Nuclear magnetic double resonance (NDMR) involves applying two radiofrequency signals during an NMR experiment. This allows decoupling of signals from different nuclei, resulting in simplified spectra. NDMR techniques include varying the magnetic field or radiofrequency while keeping the other constant. 13C NMR is useful in organic structure elucidation since 13C is spin active unlike 12C. NMR spectroscopy determines structure by analyzing how nuclei reorient in an external magnetic field and the energy changes involved. Its primary applications are structure determination, qualitative and quantitative analysis of mixtures, and studying phenomena like hydrogen bonding and molecular interactions.
PRINCIPLES of FT-NMR & 13C NMR
Fourier Transform
FOURIER TRANSFORM NMR SPECTROSCOPY
THEORY OF FT-NMR
13C NMR SPECTROSCOPY
Principle
Why C13-NMR is required though we have H1-NMR?
CHARACTERISTIC FEATURES OF 13 C NMR
Chemical Shifts
NUCLEAR OVERHAUSER ENHANCEMENT
Short-Comings of 13C-NMR Spectra
Types of crystals & Application of x raykajal pradhan
some basic information:-
A crystal lattice is a 3-D arrangement of unit cells.
Unit cell is the smallest unit of a crystal, By stacking identical unit cells, the entire lattice can be constructed
A crystal’s unit cell dimensions are defined by six numbers, the lengths of the 3 axes, a, b, and c, and the three interaxial angles, α, β and γ.
If a unit cell has the same type of atom at the corners of the unit cell but not also in the middle of the faces nor in the centre of the cell, it is called primitive and given by symbol P
7 types of crystal system details
14 bravis lattice
APPLICATION X-RAY CRYSTALLOGRAPHY
1. Structure of crystals
2. Polymer characterisation
3. State of anneal in metals
4. Particle size determination
a) Spot counting method
b) Broadening of diffraction lines
c) Low-angle scattering
5.Applications of diffraction methods to complexes
a) Determination of cis- trans isomerism
b) Determination of linkage isomerism
6.Miscellaneous applications
PRINCIPLES of FT-NMR & 13C NMR
Fourier Transform
FOURIER TRANSFORM NMR SPECTROSCOPY
THEORY OF FT-NMR
13C NMR SPECTROSCOPY
Principle
Why C13-NMR is required though we have H1-NMR?
CHARACTERISTIC FEATURES OF 13 C NMR
Chemical Shifts
NUCLEAR OVERHAUSER ENHANCEMENT
Short-Comings of 13C-NMR Spectra
Types of crystals & Application of x raykajal pradhan
some basic information:-
A crystal lattice is a 3-D arrangement of unit cells.
Unit cell is the smallest unit of a crystal, By stacking identical unit cells, the entire lattice can be constructed
A crystal’s unit cell dimensions are defined by six numbers, the lengths of the 3 axes, a, b, and c, and the three interaxial angles, α, β and γ.
If a unit cell has the same type of atom at the corners of the unit cell but not also in the middle of the faces nor in the centre of the cell, it is called primitive and given by symbol P
7 types of crystal system details
14 bravis lattice
APPLICATION X-RAY CRYSTALLOGRAPHY
1. Structure of crystals
2. Polymer characterisation
3. State of anneal in metals
4. Particle size determination
a) Spot counting method
b) Broadening of diffraction lines
c) Low-angle scattering
5.Applications of diffraction methods to complexes
a) Determination of cis- trans isomerism
b) Determination of linkage isomerism
6.Miscellaneous applications
Introduction
working principle
fragmentation process
general rules for fragmentation
general modes of fragmentation
metastable ions
isotopic peaks
applications
Quadrupole and Time of Flight Mass analysers.Gagangowda58
Description about important mass analysers Quadrupole and TOF: Principle, Construction and Working, Advantages and Disadvantages and their Applications.
Introduction
working principle
fragmentation process
general rules for fragmentation
general modes of fragmentation
metastable ions
isotopic peaks
applications
Quadrupole and Time of Flight Mass analysers.Gagangowda58
Description about important mass analysers Quadrupole and TOF: Principle, Construction and Working, Advantages and Disadvantages and their Applications.
Theory of NMR, nuclear magnetic resonance, instrumentation, solvents, chemical shift, photon NMR, spin coupling, coupling constant and applications.
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A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
NMR spectroscopy(double resonance, C 13 NMR, applications)
1.
2. NUCLEAR MAGNETIC DOUBLE
RESONANCE
INTRODUCTION
SPIN-SPIN DECOUPLING BY NDMR
13C NMR
APPLICATION OF NMR
3. During a normal NMR experiment the sample
is subjected to a single radiofrequency field. If a
2nd radiofrequency is applied in a specific
manner, then a series of techniques collectively
known as NUCLEAR MAGNETIC DOUBLE
RESONANCE.
4. During an NMR experiment on a sample
AX system, the X nucleus is irradiated with a
2nd radiofrequency signal of frequency (vx)
equal to the precessional frequency of X, then
the X- nuclei will undergo rapid changes of spin state.
Nucleus A is aware of only one equivalent spin state of X
and therefore its resonance signal appears, not as a
doublet, but as a sharp singlet.
Irradiation of X effectively decouples the signal form A.
Similarly if A is irradiated with a 2nd r/f signal equal to
its own resonance frequency (vA), then the signal from X
will collapse to a singlet.
5.
6. Double resonance experiments may be performed
either by:
Keeping both the applied frequency (v1) and the
irradiation frequency (v2) constant, and varying the
magnetic field or
By having a constant magnetic field (Bo) and
irradiation frequency (v2), and sweeping with the
applied frequency (v1).
The irradiating frequency (v2) may be changed after
each scan, permitting an extensive investigation of
spin-spin coupling.
Nuclear triple response, where two irradiation
frequencies are applied simultaneously and the signal
due to a third nucleus examined, is valuable in the
investigation of multiple and long-range coupling.
7. Carbon-12 nucleus is spin inactive, I = 0
Carbon-13 nucleus is spin active, I = ½
Hence C-13 NMR spectroscopy is possible and very
useful in organic structure elucidation
8. It is based on the principle that major nuclei of atoms
possess magnetic moments and angular momentum
and external magnetic field is applied to them, they
arrange themselves in the direction of the magnetic
field.
Let us consider an example of 13C atom as a magnet
which has a north pole and a south pole. If we place
the atom in a magnetic field, then the 13C atom will
reorient itself in such a way that the north pole will
be pointing towards the south pole of the magnetic
field.
9. Similarly, the other atoms also have magnetic
moment based on their lone pairs.
When they are placed in some external magnetic
field, they reorient themselves. This reorientation is
termed as α-spin.
Once the reorientation of the atoms in the direction
of the magnetic field is accomplished, some energy
in the form of radio waves are provided to the same
atom so that the atom can reorient themselves into
the opposite direction. This spin is termed as β-spin.
In this spin the north pole of the nucleus will be
facing the north pole of the magnetic field. Hence
this spin will lead to the arrangement of the nucleus
against the magnetic field.
10. The energy required for the same task is very less as
the energy difference between the α-spin and the β-
spin is not large.
As the energy provided to the nucleus will lead to β-
spin, when we remove the energy, the nucleus will
relax back to its original state i.e., the α state.
When the nucleus returns to its initial state, there
would be fluctuation in the magnetic field which is
often termed as Resonance.
11. The primary applications of NMR are in the field
of structure determination and delineration.
Structural diagnosis by NMR or Qualitative
analysis:
A large number of principles are known which
will decide about the structure of an unknown from
its NMR spectra.
Quantitative analysis:
NMR spectroscopy has been used to determine
the molar ratio of the components in a mixture.
12. Hydrogen bonding:
The NMR can be used to study the Hydrogen
bonding in metal chelates as well as in organic
compounds.
Structure determination:
Structure of SOF4(Thionyl tetrafluoride):
F O F
S
F F
13. Structure of ClF3(Chlorine trifluoride):
FB
FA Cl FA
Linkage Isomerism:
If a ligand can be bonded to a metal in
several alternative ways, NMR spectroscopy
can be used in some cases to show which
particular linkage isomer is present.
Structure of polyethylene (P.E)
14. Exchange effects
Elemental analysis
Determination of optical purity
Study of molecular interactions: Micelle
formation, drug- macromolecule/ drug receptor
interaction.