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PCR AND ITS TYPES
CONTENTS
• PCR Definition
• PCR history
• PCR procedure
• PCR types
• PCR applications
• Conclusion
• References
• POLYMERASE CHAIN
REACTION
Pcr
PCR STEPS
PCR STEPS
PCR STEPS
Cycling conditions for amplifying longer PCR products
Step Time/cycles Temperature
Initial activation step 2 min 95°C
3-step cycling
Denaturation 10 s 94°C
Annealing 1 min 50–68°C*
Extension 1 min/kb
Number of cycles 40 cycles 68°C
End of PCR cycling Indefinite 4°C
PCR
PCR TYPES
PCR TYPE
• Overlap-extension PCR or Splicing by overlap
extension (SOEing) :
• Genetic engineering technique
• used to splice together two or more DNA
fragments OR complementary sequences.
• It is the technique enables creation of
specific and long DNA constructs.
• It can also introduce deletions, insertions or
point mutations into a DNA sequence.
• Nested PCR
• This PCR increases the sensitivity
• Two sets of primers,
• A double process of amplification .
• The first set of primers allow a first
amplification. The product of this PCR is
subjected to a second PCR using the second
set of primers.
• Primers used in the second PCR are specific
to an internal amplified sequence in the first
PCR. specificity of the first PCR product is
verified with the second one.
• Semi quantitative PCR
• An approximation to the relative amount of
nucleic acids present in a sample,
• The markers commonly used are
• Apo A1 and B actin.
• Amplification product is separated by
electrophoresis
• Multiplex PCR
• Multiplex PCR is an adaptation of PCR which
allows simultaneous amplification of many
sequences.
• This technique is used for diagnosis of
different diseases
• Multiplex PCR can detect different pathogens
in a single sample.
PCR TYPES
Applications of PCR and impact on
science
• PCR and its different variations are highlighted
as the most commonly used in laboratories
and research institutes.
• Thus, these have contributed to identification
• characterization of several organisms and
understanding of physiopathology of diverse
• diseases in human, animal and plants.
• MEDICINE
• identification of microorganisms
assurance of blood
• Forensic
• As a basic procedure to investigate Deaths
• (paternity testing)
• Evidence from minimal samples of saliva,
semen or other tissue debris
AGRICULTURE
• As conventional PCR or qPCR have also
facilitated research in
• Detection of pathogens in plants, animals,
and the environment; understanding of their
• Epidemiology and, development of new
diagnostic tests, treatments or vaccines.
• Selective DNA isolation
• Isolation of DNA fragments from genomic DNA
by selective amplification of a specific region of
DNA.
• This use of PCR augments many methods, such as
generating hybridization Probes and DNA cloning
which require larger amounts of DNA,
representing a specific DNA region.
• PCR supplies these techniques with high
amounts of pure DNA, enabling analysis of DNA
samples Possible.

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PCR AND ITS TYPE

  • 1. PCR AND ITS TYPES
  • 2. CONTENTS • PCR Definition • PCR history • PCR procedure • PCR types • PCR applications • Conclusion • References
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  • 7. Pcr
  • 10.
  • 12. Cycling conditions for amplifying longer PCR products Step Time/cycles Temperature Initial activation step 2 min 95°C 3-step cycling Denaturation 10 s 94°C Annealing 1 min 50–68°C* Extension 1 min/kb Number of cycles 40 cycles 68°C End of PCR cycling Indefinite 4°C
  • 13.
  • 14. PCR
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  • 18.
  • 19. • Overlap-extension PCR or Splicing by overlap extension (SOEing) : • Genetic engineering technique • used to splice together two or more DNA fragments OR complementary sequences. • It is the technique enables creation of specific and long DNA constructs. • It can also introduce deletions, insertions or point mutations into a DNA sequence.
  • 20. • Nested PCR • This PCR increases the sensitivity • Two sets of primers, • A double process of amplification . • The first set of primers allow a first amplification. The product of this PCR is subjected to a second PCR using the second set of primers. • Primers used in the second PCR are specific to an internal amplified sequence in the first PCR. specificity of the first PCR product is verified with the second one.
  • 21.
  • 22. • Semi quantitative PCR • An approximation to the relative amount of nucleic acids present in a sample, • The markers commonly used are • Apo A1 and B actin. • Amplification product is separated by electrophoresis
  • 23. • Multiplex PCR • Multiplex PCR is an adaptation of PCR which allows simultaneous amplification of many sequences. • This technique is used for diagnosis of different diseases • Multiplex PCR can detect different pathogens in a single sample.
  • 25. Applications of PCR and impact on science • PCR and its different variations are highlighted as the most commonly used in laboratories and research institutes. • Thus, these have contributed to identification • characterization of several organisms and understanding of physiopathology of diverse • diseases in human, animal and plants.
  • 26. • MEDICINE • identification of microorganisms assurance of blood • Forensic • As a basic procedure to investigate Deaths • (paternity testing) • Evidence from minimal samples of saliva, semen or other tissue debris
  • 27. AGRICULTURE • As conventional PCR or qPCR have also facilitated research in • Detection of pathogens in plants, animals, and the environment; understanding of their • Epidemiology and, development of new diagnostic tests, treatments or vaccines.
  • 28. • Selective DNA isolation • Isolation of DNA fragments from genomic DNA by selective amplification of a specific region of DNA. • This use of PCR augments many methods, such as generating hybridization Probes and DNA cloning which require larger amounts of DNA, representing a specific DNA region. • PCR supplies these techniques with high amounts of pure DNA, enabling analysis of DNA samples Possible.