Different types of Nanolithography technique.
Types: Electron beam lithography, Photolithography, electron-beam writing, ion- lithography, X-ray lithography, and related images, concepts and graphical views.
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Preeti Choudhary
Nanoimprint Lithography head points:
Approaches: thermal and UV NIL
Properties of NIL
Overview. of NIL
Thermal NIL resists.
Residual layer after NIL.
NIL for large features (more difficult than small one).
Room temperature NIL, reverse NIL, inking.
NIL of bulk resist (polymer sheet, pellets).
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Metallic Thin Film Deposition for Sensing ApplicationsMinh Tran
This poster presented the deposition of metallic thin film by the wet-chemistry methods, i.e. the galvanic displacement and the electrodeposition. The methods offered not only the simplicity and low-cost of the experimental setup, but also certain levels of control over the morphology, density, and size of the deposited metallic nanostructures. Several characterization methods were applied to examine the thin films, including the SEM, AFM, XRD, and XPS. Furthermore, thin film deposition by physical and chemical vapor deposition will be outlined for future work. Finally, the samples were tested for their applicability for Surface Enhanced Raman Spectroscopy (SERS) in which low concentrations of Rhodamine 6G (R6G) dye and paraoxon, a highly toxic organophosphate pesticide, were detected. They showed promising results.
Different types of Nanolithography technique.
Types: Electron beam lithography, Photolithography, electron-beam writing, ion- lithography, X-ray lithography, and related images, concepts and graphical views.
I hope this presentation helpful for you.
https://www.linkedin.com/in/preeti-choudhary-266414182/
https://www.instagram.com/chaudharypreeti1997/
https://www.facebook.com/profile.php?id=100013419194533
https://twitter.com/preetic27018281
Please like, share, comment and follow.
stay connected
If any query then contact:
chaudharypreeti1997@gmail.com
Thanking-You
Preeti Choudhary
Nanoimprint Lithography head points:
Approaches: thermal and UV NIL
Properties of NIL
Overview. of NIL
Thermal NIL resists.
Residual layer after NIL.
NIL for large features (more difficult than small one).
Room temperature NIL, reverse NIL, inking.
NIL of bulk resist (polymer sheet, pellets).
https://www.linkedin.com/in/preeti-choudhary-266414182/
https://www.instagram.com/chaudharypreeti1997/
https://www.facebook.com/profile.php?id=100013419194533
https://twitter.com/preetic27018281
Please like, share, comment and follow.
stay connected
If any query then contact:
chaudharypreeti1997@gmail.com
Thanking-You
Preeti Choudhary
Metallic Thin Film Deposition for Sensing ApplicationsMinh Tran
This poster presented the deposition of metallic thin film by the wet-chemistry methods, i.e. the galvanic displacement and the electrodeposition. The methods offered not only the simplicity and low-cost of the experimental setup, but also certain levels of control over the morphology, density, and size of the deposited metallic nanostructures. Several characterization methods were applied to examine the thin films, including the SEM, AFM, XRD, and XPS. Furthermore, thin film deposition by physical and chemical vapor deposition will be outlined for future work. Finally, the samples were tested for their applicability for Surface Enhanced Raman Spectroscopy (SERS) in which low concentrations of Rhodamine 6G (R6G) dye and paraoxon, a highly toxic organophosphate pesticide, were detected. They showed promising results.
A Multiscale Simulation Approach for Diesel Particulate Filter Design Based o...Ries Bouwman
The majority of Diesel exhaust gas aftertreatment system design and development
work is done experimentally by means of long and expensive engine bench tests.
The final system configuration is generally the product of a series of experimental
“trial and error” operations. In order to shorten the development process, to reduce
testing costs and to increase the durability of Diesel Particulate Filters (DPFs), multidisciplinary
simulation tools are needed to predict possible failures of the DPF.
Recently, several numerical models have been developed to simulate globally the
soot loading capacity, the pressure drop evolution and the regeneration behaviour in
ceramic wall-flow filters. Less effort has been devoted to the development of
dedicated models for the simulation of the microstructural flow phenomena and
thermo-mechanical behaviour of the filters.
This paper describes the development of a multi-physics software tool based on
OpenFOAM embedded in the DexaSIM Graphical User Interface (GUI) which is able
to handle the evolution of microstructural material properties and complex physical
phenomena inside the filter material as well as response of complete filters under
engine operating conditions.
The modelling approach hence builds on the multiscale link between microstructural
evolution and specific macroscopic exhaust system features with the objective to
achieve major improvements in material design and lifecycle assessment.
Lattice dilation of metallic nickel film deposited by plasma-spraying on a ceramic layer that is also prepared by plasma-spraying, has been investigated by high resolution terahertz imaging and sequential zooming of the images to quantify the lattice parameter by graphical analysis. A metallic nickel sample
was first imaged, and its measured lattice constant was found to be in agreement with the known value.
Subsequently, four additional samples containing plasma-sprayed nickel film have also been imaged via an identical procedure. The lattice images of all samples were used for graphical analysis and quantification of the respective lattice parameters. Four samples, viz., 77, 81, 129 and 111 have been analyzed and their lattice dilation was investigated. It was found that the lattice distance (d) of these samples is in the order as, d77 < d81 < d129 < d111 and higher than the value of metallic nickel. Unit cell volume and density were also calculated for each sample from the measured lattice parameter. The density was found in the decreasing order for the 4 samples; i.e., ρρρ ρ77 > ρ81 > ρ129 > ρ111 and the density values are significantly lower than the value for nickel. To our knowledge, this is the first direct evidence of the lattice dilation of plasma-sprayed metallic nickel measured via the terahertz lattice imaging, without requiring an electron microscope. Thus, the results presented herein establish an exciting extension of camera-less, reconstructive terahertz imaging technique that produces such a clear lattice image of nickel and allows to quantify the lattice parameter. The technique, however, is a general one, applicable to any material.
3D-PTV is a 3D Particle Tracking Velocimetry experimental technique used in the experimental research of turbulence. main source of information is http://ptvwiki.netcipia.net
Nanomanufacturing is both the generation of nanoscaled materials, which can be powders or liquids, and the assembling of parts "base up" from nanoscaled materials or "top down" in littlest strides for high exactness, utilized as a part of a few advances, for example, laser removal, drawing and others. Nanomanufacturing varies from atomic assembling, which is the produce of complex, nanoscale structures by method for nonbiological mechanosynthesis.
Keynote at Euromat 2015 (session d1.1: imaging, diffraction and tomography) to promote usage of advanced image processing techniques to treat 3D data (mainly damage and correlation with microstructure)
Abstract: A terahertz sub-surface scanner is introduced that utilizes reflection mode non-contact
interrogation of surfaces and interior layers of composite substrates with resolution of ~1 nm. Quantitative
measurements are done by implementing a modified Beer-Lambert’s law.
Investigating material decay of historical buildings using visual analytics w...Beniamino Murgante
Investigating material decay of historical buildings using visual analytics with multi-temporal infrared thermographic data
Urska Demsar, Martin Charlton – National Centre for Geocomputation, National University of Ireland , Maynooth ( Ireland )
Nicola Masini, Maria Danese – Archaeological and monumental heritage institute, National Research Council, Potenza ( Italy )
Intelligent Analysis of Environmental Data (S4 ENVISA Workshop 2009)
Abstract— This paper demonstrates overcoming of the Abbe diffraction limit (ADL) on image resolution. Here, terahertz multispectral reconstructive imaging has been described and used for analyzing nanometer size metal lines fabricated on a silicon wafer. It has also been demonstrated that while overcoming the ADL is a required condition, it is not sufficient to achieve sub-nanometer image resolution with longer wavelengths. A nanoscanning technology has been developed that exploits the modified Beer-Lambert’s law for creating a measured reflectance data matrix and utilizes the ‘inverse distance to power equation’ algorithm for achieving 3D, sub-nanometer image resolution. The nano-lines images reported herein, were compared to SEM images. The terahertz images of 70 nm lines agreed well with the TEM images. The 14 nm lines by SEM were determined to be ~15 nm. Thus, the wavelength dependent Abbe diffraction limit on image resolution has been overcome. Layer-by-layer analysis has been demonstrated where 3D images are analyzed on any of the three orthogonal planes. Images of grains on the metal lines have also been analyzed. Unlike electron microscopes, where the samples must be in the vacuum chamber and must be thin enough for electron beam transparency, terahertz imaging is non-destructive, non-contact technique without laborious sample preparation.
Abstract:
This paper demonstrates overcoming of the Abbe diffraction limit (ADL) on image resolution. Here, terahertz multispectral reconstructive imaging has been described and used for analyzing nanometer size metal lines fabricated on a silicon wafer. It has also been demonstrated that while overcoming the ADL is a required condition, it is not sufficient to achieve sub-nanometer image resolution with longer wavelengths. A nanoscanning technology has been developed that exploits the modified Beer-Lambert’s law for creating a measured reflectance data matrix and utilizes the ‘inverse distance to power equation’ algorithm for achieving 3D, sub-nanometer image resolution. The nano-lines images reported herein, were compared to SEM images. The terahertz images of 70 nm lines agreed well with the TEM images. The 14 nm lines by SEM were determined to be 15 nm. Thus, the wavelength dependent Abbe diffraction limit on image resolution has been overcome. Layer-by-layer analysis has been demonstrated where 3D images are analyzed on any of the three orthogonal planes. Images of grains on the metal lines have also been analyzed. Unlike electron microscopes, where the samples must be in the vacuum chamber and must be thin enough for electron beam transparency, terahertz imaging is non-destructive, non-contact technique without laborious sample preparation.
A Multiscale Simulation Approach for Diesel Particulate Filter Design Based o...Ries Bouwman
The majority of Diesel exhaust gas aftertreatment system design and development
work is done experimentally by means of long and expensive engine bench tests.
The final system configuration is generally the product of a series of experimental
“trial and error” operations. In order to shorten the development process, to reduce
testing costs and to increase the durability of Diesel Particulate Filters (DPFs), multidisciplinary
simulation tools are needed to predict possible failures of the DPF.
Recently, several numerical models have been developed to simulate globally the
soot loading capacity, the pressure drop evolution and the regeneration behaviour in
ceramic wall-flow filters. Less effort has been devoted to the development of
dedicated models for the simulation of the microstructural flow phenomena and
thermo-mechanical behaviour of the filters.
This paper describes the development of a multi-physics software tool based on
OpenFOAM embedded in the DexaSIM Graphical User Interface (GUI) which is able
to handle the evolution of microstructural material properties and complex physical
phenomena inside the filter material as well as response of complete filters under
engine operating conditions.
The modelling approach hence builds on the multiscale link between microstructural
evolution and specific macroscopic exhaust system features with the objective to
achieve major improvements in material design and lifecycle assessment.
Lattice dilation of metallic nickel film deposited by plasma-spraying on a ceramic layer that is also prepared by plasma-spraying, has been investigated by high resolution terahertz imaging and sequential zooming of the images to quantify the lattice parameter by graphical analysis. A metallic nickel sample
was first imaged, and its measured lattice constant was found to be in agreement with the known value.
Subsequently, four additional samples containing plasma-sprayed nickel film have also been imaged via an identical procedure. The lattice images of all samples were used for graphical analysis and quantification of the respective lattice parameters. Four samples, viz., 77, 81, 129 and 111 have been analyzed and their lattice dilation was investigated. It was found that the lattice distance (d) of these samples is in the order as, d77 < d81 < d129 < d111 and higher than the value of metallic nickel. Unit cell volume and density were also calculated for each sample from the measured lattice parameter. The density was found in the decreasing order for the 4 samples; i.e., ρρρ ρ77 > ρ81 > ρ129 > ρ111 and the density values are significantly lower than the value for nickel. To our knowledge, this is the first direct evidence of the lattice dilation of plasma-sprayed metallic nickel measured via the terahertz lattice imaging, without requiring an electron microscope. Thus, the results presented herein establish an exciting extension of camera-less, reconstructive terahertz imaging technique that produces such a clear lattice image of nickel and allows to quantify the lattice parameter. The technique, however, is a general one, applicable to any material.
3D-PTV is a 3D Particle Tracking Velocimetry experimental technique used in the experimental research of turbulence. main source of information is http://ptvwiki.netcipia.net
Nanomanufacturing is both the generation of nanoscaled materials, which can be powders or liquids, and the assembling of parts "base up" from nanoscaled materials or "top down" in littlest strides for high exactness, utilized as a part of a few advances, for example, laser removal, drawing and others. Nanomanufacturing varies from atomic assembling, which is the produce of complex, nanoscale structures by method for nonbiological mechanosynthesis.
Keynote at Euromat 2015 (session d1.1: imaging, diffraction and tomography) to promote usage of advanced image processing techniques to treat 3D data (mainly damage and correlation with microstructure)
Abstract: A terahertz sub-surface scanner is introduced that utilizes reflection mode non-contact
interrogation of surfaces and interior layers of composite substrates with resolution of ~1 nm. Quantitative
measurements are done by implementing a modified Beer-Lambert’s law.
Investigating material decay of historical buildings using visual analytics w...Beniamino Murgante
Investigating material decay of historical buildings using visual analytics with multi-temporal infrared thermographic data
Urska Demsar, Martin Charlton – National Centre for Geocomputation, National University of Ireland , Maynooth ( Ireland )
Nicola Masini, Maria Danese – Archaeological and monumental heritage institute, National Research Council, Potenza ( Italy )
Intelligent Analysis of Environmental Data (S4 ENVISA Workshop 2009)
Abstract— This paper demonstrates overcoming of the Abbe diffraction limit (ADL) on image resolution. Here, terahertz multispectral reconstructive imaging has been described and used for analyzing nanometer size metal lines fabricated on a silicon wafer. It has also been demonstrated that while overcoming the ADL is a required condition, it is not sufficient to achieve sub-nanometer image resolution with longer wavelengths. A nanoscanning technology has been developed that exploits the modified Beer-Lambert’s law for creating a measured reflectance data matrix and utilizes the ‘inverse distance to power equation’ algorithm for achieving 3D, sub-nanometer image resolution. The nano-lines images reported herein, were compared to SEM images. The terahertz images of 70 nm lines agreed well with the TEM images. The 14 nm lines by SEM were determined to be ~15 nm. Thus, the wavelength dependent Abbe diffraction limit on image resolution has been overcome. Layer-by-layer analysis has been demonstrated where 3D images are analyzed on any of the three orthogonal planes. Images of grains on the metal lines have also been analyzed. Unlike electron microscopes, where the samples must be in the vacuum chamber and must be thin enough for electron beam transparency, terahertz imaging is non-destructive, non-contact technique without laborious sample preparation.
Abstract:
This paper demonstrates overcoming of the Abbe diffraction limit (ADL) on image resolution. Here, terahertz multispectral reconstructive imaging has been described and used for analyzing nanometer size metal lines fabricated on a silicon wafer. It has also been demonstrated that while overcoming the ADL is a required condition, it is not sufficient to achieve sub-nanometer image resolution with longer wavelengths. A nanoscanning technology has been developed that exploits the modified Beer-Lambert’s law for creating a measured reflectance data matrix and utilizes the ‘inverse distance to power equation’ algorithm for achieving 3D, sub-nanometer image resolution. The nano-lines images reported herein, were compared to SEM images. The terahertz images of 70 nm lines agreed well with the TEM images. The 14 nm lines by SEM were determined to be 15 nm. Thus, the wavelength dependent Abbe diffraction limit on image resolution has been overcome. Layer-by-layer analysis has been demonstrated where 3D images are analyzed on any of the three orthogonal planes. Images of grains on the metal lines have also been analyzed. Unlike electron microscopes, where the samples must be in the vacuum chamber and must be thin enough for electron beam transparency, terahertz imaging is non-destructive, non-contact technique without laborious sample preparation.
A new Compton scattered tomography modality and its application to material n...irjes
Imaging modalities exploiting the use of Compton scattering are currently under active investigation. However, despite many innovative contributions, this topic still poses a formidable mathematical and technical challenge. Due to the very particular nature of the Compton effect, the main problem consists of obtaining the reconstruction of the object electron density. Investigations on Compton scatter imaging for biological tissues, organs and the like have been performed and studied widely over the years. However in material sciences, in particular in non-destructive evaluation and control, this type of imaging procedure is just at its beginning. In this paper, we present a new scanning process which collects scattered radiation to reconstruct the internal electronic distribution of industrial materials. As an illustration, we shall look at one of the most widely used construction material: concrete and its variants in civil engineering. The Compton scattered radiation approach is particularly efficient in imaging steel frame and voids imbedded in bulk concrete objects.
We present numerical simulation results to demonstrate the viability and performances of this imaging modality.
Keywords :- Compton scattering , Gamma-ray imaging , Non-destructive testing/evaluation (NDT/NDE), Concrete: structure and defects, Radon transform
MODELING STUDY OF LASER BEAM SCATTERING BY DEFECTS ON SEMICONDUCTOR WAFERSjmicro
Accurate modeling of light scattering from nanometer scale defects on Silicon wafersiscritical for enabling
increasingly shrinking semiconductor technology nodes of the future. Yet, such modeling of defect
scattering remains unsolved since existing modeling techniques fail to account for complex defect and
wafer geometries. Here, we present results of laser beam scattering from spherical and ellipsoidal
particles located on the surface of a silicon wafer. A commercially available electromagnetic field solver
(HFSS) was deployed on a multiprocessor cluster to obtain results with previously unknown accuracy
down to light scattering intensity of -170 dB. We compute three dimensional scattering patterns of silicon
nanospheres located on a semiconductor wafer for both perpendicular and parallel polarization and show
the effect of sphere size on scattering. We further computer scattering patterns of nanometer scale
ellipsoidal particles having different orientation angles and unveil the effects of ellipsoidal orientation on
scattering.
MODELING STUDY OF LASER BEAM SCATTERING BY DEFECTS ON SEMICONDUCTOR WAFERSjmicro
Accurate modeling of light scattering from nanometer scale defects on Silicon wafersiscritical for enabling
increasingly shrinking semiconductor technology nodes of the future. Yet, such modeling of defect
scattering remains unsolved since existing modeling techniques fail to account for complex defect and
wafer geometries. Here, we present results of laser beam scattering from spherical and ellipsoidal
particles located on the surface of a silicon wafer. A commercially available electromagnetic field solver
(HFSS) was deployed on a multiprocessor cluster to obtain results with previously unknown accuracy
down to light scattering intensity of -170 dB. We compute three dimensional scattering patterns of silicon
nanospheres located on a semiconductor wafer for both perpendicular and parallel polarization and show
the effect of sphere size on scattering. We further computer scattering patterns of nanometer scale
ellipsoidal particles having different orientation angles and unveil the effects of ellipsoidal orientation on
scattering.
it includes generations and advancement in CT. In generations fifth generation CT is described in detail.
UFC detector, stellar detectors and gemstone detector is also described
straton x-ray tube, MRC, LIMAX and aquillion one xray tube
different techniques used in CT
dual energy CT is also described
Abstract
Terahertz sub-surface imaging offers an effective solution for surface and 3D imaging because of minimal
sample preparation requirements and its ability to “see” below the surface. Another important property is the ability
to inspect on a layer-by layer basis via a non-contact route, non-destructive route. Terahertz 3D imager designed
at Applied Research and Photonics (Harrisburg, PA) has been used to demonstrate reconstructive imaging with a
resolution of less than a nanometer. Gridding with inverse distance to power equations has been described for 3D
image formation. A continuous wave terahertz source derived from dendrimer dipole excitation has been used for
reflection mode scanning in the three orthogonal directions. Both 2D and 3D images are generated for the analysis
of silver iodide quantum dots’ size parameter. Layer by layer image analysis has been outlined. Graphical analysis
was used for particle size and layer thickness determinations. The demonstrated results of quantum dot particle
size checks well with those determined by TEM micrograph and powder X-ray diffraction analysis. The reported
non-contact measurement system is expected to be useful for characterizing 2D and 3D naomaterials as well as for process development and/or quality inspection at the production line.
Detection and Monitoring Intra/Inter Crosstalk in Optical Network on Chip IJECEIAES
Multiprocessor system-on-chip (MPSoC) has become an attractive solution for improving the performance of single chip in objective to satisfy the performance growing exponentially of the computer applications as multimedia applications. However, the communication between the different processors’ cores presents the first challenge front the high performance of MPSoC. Besides, Network on Chip (NoC) is among the most prominent solution for handling the on-chip communication. Besides, NoC potential limited by physical limitation, power consumption, latency and bandwidth in the both case: increasing data exchange or scalability of Multicores. Optical communication offers a wider bandwidth and lower power consumption, based on, a new technology named Optical Network-on-Chip (ONoC) has been introduced in MPSoC. However, ONoC components induce the crosstalk noise in the network on both forms intra/inter crosstalk. This serious problem deteriorates the quality of signals and degrades network performance. As a result, detection and monitoring the impairments becoming a challenge to keep the performance in the ONoC. In this article, we propose a new system to detect and monitor the crosstalk noise in ONoC. Particularly, we present an analytic model of intra/inter crosstalk at the optical devices. Then, we evaluate these impairments in objective to present the motivation to detect and monitor crosstalk in ONoC, in which our system has the capability to detect, to localize, and to monitor the crosstalk noise in the whole network. This system offers high reliability, scalability and efficiency with time running time less than 20 ms.
Abstract
Terahertz spectral analysis has been conducted on epitaxially grown semiconductor structures. Epitaxially grown semiconductors are important for microelectronic and optoelectronic devices and also for integrated circuits
fabricated using semiconductors. In this paper, we report results of terahertz time-domain spectroscopy of grown
SiGe layers on Ge buffer and separately a Ge buffer that was grown on a Si <001> wafer. In particular, evolution of
the time-domain spectra as a function of thickness of both samples was investigated by the terahertz pump-probe
technique. Representative spectra were analyzed to determine the respective layers’ spectral signatures. It was found that the spectroscopic analysis uniquely identified different layers by characteristic absorbance peaks. In addition, terahertz imaging was conducted in a non-destructive, non-contact mode for detecting lattice stacking fault and dislocations. Sub-surface imaging of grown SiGe layers on Ge buffer and that of the Ge buffer grown on a Si wafer reveals interesting lattice features in both samples. A comparison with TEM images of the samples exhibits that the terahertz image reproduces the dimensions found from TEM images within the experimental error limits. In particular, 3D images of both samples were generated by the terahertz reconstructive technique. The images were analyzed by graphical means to determine the respective layer thicknesses. Thus, this technique offers a versatile tool for both semiconductor research and in-line inspections.
Quick scanning X-ray microscopy at the European Synchrotron (ESRF) in Grenoble is a fast, non destructive, quantitative technique to measure all components of strain tensor in a matrix.
Source Drain contact depostion for microelectronics is a complex process. Ultrathin polycrystalline films are usually formed and they are difficult to characterise. 3D reciprocal space mapping allows to characterise with one image the phases, texture and grain orientation.
X-ray reflectivity is a very effective technique giving information on thickness, electron density and roughness of wafer bonding interfaces. The synchrotron X-ray beam allows to perform XRR in transmission mode and have information even from very thin layers with very low electron desity materials (like water). This technique is available as a service at the PAC-G.
Combined X-ray diffraction and X-ray fluorescence allows researchers to optimize the performance of
multi-layered, post-fabricated organic photovoltaic devices doped with gold nanoparticles.
A new solution has been developed thanks to PAC-G to characterise 3D integration systems, which aims to make devices smaller.
STMicroelectronics has worked with a team of researchers from the CEA-Leti and the ESRF - The European Synchrotron, using synchrotron tomographies contrast.
Computed tomography techniques offer good information about the voids present in the pillars and, in the case of synchrotron radiation, also about the intermetallic shapes.
The Platform for Advanced Characterisation - Grenoble (PAC-G) supports Industrial companies such as Airbus in the qualification of electronic components. For instance, PAC-G helps investigate the threat of the thermal neutrons induced SEU rate at ground level and at aircraft altitudes.
The PAC-G offer an easy access to two high quality neutron facilities dedicated to neutron-induced Single Event Effects (SEE) tests. Fast and Thermal neutron tests are required to assess the reliability of highly integrated devices for critical applications; high energy neutrons can in addition help to prepare proton and heavy ion tests. The PAC-G allows you to have access, on the same site, to a broad spectrum of neutron energies from fast to thermal neutrons (14 MeV, 2.5 MeV and 25 meV).
More from Platform for Advanced Characterisation Grenoble (PAC-G) (7)
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
The increased availability of biomedical data, particularly in the public domain, offers the opportunity to better understand human health and to develop effective therapeutics for a wide range of unmet medical needs. However, data scientists remain stymied by the fact that data remain hard to find and to productively reuse because data and their metadata i) are wholly inaccessible, ii) are in non-standard or incompatible representations, iii) do not conform to community standards, and iv) have unclear or highly restricted terms and conditions that preclude legitimate reuse. These limitations require a rethink on data can be made machine and AI-ready - the key motivation behind the FAIR Guiding Principles. Concurrently, while recent efforts have explored the use of deep learning to fuse disparate data into predictive models for a wide range of biomedical applications, these models often fail even when the correct answer is already known, and fail to explain individual predictions in terms that data scientists can appreciate. These limitations suggest that new methods to produce practical artificial intelligence are still needed.
In this talk, I will discuss our work in (1) building an integrative knowledge infrastructure to prepare FAIR and "AI-ready" data and services along with (2) neurosymbolic AI methods to improve the quality of predictions and to generate plausible explanations. Attention is given to standards, platforms, and methods to wrangle knowledge into simple, but effective semantic and latent representations, and to make these available into standards-compliant and discoverable interfaces that can be used in model building, validation, and explanation. Our work, and those of others in the field, creates a baseline for building trustworthy and easy to deploy AI models in biomedicine.
Bio
Dr. Michel Dumontier is the Distinguished Professor of Data Science at Maastricht University, founder and executive director of the Institute of Data Science, and co-founder of the FAIR (Findable, Accessible, Interoperable and Reusable) data principles. His research explores socio-technological approaches for responsible discovery science, which includes collaborative multi-modal knowledge graphs, privacy-preserving distributed data mining, and AI methods for drug discovery and personalized medicine. His work is supported through the Dutch National Research Agenda, the Netherlands Organisation for Scientific Research, Horizon Europe, the European Open Science Cloud, the US National Institutes of Health, and a Marie-Curie Innovative Training Network. He is the editor-in-chief for the journal Data Science and is internationally recognized for his contributions in bioinformatics, biomedical informatics, and semantic technologies including ontologies and linked data.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
PRESENTATION ABOUT PRINCIPLE OF COSMATIC EVALUATION
X-ray nanoprobe aids 3D chip integration
1. The results
The challenge
Synchrotron X-ray nanotomography allows manufacturers to visualise voids and phases in copper-pillar
interconnects with unprecedented resolution.
At a glance:
X-ray nanoprobe
aids 3D chip integration
Context
For the past 50 years the ability to pack greater
numbers of transistors onto silicon chips has
brought exponentially increasing computing
power and put the microelectronics industry at
the center of economic and social development.
While transistors have continued to get smaller,
faster and more efficient, however, issues such
as heat management and current leakage are
jeopardizing this famous trend.
In order to build processors that can embrace
ever larger data sets and novel IT paradigms such
as the Internet of Things, manufacturers are
turning to advanced “More than Moore” chip
architectures -- including those based on greater
3D integration of chips. 3D fabrication processes
are now reaching a high degree of complexity,
with copper pillars that pass vertically between
silicon planes proving a promising though-
silicon-via (TSV) technology.
Reliable interconnects are key to ensure that
different layers of the 3D stacked structure can
communicate at high speeds. Measuring between
1—20 microns in diameter and formed by drilling
small holes in silicon, copper pillars present a
major manufacturing challenge. Any defects or
voids within the material can lead to spikes in the
current density that may damage components
and affect device performance.
IRT Nanoelec partner ST Microelectronics used
X-ray nano-tomography and fluorescence at
ESRF nanoimaging beamline ID16A to visualize
voids in copper pillars in a prototype 3D-
integrated chip. Their aim was to characterize the
mechanical stability of the pillar and thus quality
of the interconnect by studying the location of
voids and elemental phases.
New synchrotron X-ray techniques at the ESRF offer unique capabilities for non-destructive
imaging of 3D architectures. The extremely small spot size and high penetration depth of the X-
ray beam revealed the existence of voids in the sample with a resolution of just 23nm.
X-ray fluorescence, meanwhile, allowed the team to establish the presence of different
elements – including the complex phases that result from alloys formed during soldering (see
image).
2. The technique
▪ ESRF beamline ID16A is a unique experimental station
that uses advanced X-ray optics and a long baseline to
produce a high-brilliance beam focused down to
nanometer size.
▪ Nano computed tomography (nanoCT) and X-ray
fluorescence (XRF) allow quantitative 3D characterisation
of the morphology and the elemental composition of
specimens in their native state.
▪ NanoCT requires collecting a large number of magnified
phase contrast radiographs while the sample is turned
over a 180 degree angle, while in XRF the sample is
scanned through the tight focus while collecting the
fluorescence signal characteristic of the different
elements present in the device.
▪ Scanning time in 3D was of the order of three hours and
produces a data set of several tens of GB per sample,
although 2D radiographs can be obtained in a fraction of a
second.
▪ Upgrades to the ESRF source will lead to much improved
resolution, allowing smaller device structures to be
studied during in operando experiments.
Conclusion
ESRF beamline ID16A offers a unique nanoprobe for
quantitative 3D characterisation of the morphology and
the elemental composition of samples in their native state.
Applying the technique to copper pillars shows that voids
can be resolved at length scales more than ten times
shorter than is possible using commercial laboratory
equipment. The success of the experiment led ST
Microelectronics to invest in a long-term proposal to
characterize even smaller voids in copper pillars and to
explore other promising TSV architectures. The ultimate
aim is to be able to apply the technique to ensembles of
TSVs and perform in-operando analysis on whole working
devices.
ESRF beamline ID16A is a unique experimental
station that uses advanced X-ray optics and a long
baseline to produce a high-brilliance beam focused
ESRF beamline ID16A offers a unique
nanoprobe for quantitative 3D
c
Nano-computed tomography of a copper pillar reveals the distribution of voids (left), while
fluorescence tomography slices at different heights (right) show the elemental phases in the
soldered region on top of the pillar: silver (red), nickel (blue), tin (green) and copper (grey). [P
Bleuet et al. SPIE Developments in x-ray tomography IX, 2014, San Diego]
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baseline to produce a high-brilliance beam focused
down to nanometer size.
Nano computed tomography (nanoCT) and X-ray
fluorescence (XRF) allow quantitative 3D
characterization of the morphology and the elemental
composition of specimens in their native state.
NanoCT requires collecting a large number of
magnified phase contrast radiographs while the
sample is turned over a 180 degree angle, while in XRF
the sample is scanned through the tight focus while
collecting the fluorescence signal characteristic of the
different elements present in the device.
Scanning time in 3D was of the order of three hours
and produces a data set of several tens of GB per
sample, although 2D radiographs can be obtained in a
fraction of a second.
Upgrades to the ESRF source will lead to much
improved resolution, allowing smaller device
structures to be studied during in operando
experiments.
nanoprobe for quantitative 3D
characterization of the morphology and the
elemental composition of samples in their
native state. Applying the technique to
copper pillars shows that voids can be
resolved at length scales more than ten
times shorter than is possible using
commercial laboratory equipment.
The success of the experiment led ST
Microelectronics to invest in a long-term
proposal to characterize even smaller voids
in copper pillars and to explore other
promising TSV architectures. The ultimate
aim is to be able to apply the technique to
ensembles of TSVs and perform in-
operando analysis on whole working
devices.