Secondary lymphoid organs include lymph nodes, spleen, tonsils, adenoids, appendix, Peyer's patches, and other mucosa-associated lymphoid tissues (MALT). They trap antigens and mount immune responses by activating B and T cells. Lymph nodes contain cortex, paracortex, and medulla regions and filter lymph. The spleen filters blood and contains red pulp and white pulp. MALT includes tissues like Peyer's patches in the intestine and tonsils, which protect mucosal surfaces from pathogens.