This document describes speed breeding, a technique that uses controlled growing conditions like extended photoperiod and precise temperature and humidity to rapidly advance plant generations. It allows generating up to 6 wheat generations per year. Case studies show speed breeding reduced time to flowering for several crops by half compared to normal glasshouse conditions. Speed breeding provides opportunities to combine with genomic selection and genome editing to accelerate crop improvement. Challenges include different crop responses and initial investment costs, but it can significantly shorten breeding cycles.
Speed Breeding and its implications in crop improvementANILKUMARDASH2
Introduction
History of speed breeding
Methods of speed breeding
Advantages over conventional breeding
Integration with various technologies
Case studies
Opportunities and challenges
Conclusions
Speed Breeding is new technology to develop plants or breeding materials within a short possible time without affect seed viability and yield performance.
Multiple inbred founder lines are inter-mated for several generations prior to creating inbred lines, resulting in a diverse population whose genomes are fine scale mosaics of contributions from all founders.
Speed Breeding and its implications in crop improvementANILKUMARDASH2
Introduction
History of speed breeding
Methods of speed breeding
Advantages over conventional breeding
Integration with various technologies
Case studies
Opportunities and challenges
Conclusions
Speed Breeding is new technology to develop plants or breeding materials within a short possible time without affect seed viability and yield performance.
Multiple inbred founder lines are inter-mated for several generations prior to creating inbred lines, resulting in a diverse population whose genomes are fine scale mosaics of contributions from all founders.
1. STABILITY OF MALE STERILE LINES - ENVIRONMENTAL INFLUENCE ON STERILITY - EGMS - TYPES AND INFLUENCE ON THEIR EXPRESSION, GENETIC STUDIES.
2. PHOTO SENSITIVE GENETIC MALE STERILITY AND ITS USES IN HETEROSIS BREEDING
3. TEMPERATURE SENSITIVE GENETIC MALE STERILITY AND ITS USES IN HETEROSIS BREEDING
Description of the rapid generation advance (RGA) system used at the International Rice Research Institute (IRRI) from 2012 to 2017. A paper was published in the Plant Production Science journal last November 2017. (Article link: https://www.tandfonline.com/doi/full/10.1080/1343943X.2017.1391705)
Stability analysis and G*E interactions in plantsRachana Bagudam
Gene–environment interaction is when two different genotypes respond to environmental variation in different ways. Stability refers to the performance with respective to environmental factors overtime within given location. Selection for stability is not possible until a biometrical model with suitable parameters is available to provide criteria necessary to rank varieties / breeds for stability. Different models of stability are discussed.
Inability of flowering plants to produce functional pollen.
Male sterility is agronomically important for the hybrid seed production.
Onion crop provides one of the rare examples of very early recognition of male sterility cultivar Italian Red (Jones and Emsweller 1936)
Its inheritance and use in hybrid seed production (Jones
and Clarke 1943).
Since then male sterility is reported in a fairly large number of crops including vegetables.
New breeding tool i.e. speed breeding (indoor plant breeding technique)to enhance the life cycle of crop. The concept involves exposing plants to an inordinate amount of light in a close green house environment in an efforts to speed up the growing process and produce new generation of seeds in a much quicker fashion
1. STABILITY OF MALE STERILE LINES - ENVIRONMENTAL INFLUENCE ON STERILITY - EGMS - TYPES AND INFLUENCE ON THEIR EXPRESSION, GENETIC STUDIES.
2. PHOTO SENSITIVE GENETIC MALE STERILITY AND ITS USES IN HETEROSIS BREEDING
3. TEMPERATURE SENSITIVE GENETIC MALE STERILITY AND ITS USES IN HETEROSIS BREEDING
Description of the rapid generation advance (RGA) system used at the International Rice Research Institute (IRRI) from 2012 to 2017. A paper was published in the Plant Production Science journal last November 2017. (Article link: https://www.tandfonline.com/doi/full/10.1080/1343943X.2017.1391705)
Stability analysis and G*E interactions in plantsRachana Bagudam
Gene–environment interaction is when two different genotypes respond to environmental variation in different ways. Stability refers to the performance with respective to environmental factors overtime within given location. Selection for stability is not possible until a biometrical model with suitable parameters is available to provide criteria necessary to rank varieties / breeds for stability. Different models of stability are discussed.
Inability of flowering plants to produce functional pollen.
Male sterility is agronomically important for the hybrid seed production.
Onion crop provides one of the rare examples of very early recognition of male sterility cultivar Italian Red (Jones and Emsweller 1936)
Its inheritance and use in hybrid seed production (Jones
and Clarke 1943).
Since then male sterility is reported in a fairly large number of crops including vegetables.
New breeding tool i.e. speed breeding (indoor plant breeding technique)to enhance the life cycle of crop. The concept involves exposing plants to an inordinate amount of light in a close green house environment in an efforts to speed up the growing process and produce new generation of seeds in a much quicker fashion
Length of generation time is key hurdle in development of new variety. Speed breeding reduce generation time and make available new varieties earlier to feed billions of population.
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Despite their many benefits, productivity of legumes in sub-Saharan Africa (SSA) is generally lower than world averages due to:Biotic stresses (diseases, pests, weeds), Abiotic stresses (heat, frost, drought, and salinity) and Edaphic factors (associated with soil nutrient.
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Breeding for Development of Climate Resilient Chickpea.pptxKanshouwaModunshim
The breeding for the development of Climate Resilient Chickpea is a critical initiative aimed at enhancing the productivity and adaptability of chickpea genotypes under challenging environmental conditions. Chickpea, a vital pulse crop globally, faces yield limitations due to the combined impact of heat, cold, drought, and salinity stresses. The average yields, currently far below the potential, necessitate the development of highly productive and resilient chickpea cultivars. Traditional breeding methods and modern genomic resources, including molecular markers, genetic maps, and QTL identification, have been instrumental in enhancing grain yields and stress adaptation. Marker-assisted backcrossing has successfully produced cultivars like Pusa Manav, demonstrating the effectiveness of genomic technologies. Additionally, the adoption of gene-editing technologies, such as CRISPR-Cas9, holds promise in accelerating genetic gain for stress-related traits.
Pulses R & D in India by Dr. S K Datta, Deputy Director General, Indian Council of Agricultural Research. Presentation at The Pulses Conclave 2014 by India Pulse & Grains Association, IPGA
The production of haploid plants exploiting the totipotency of microspore.
Androgenesis is the in vitro development of haploid plants originating from totipotent pollen grains through a series of cell division and differentiation.
Abstract
Potato is an important food and cash crop in Eastern Ethiopia; however, its productivity is low for a number of constraints. Shortage of quality planting material and poor tuber sprouting due to long dormancy period of improved varieties at planting are two of the factors known to affect production cycle and productivity of the crop in Eastern Ethiopia. Two separate experiments were conducted from November 2013 to June 2014, to assess the effect of Gibberellic acid and storage condition on seed tuber dormancy breakage of two potato varieties. The treatments in the first experiment consisted of two potato varieties (‘Bubu’ and ‘Bate’) and three levels of Gibberellic acid (GA3) (0, 10, and 20 ppm) kept under three storage methods: in diffused light store (DLS), in pit, and in farmyard manure (FYM) heap. The experiment was laid out as a randomised complete design with four replications and conducted in the horticulture laboratory of Haramaya University. The second experiment consisted of the same treatments laid out in the field to study the effects of the treatments on the subsequent growth, yield, and yield-related traits. The experiment was laid out in a randomised complete block design with three replications and conducted on a farmer’s field. The results of the experiments showed that genotypes, exogenous application of GA3, and storage conditions, as well as the interaction between them, significantly affected seed tuber dormancy period, sprouting characteristics, and subsequent tuber yield. Dormancy period, sprouting percent, sprout length, length of lateral axillary sprouts, and sprout vigour were significantly affected by the treatments. However, parameters such as days to 50% emergence, days to 50% flowering, and number and weight of very small and small tubers showed highest values for seed tubers, either treated with GA3 or not, and stored under FYM heap and pit storage conditions when compared with tuber treated and stored in DLS. In general, the study indicated that the interaction between genotypes, exogenous application of GA3, and storage conditions resulted in early dormancy termination, early emergence of shoots, and high marketable tuber yield.
Gemeda Mustefa
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6. 6
Accelerated Breeding
Non molecular
Breeding method
Rapid
Generation
Advanceme
nt
Double
d
Haploid
y
Shuttle
Breedin
g
Speed
Breedi
ng
Molecular Breeding
Method
Marker
Assisted
BC
Genomi
c
Selectio
n
8. 1) Marker Assisted Backcrossing
8
MAS leads to improved
accuracy, cost or time saving,
fast screening and detection of
homozygosity
MABC permits highly
efficient detection of target
gene or QTL, along with
combining multiple genes into
single recipient i.e. Marker
assisted pyramiding
BC2
P1 x F1
P1 x P2
BC1
Use ‘background’ markers to select plants that have most
recurrent parent genome and smallest % of donor
genome
9. 2) Genomic Selection
9
Complementary method to MAS based on making
genomic predictions from a large number of DNA
markers rather than focusing on specific gene
Accurate selection of complex traits such as yield
and to shorten breeding cycle to increase genetic
gain
11. 1) Rapid Generation Advancement
11
Enables quick line fixation by manipulating growth
conditions of plants such as flowering and seed set
RGA is superior to other breeding methods in speed,
technical simplicity, less resource requirement and low
cost
This shortened the variety development time and
breeding cycle by about 2 years
12. 2)Traditional Inbreeding & Shuttle Breeding
• One generation per year
• Crossing to F6 takes 7 years
• Two generations per year
• Crossing to F6 takes 3.5 year
12
13. Shuttle Breeding
13
Different field locations permits off season
breeding activities
Improved selection, because field locations
contrasted for a broad range of diseases and
environmental conditions
17. First DH wheat variety of the country HIM
PRATHAM (DH-114)
17
Features of Him Pratham
Pedigree VWFW 452 ×WW 24
Semi Dwarf and Awned
Protein & Gluten: 12.79 & 7.81%
Facultative winter wheat
Spreading early growth
Av. Grain yield: 37-40q/ha
1000 grain weight: 48gm
Bold, hard & amber grains
Sowing time: Oct- Nov
Recommended fir dry & wet
temperate regions of N-W Himalayas
Developed by: Dr. HK Chaudhary
18. What is Speed Breeding?
A technique which involves extending
photoperiod and controlled growing
conditions such as temperature, soil media,
spacing etc. in glasshouses, enabling rapid
generation advancement by shortening the
breeding cycle.
18
20. Inspired by NASA aiming to grow wheat and food crops in
Space
Started from University of Queensland, John Innes Centre
and University of Sydney in Australia by Dr. Lee Hickey
and co- workers in wheat and peanut
20
30. 1st wheat variety DS Faraday using Speed Breeding; High
protein, milling wheat tolerant to Pre Harvest Sprouting
30
31. Speed Breeding Setup
Light : PAR region (400-700 nm), ambient lighting with
LED
Photoperiod : 22 hours with 2 hours of darkness
Temperature : 22˚ C/ 17 ˚C for 22 hours light and 2 hours
dark
Humidity : Ideally 60-70%
31
32. Equipment setup
32
Benchtop growth cabinet
Hardware
Cabinet structure
Lighting system
Temperature and humidity system
Software installation and setup
33. Procedure
33
Preparing seed for sowing
Monitoring key growth stages,
parameters and phenotyping
Seed harvesting
Monitoring energy use
36. 36
Method
Standard genotypes of spring wheat, durum wheat, barley and
Brachypodium distachyon were grown in controlled environmental
conditions with extended photoperiod and compared with glasshouse
with no supplementary light and heating.
Results
Plants grown under SB progressed to anthesis in approximately half
the time those from glass house conditions
37. 37
Fig: a) Loss of function of awn suppressor B1 locus in T. aestivum cv. paragon
b) Reduced height (Rht) dwarfing gene (T. aestivum cv. maringa wild
type, maringa Rht-1, maringa Rht-3 from left to right)
38. 38
Figure:
a) T. aestivum cv. cadenza
at 38 days post sowing
b) Hordeum vulgare cv.
braemar at 41 days post
sowing
c) B. distachyon 36 days
post sowing
d) B. napus cv. Bravo at
50 days post sowing
e) C. arietinum cv.
jimbour at 35 days post
sowing
d e
41. Results
41
Different SB protocols were introduced for several crop
species viz. Spring wheat, durum wheat, barley, oats,
brassica species, chickpea, pea, linseed, quinoa and model
grass Brachypodium distachyon
Protocol describes the growing conditions, soil media
composition, lighting, temperature and spacing which
promote growth in different crops
43. Results
43
A procedure in which, by combining embryo culture with
management of watering regimes, lighting intensity and
duration, temperature and quantity of potting mixture,
allows the production of upto eight generation of wheat and
nine generations of barley per annum.
45. Speed Breeding Genomic Selection
Accelerate transgenic
Opportunity to combine it with CRISPR-Cas9
genome editing technique
Plant phenotyping for traits: flowering time, plant
height, disease resistance, pod shattering etc.
45
46. Challenges & Limitations
Different responses of different plant species when exposed
to extended photoperiod
Early harvest of immature seed interfere with phenotyping
of some seed traits
Initial investment is high
No universal protocol due to diverse response of plant
species to photoperiod
46
47. Implications in Crop Improvement
Six generations per year for spring wheat(Triticum
aestivum), durum wheat (T. durum), barley (Hordeum
vulgare), chickpea (Cicer arietinum )and pea (Pisum
sativum)
Commercial peanut breeding program
Multiple disease resistance in barley (Hordeum vulgare)
Multiple quantitative traits in durum wheat (T. durum)
Physiological traits viz. awn morphology, flowering time,
plant height etc.
Mutant transformation i.e. waxy less mutant in barley
47
48. Accelerated Breeding can contribute to hasten the plant
growth to accelerate research and development by
reducing breeding cycles. Moreover, SB as a platform can
combine with several other technologies to get the end
result faster. With the success in SB particularly in wheat
crop, India can also initiate such facilities for quick
development of new varieties.
48
Conclusion