding applications such as ploidy level manipulation, inter-genomic recombination, and development of new crop varieties is then
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Gene–environment interaction is when two different genotypes respond to environmental variation in different ways. Stability refers to the performance with respective to environmental factors overtime within given location. Selection for stability is not possible until a biometrical model with suitable parameters is available to provide criteria necessary to rank varieties / breeds for stability. Different models of stability are discussed.
Stability analysis and G*E interactions in plantsRachana Bagudam
Gene–environment interaction is when two different genotypes respond to environmental variation in different ways. Stability refers to the performance with respective to environmental factors overtime within given location. Selection for stability is not possible until a biometrical model with suitable parameters is available to provide criteria necessary to rank varieties / breeds for stability. Different models of stability are discussed.
Heterotic group “is a group of related or unrelated genotypes from the same or different populations, which display similar combining ability and heterotic response when crossed with genotypes from other genetically distinct germplasm groups.”
Definition of Heterosis
Dominant hypothesis
Over dominance
Epistasis Hypothesis
Features of heterosis
Application and Factors affecting Hererosis are explained with example for each. Objections raised for all the hypothesis are given in simple words.
Definition of hybrid vigour and heterosis are also explained.
Power Point is deals with the different aspects of Quantitative genetics in plant breeding it converse Basic Principles of Biometrical Genetics, estimation of Variability, Correlation, Principal Component Analysis, Path analysis, Different Matting design and Stability so on
Heterotic group “is a group of related or unrelated genotypes from the same or different populations, which display similar combining ability and heterotic response when crossed with genotypes from other genetically distinct germplasm groups.”
Definition of Heterosis
Dominant hypothesis
Over dominance
Epistasis Hypothesis
Features of heterosis
Application and Factors affecting Hererosis are explained with example for each. Objections raised for all the hypothesis are given in simple words.
Definition of hybrid vigour and heterosis are also explained.
Power Point is deals with the different aspects of Quantitative genetics in plant breeding it converse Basic Principles of Biometrical Genetics, estimation of Variability, Correlation, Principal Component Analysis, Path analysis, Different Matting design and Stability so on
Haploids and Double haploids are having considerable importance in plant breeding and genetics. Also, the production of haploids through conventional breeding methods is long term efforts. therefore many scientists investigated the production of haploids through anther culture.
The production of haploid plants exploiting the totipotency of microspore.
Androgenesis is the in vitro development of haploid plants originating from totipotent pollen grains through a series of cell division and differentiation.
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Strategies for improving the growth and development of crop species have been investigated for many years. Seed priming is a pre-sowing strategy for influencing seedling development by modulating pre-germination metabolic activity prior to emergence of the radicle and generally en¬hances germination rate and plant performance. During priming, seeds are partially hydrated so that pre-germinative metabolic ac¬tivities proceed, while radicle protrusion is prevented, then are dried back to the original moisture level. Common priming techniques include osmopriming, halopriming, hormopriming and hydropriming. Hydropriming and osmopriming contribute to significant improvement in seed germination and seedling growth in different plant species. Production of H2O2 during the early imbibitions period has been demonstrated; ROS produced after imbibition are assumed to play a role in seed germination. Thus, these reports suggest that ROS might play a signaling role in seed germination and dormancy. Although several lines of evidence indicate that ROS affect seed germination, there is little information establishing a direct link between the change in levels of ROS anti-oxidative activities and priming.
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Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
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6. An unreduced gamete has the same chromosome
number as the plant that produced it i.e., 2n
They are also called 2n gamets or diplogametes
It is genetically controlled and results of modification
of meiotic process
Contributed little to the origin of polyploids
Unreduced gametes
6
7. Sources of 2n gametes
Interspecific hybrids: both 2n egg and pollen are produced
simultaneously by the same hybrid. but, neither of two
parents of the F1 hybrid nor their F2 sexual polyploidy
progenies can produce 2n gamets.
Ex: Lilium ( Barba-Gonzalez et al., 2005)
Wheat (Xu & Joppa, 2000; Zhang et al., 2010)
Citrus (Chen et al., 2008)
7
8. Meiotic mutants
A mutant active gene in meiosis
2n pollen can formed independent from 2n egg cells and
vice versa.
Ex: Potato (Jongedijk et al., 1991; Peloquin et al., 1999),
Red clover (Parrot & Smith, 1984),
Alfalfa (Barcaccia et al., 2003),
Wheat (Jauhar, 2003; Roberts et al., 1999)
Arabidopsis (d’ Erfurth et al., 2008; Yang et al., 1999)
8
9. Odd polyploids :
Crosses with triploids (gametes can be 1x, 2x or 3x) result
in higher ploidy levels of the progeny and mostly act as a
bridge between diploids and tetraploids
(Kohler, et al., 2010) 9
10. Mechanisms of 2n gamete formation
Mitotic mechanism:
Somatic doubling, either obtained spontaneously or by the
application of chemicals at zygotic, embryonic or
meristematic stage of a plants life cycle.
This will ultimately lead to the production of polyploid tissues
and possibly the generation of polyploid offsprings.
Ex: Citrus Frequency of polyploids in citrus cultivars
(Usman , et al., 2006) 10
11. Meiotic mechanisms:
Most commonly arise through meiotic defects
Abnormal meiotic processes resulting in gametes that
have the same chromosome number as that of parent
plant
This is mainly due to Meiotic Nuclear Restitution (MNR)
11
12. 1. First division restitution (FDR)
2. Second division restitution (SDR)
3. Indeterminate meiotic restitution (IMR)
4. Post meiotic restitution (PMR)
Other cytological aspects-
FDR and SDR
Cytomixis
Pre-meiotic doubling
4 types-
12
15. Indeterminate meiotic restitution (IMR)
Display a mixture of FDR and SDR.
Failure of chromosome pairing
A part sister chromosome move to the same daughter cell.
The parental genomes are present in odd numbers.
15
17. Cytological aspects:
Other than FDR and SDR-
Cytomixis : chromatin from the nucleus extrudes to
cytoplasm of adjacent mother cell through cytoplasmic
connections (Sheidai et al., 2006) .
Pre- meiotic doubling: before meiosis
a doubling of the chromosomes occur
(Woogenvoort et al., 1990).
17
18. Genes involved in 2n gamete formation
1. SWI1/DYAD
2. CYCA1;2/TAM
3. OSD1
4. AtPS1
5. dif1-1
6. PS- potato
7. el - maize
A. thaliana
18
20. (A) Metaphase I
(B) dif1-1
(C) swi1-2
(D,E) swi1-2/dif1-1 double
mutant meiocytes.
(D) Sister chromatid cohesion is
lost at the end of prophase I.
(E) The resulting 20 free
chromatids at metaphaseI.
(F) Some cells contained 10
condensed univalents.
(Mercier et al., 2003) 20
21. Frequency of unreduced gamete production
(Number of individuals producing 2n gametes/total number of individuals examined)
(Bretagnolle and Thompson, 1995) 21
22. Factors affecting frequency of unreduced gamete
production
Stimulated by environmental factors such as temperature,
wounding, water and nutrient stress……
Formation of giant pollen in Brassica inter specific hybrids
more viable than normal.
frequency is high under cold temperatures
these are two times greater than parents in terms of
magnitude
22
23. (Mason et al.,2011)
Male unreduced gamete production in Brassica
species under different temperatures
23
26. Detection of 2n gametes
1. Pollen morphology
2. Flow cytometry
3. Analysis of sporogenesis
4. Ploidy analysis of the progeny
26
27. Pollen Morphology
• Banana, rose (Rosa) and sweet
potato 30% larger
• Chinis jujube (Ziziphus jujube) 1.5
times larger
(Xue et al., 2011)
Search for large pollen in the
population
27
29. FLOW CYTOMETRY
Direct quantification of pollen
nuclear DNA
-practiced in Lilly, tobacco, maize
and in rape –Pan et al., 2004
Compares the DNA content of
pollen nuclei to the DNA content
of somatic leaf tissue.
29
31. • Complex outer exine layer on the pollen surface is the main
obstacle in releasing the nuclei from pollen.
Bohne et al., 2003
Difficulties and solutions
• Bead beating
Roberts, 2007
• Chopping of pollen grains
Laere et al., 2009
• Nuclear isolation protocol which only releases nuclei from
germination tubes
Dewitte et al. (2006, 2009)
31
32. Alternative method to confirm the presence of 2n pollen
Analysis of microsporogenesis
Provide insight in the mechanisms (FDR, SDR) behind 2n
gamete formation.
Molecular cytological techniques like GISH, FISH or AFLP
markers can be used
Draw back: does not provide any information about pollen
viability.
32
33. Ploidy analysis of the progeny
Chromosome counting method
Flow cytometry
33
38. Trifluralin treatment
• Induced 2n pollen by submerging flower buds of Begonia in
a trifluralin solution.
Dewitte et al. (2010)
• Spraying maize tassels with a trifluralin solution before
flowering
Kato, (1999)
• Induction of both 2n pollen and 2n egg cells
38
40. Hibiscus syriacus Hibiscus paramutabilis
Interspecific hybridisation
All are tetraploids
50% are hexaploids
(Van Laere et al., 2009) 40
41. Tools to engineer 2n gamete formation
Isolation of genes involved in 2n gamete production
Site-directed mutagenesis
Ethyl methane sulphonate (EMS)
Random insertional mutagenesis or irradiation of seeds or
buds
41
42. ROLE OF 2n GAMETES IN PLANT BREEDING
Polyploids that originate through the functioning of 2n gametes
(Peloquin, et al., 1999) 42
46. Use of 2n gametes in potato germplasm introgression
(Carputo, et al., 2000) 46
47. AA
CCBB
AABB AACC
BBCC
B. rapa
B. oleraceaB. nigra
B. juncea B. napus
B. carinata
AABBCC
Super Brassica
Breeding “Super Brassica” cultivars
(Yan and Shyama , 2007) 47
48. B. napus
(AnAnCnCn)
X B. carinata
(BcaBcaCcaCca)
AnCn
BcaCcaGametes:
AnBcaCcaCn
Unbalanced tetraploid
X B. juncea (AjAjBjBj)
Gametes: AnBcaCcaCn AjBj
Unreduced gametes
AnAjBjBcaCcaCn
allohexaploids
(Yan and Shyama , 2007) 48
As different genes are active with in the micro- or macro- sporogenesis.
might disturb during spindle formation or cytokinesis resulting in 2n gamets.
Meiotic restitution mechanisms in A. tequilana and A. angustifolia.
1 in that way mother cell start meiosis with double amount of chromosomes (4x) resulting in unreduced gametes (2x).
2 this can takes place in pre meiotic mitosis due to failure in spindle formation
1. protein is required in prophase I where it has roles in sister chromatid cohesion and recombination. A lack of SWI1/DYAD can result in an equational division involving the separation of sister chromatids at meiosis I
and no further progression in female meiosis.
2. Supress the meiosis 2
2n egg formation is under the control of the el allele (Rhoades and Dempsey, 1966)
3. protein required for meiosis II entry
6. extensive chromosome fragmentation during meiosis
1in a wild-type male meiocyte. Five bivalents are observed.
2meiocyte exhibiting chromosome fragmentation.
3meiocyte at the end of prophase. Twenty chromatids are observed.
The presence of large pollen only indicates the presence of 2n pollen
but does not present proof of doubled DNA content. Another disadvantage of this screening
technique is the broad overlap in size distribution between small and large pollen in some
genera such as grasses.
use of molecular cytological techniques (genomic in situ
hybridization, GISH or fluorescent in situ hybridization, FISH) or marker analysis (such as
amplified fragment length polymorphism, AFLP) on meiocytes or polyploid progenymay
provide more accurate or additional information on the mechanisms behind 2n gamete
formation
major drawback to use 2n gametes in plant breeding is that only a minority of genotypes regularly produce 2n gametes
Size distribution, appearance, and flow cytometry histograms of pollen grains in diploid cultivars. two peaks corresponding to 1C and 2C DNA content because the binucleate-type lily pollen contains one 2C generative and one 1C vegetative cell (Fig. 1G). In contrast, the N2O-induced pollen gave rise to peaks at 1C, 2C and additional 4C levels, indicating both n and 2n pollen (Fig. 1H).
Overcoming hybrid sterility by treating sterile or partially sterile hybrid lilies with N2O for 48 h.
N2O treatment is also expected to restore the fertility of interspecific hybrids through meiotic restitution or mitotic amphidiploidization.
it is unknown how N2O treatment restores fertility in sterile hybrids.
. As such, the generative nucleus was mitotically arrested and viable bicellular pollen was obtained
disturbed meiosis resulted in the production of dyads and triads which mainly resulted from spindle misorientations in
meiosis II.
There was a clear indication that N2O had induced restitution gametes in these cases but not chromosome doubling in pre-meiotic stages
Recombination among the parental genomes was present and as a result there is an enormous variation among the progenyDue to autosyndetic pairing there is no variation among the progeny