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1.1. The structure of DNA andThe structure of DNA and
RNARNA
2.2. Gene StructureGene Structure
3.3. Gene TheoryGene Theory
4.4. Biosynthesis of proteinBiosynthesis of protein
 1866: Gregor Mendel publishes Experiments in Plant Hybridization,
which lays out the basic theory of genetics. It is widely ignored until
1900.
 1871: Friedrich Miescher isolates “nucleic acid” from pus cells.
 1910: Thomas Hunt Morgan proves that genes are located on the
chromosomes (using Drosophila).
 1953: James Watson and Francis Crick determine the structure of
the DNA molecule, which leads directly to knowledge of how it
replicates
 1966: Marshall Nirenberg solves the genetic code, showing that 3
DNA bases code for one amino acid.
 1972: Stanley Cohen and Herbert Boyer combine DNA from two
different species in vitro, then transform it into bacterial cells: first
DNA cloning.
 2001: Sequence of the entire human genome is announced.
The structure of DNA and RNA
 Genetic material of living organisms is either DNA or
RNA.
 DNA – Deoxyribonucleic acid
 RNA – Ribonucleic acid
 Genes are lengths of DNA that code for particular
proteins.
DNA and RNA are polynucleotides
 Both DNA and RNA are polynucleotides.
 They are made up of smaller molecules called
nucleotides.
 DNA is made of two polynucleotide strands:
 RNA is made of a single polynucleotide strand:
Nucleotide NucleotideNucleotide
Nucleotide
Nucleotide
Nucleotide
Nucleotide
Nucleotide
Nucleotide Nucleotide Nucleotide Nucleotide
NucleotideNucleotide Nucleotide
Nucleotide
Structure of a nucleotide
A nucleotide is made of 3
components:
 A Pentose sugar
 This is a 5 carbon sugar
 The sugar in DNA is deoxyribose.
 The sugar in RNA is ribose.
SponsoredSponsored
Medical Lecture Notes – All SubjectsMedical Lecture Notes – All Subjects
USMLE Exam (America) – PracticeUSMLE Exam (America) – Practice
 DNA is a nucleic acid, made of long chains of nucleotides
DNA and RNA are polymers of
nucleotides
Fi
Nucleotide
Phosphate
group
Nitrogenous
base
Sugar
Polynucleotide Sugar-phosphate backbone
DNA nucleotide
Phosphate
group
Nitrogenous base
(A, G, C, or T)
Thymine (T)
Sugar
(deoxyribose)
Structure of a nucleotide
 A Nitrogenous base
 In DNA the four bases are:
 Thymine
 Adenine
 Cytosine
 Guanine
 In RNA the four bases are:
 Uracil
 Adenine
 Cytosine
 Guanine
 DNA has four kinds of bases, A, T, C, and G
Pyrimidines
Thymine (T) Cytosine (C)
Purines
Adenine (A) Guanine (G)
Nitrogenous bases – Two types
Pyramidines
Thymine - T
Cytosine - C
Uracil - U
Purines
Adenine - A
Guanine - G
The Rule:
 Adenine always base pairs with Thymine (or
Uracil if RNA)
 Cytosine always base pairs with Guanine.
 This is beacuse there is exactly enough room for
one purine and one pyramide base between the
two polynucleotide strands of DNA.
DNA base composition follows Chargaff’s
Rules
 DNA has equal numbers of adenine and thymine
residues (A = T)
 DNA also has equal numbers of guanine and cytosine
residues (G = C)
 Structural basis for Chargaff’s rules lie in the
hydrogen bonds between the bases. G always hydrogen
bonds with C and A always forms base pairs with T.
 Base composition of a specific organism is
characteristic of that organism (independent of tissue
type).
 DNA composition varies among different organisms. It
ranges from 25% to 75% G + C in different species of
bacteria.
 RNA, when forming duplexes, also follows Chargaff’s
rules
DNA
 Deoxyribonucleic Acid
 4 Bases
 Purines
 Adenine
 Guanine
 Pyrimidines
 Cytosine
 Thymine*
 Sugar is Deoxyribose
Adenine
OH
P
H
CH2O
H
O
NH2
N
N
N
N
O
O
RNA
 Ribonucleic Acid
 4 Nucleotides
 Purine
 Adenine
 Guanine
 Pyrimidines
 Cytocine
 Uracil*
 Sugar is Ribose
OHOH
P
H
CH2O
H
O
NH2
N
N
N
N
O
O
Adenine
DNA RNA
Deoxyribonucleic Acid Ribonucleic Acid
Sugar=deoxyribose Sugar= ribose
Contains 1 more H atom
than deoxyribose
Double stranded Single stranded- a single
strand of nucleotides
Nitrogen bases: ATCG Nitrogen bases: AUCG
U=Uracil
2. Gene structure
 Genes are the basic physical and functional units
of heredity. Each gene is located on a particular
region of a chromosome and has a specific
ordered sequence of nucleotides (the building
blocks of DNA).
What is a locus?
 A locus describes the
region of a chromosome
where a gene is located.
11p15.5 is the locus for
the human insulin gene. 11
is the chromosome number,
p indicates the short arm
of the chromosome, and
15.5 is the number
assigned to a particular
region on a chromosome.
 When chromosomes are
stained in the lab, light and
dark bands appear, and
each band is numbered.
The higher the number,
the farther away the band
is from the centromere.
Exons and Introns
 Eukaryotic genes have introns and exons.
 Exons contain nucleotides that are translated
into amino acids of proteins.
 Exons are separated from one another by
intervening segments of junk DNA called introns.
 Introns do not code for protein. They are
removed when eukaryotic mRNA is processed.
 Exons make up those segments of mRNA that are
spliced back together after the introns are
removed; the intron-free mRNA is used as a
template to make proteins.
Splicing
 Exons are sequences of DNA that are expressed
into protein.
 Introns are intervening sequences that are not
translated into protein
DNA
Pre-mRNA
31
1 2 3
1 32
2
Spliced mRNA
3
C
C
C
Exons and Coding
Exons often are described as short segments of protein
coding sequence. This is a bit of an oversimplification.
Exons are those segments of sequence that are spliced
together after the introns have been removed from the pre-
mRNA.
The coding sequence is contained in exons, but it is
possible for some exons to contain no coding sequence.
Portions of exons or even entire exons may contain
sequence that is not translated into amino acids.
These are the untranslated regions or UTRs.
UTRs are found upstream and downstream of the protein-
coding sequence.
Gene Theory
 The Gene Theory is one of the basic principles
of biology.
 The main concept of this theory is that traits are
passed from parents to offspring through gene
transmission. 
 Genes are located on chromosomes and consist
of DNA.
 They are passed from parent to offspring
through reproduction.
4. Biosynthesis of protein
 Messenger RNA= mRNA is a form of RNA that
carries the instructions for making the protein
from a gene and delivers it to the site of
translation.
 Codon= three nucleotide sequence
 Transfer RNA= tRNA single strands of RNA that
temporarily carry a specific amino acid on one end
and has an anticodon
 Anticodon-a 3 nucleotide sequence that is
complementary to an mRNA codon
 Ribosomal RNA= rRNA- a part of the structure
of ribosomes
Codon and Anticodon
 Codon-found on mRNA Anticodon-found on tRNA
 Transcription= process of making RNA from DNA
 Translation= RNA directions are used to make a
protein from amino acids
• DNA→RNA →Protein
 Transcription Translation
nucleus
Cytoplasm on
ribosome
TRANSLATION-
Assembling proteins- in the cytoplasm
 mRNA leaves nucleus and enters cytoplasm
 tRNA molecules with the complementary anticodon
and a specific amino acid arrives at the ribosome
where the mRNA is waiting.
 Peptide bond forms between amino acids
 tRNA molecule leaves and a new one comes with
another amino acid.
 Amino acids continue to attach together until the
stop codon and a protein is formed
Explain the steps in protein synthesis.
 http://www.youtube.com/watch?
v=NNASRkIU5Fw (RNA: DNA)
 http://www.youtube.com/watch?v=h3b9ArupXZg
(Transcription :Translation)

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The Structure of DNA and RNA

  • 1. 1.1. The structure of DNA andThe structure of DNA and RNARNA 2.2. Gene StructureGene Structure 3.3. Gene TheoryGene Theory 4.4. Biosynthesis of proteinBiosynthesis of protein
  • 2.  1866: Gregor Mendel publishes Experiments in Plant Hybridization, which lays out the basic theory of genetics. It is widely ignored until 1900.  1871: Friedrich Miescher isolates “nucleic acid” from pus cells.  1910: Thomas Hunt Morgan proves that genes are located on the chromosomes (using Drosophila).  1953: James Watson and Francis Crick determine the structure of the DNA molecule, which leads directly to knowledge of how it replicates  1966: Marshall Nirenberg solves the genetic code, showing that 3 DNA bases code for one amino acid.  1972: Stanley Cohen and Herbert Boyer combine DNA from two different species in vitro, then transform it into bacterial cells: first DNA cloning.  2001: Sequence of the entire human genome is announced.
  • 3. The structure of DNA and RNA  Genetic material of living organisms is either DNA or RNA.  DNA – Deoxyribonucleic acid  RNA – Ribonucleic acid  Genes are lengths of DNA that code for particular proteins.
  • 4. DNA and RNA are polynucleotides  Both DNA and RNA are polynucleotides.  They are made up of smaller molecules called nucleotides.  DNA is made of two polynucleotide strands:  RNA is made of a single polynucleotide strand: Nucleotide NucleotideNucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide NucleotideNucleotide Nucleotide Nucleotide
  • 5. Structure of a nucleotide A nucleotide is made of 3 components:  A Pentose sugar  This is a 5 carbon sugar  The sugar in DNA is deoxyribose.  The sugar in RNA is ribose.
  • 6. SponsoredSponsored Medical Lecture Notes – All SubjectsMedical Lecture Notes – All Subjects USMLE Exam (America) – PracticeUSMLE Exam (America) – Practice
  • 7.  DNA is a nucleic acid, made of long chains of nucleotides DNA and RNA are polymers of nucleotides Fi Nucleotide Phosphate group Nitrogenous base Sugar Polynucleotide Sugar-phosphate backbone DNA nucleotide Phosphate group Nitrogenous base (A, G, C, or T) Thymine (T) Sugar (deoxyribose)
  • 8. Structure of a nucleotide  A Nitrogenous base  In DNA the four bases are:  Thymine  Adenine  Cytosine  Guanine  In RNA the four bases are:  Uracil  Adenine  Cytosine  Guanine
  • 9.  DNA has four kinds of bases, A, T, C, and G Pyrimidines Thymine (T) Cytosine (C) Purines Adenine (A) Guanine (G)
  • 10. Nitrogenous bases – Two types Pyramidines Thymine - T Cytosine - C Uracil - U Purines Adenine - A Guanine - G
  • 11.
  • 12. The Rule:  Adenine always base pairs with Thymine (or Uracil if RNA)  Cytosine always base pairs with Guanine.  This is beacuse there is exactly enough room for one purine and one pyramide base between the two polynucleotide strands of DNA.
  • 13. DNA base composition follows Chargaff’s Rules  DNA has equal numbers of adenine and thymine residues (A = T)  DNA also has equal numbers of guanine and cytosine residues (G = C)  Structural basis for Chargaff’s rules lie in the hydrogen bonds between the bases. G always hydrogen bonds with C and A always forms base pairs with T.  Base composition of a specific organism is characteristic of that organism (independent of tissue type).  DNA composition varies among different organisms. It ranges from 25% to 75% G + C in different species of bacteria.  RNA, when forming duplexes, also follows Chargaff’s rules
  • 14. DNA  Deoxyribonucleic Acid  4 Bases  Purines  Adenine  Guanine  Pyrimidines  Cytosine  Thymine*  Sugar is Deoxyribose Adenine OH P H CH2O H O NH2 N N N N O O
  • 15. RNA  Ribonucleic Acid  4 Nucleotides  Purine  Adenine  Guanine  Pyrimidines  Cytocine  Uracil*  Sugar is Ribose OHOH P H CH2O H O NH2 N N N N O O Adenine
  • 16. DNA RNA Deoxyribonucleic Acid Ribonucleic Acid Sugar=deoxyribose Sugar= ribose Contains 1 more H atom than deoxyribose Double stranded Single stranded- a single strand of nucleotides Nitrogen bases: ATCG Nitrogen bases: AUCG U=Uracil
  • 17. 2. Gene structure  Genes are the basic physical and functional units of heredity. Each gene is located on a particular region of a chromosome and has a specific ordered sequence of nucleotides (the building blocks of DNA).
  • 18. What is a locus?  A locus describes the region of a chromosome where a gene is located. 11p15.5 is the locus for the human insulin gene. 11 is the chromosome number, p indicates the short arm of the chromosome, and 15.5 is the number assigned to a particular region on a chromosome.  When chromosomes are stained in the lab, light and dark bands appear, and each band is numbered. The higher the number, the farther away the band is from the centromere.
  • 19. Exons and Introns  Eukaryotic genes have introns and exons.  Exons contain nucleotides that are translated into amino acids of proteins.  Exons are separated from one another by intervening segments of junk DNA called introns.  Introns do not code for protein. They are removed when eukaryotic mRNA is processed.  Exons make up those segments of mRNA that are spliced back together after the introns are removed; the intron-free mRNA is used as a template to make proteins.
  • 20. Splicing  Exons are sequences of DNA that are expressed into protein.  Introns are intervening sequences that are not translated into protein DNA Pre-mRNA 31 1 2 3 1 32 2 Spliced mRNA 3 C C C
  • 21. Exons and Coding Exons often are described as short segments of protein coding sequence. This is a bit of an oversimplification. Exons are those segments of sequence that are spliced together after the introns have been removed from the pre- mRNA. The coding sequence is contained in exons, but it is possible for some exons to contain no coding sequence. Portions of exons or even entire exons may contain sequence that is not translated into amino acids. These are the untranslated regions or UTRs. UTRs are found upstream and downstream of the protein- coding sequence.
  • 22. Gene Theory  The Gene Theory is one of the basic principles of biology.  The main concept of this theory is that traits are passed from parents to offspring through gene transmission.   Genes are located on chromosomes and consist of DNA.  They are passed from parent to offspring through reproduction.
  • 23. 4. Biosynthesis of protein  Messenger RNA= mRNA is a form of RNA that carries the instructions for making the protein from a gene and delivers it to the site of translation.  Codon= three nucleotide sequence  Transfer RNA= tRNA single strands of RNA that temporarily carry a specific amino acid on one end and has an anticodon  Anticodon-a 3 nucleotide sequence that is complementary to an mRNA codon  Ribosomal RNA= rRNA- a part of the structure of ribosomes
  • 24.
  • 25. Codon and Anticodon  Codon-found on mRNA Anticodon-found on tRNA
  • 26.  Transcription= process of making RNA from DNA  Translation= RNA directions are used to make a protein from amino acids • DNA→RNA →Protein  Transcription Translation nucleus Cytoplasm on ribosome
  • 27. TRANSLATION- Assembling proteins- in the cytoplasm  mRNA leaves nucleus and enters cytoplasm  tRNA molecules with the complementary anticodon and a specific amino acid arrives at the ribosome where the mRNA is waiting.  Peptide bond forms between amino acids  tRNA molecule leaves and a new one comes with another amino acid.  Amino acids continue to attach together until the stop codon and a protein is formed
  • 28.
  • 29. Explain the steps in protein synthesis.
  • 30.  http://www.youtube.com/watch? v=NNASRkIU5Fw (RNA: DNA)  http://www.youtube.com/watch?v=h3b9ArupXZg (Transcription :Translation)