Somaclonal Variation in Plant tissue culture - Variation in somaclones (somatic cells of plants)
Somaclonal variation # Basis of somaclonal variation # General feature of Somaclonal variations # Types and causes of somaclonal variation # Isolation procedure of somaclones via without in-vitro method and with in-vitro method with their limitations and advantages # Detection of isolated somaclonal variation # Application (with examples respectively related to crop improvement) # Advantages and disadvantages of somaclonal variations.
https://www.youtube.com/watch?v=IZwrkgADM3I
Also watch, Gametoclonal variation slides to understand, how to changes occur in gametoclones of plants.
https://www.slideshare.net/SharmasClasses/gametoclonal-variation
Somaclonal Variation in Plant tissue culture - Variation in somaclones (somatic cells of plants)
Somaclonal variation # Basis of somaclonal variation # General feature of Somaclonal variations # Types and causes of somaclonal variation # Isolation procedure of somaclones via without in-vitro method and with in-vitro method with their limitations and advantages # Detection of isolated somaclonal variation # Application (with examples respectively related to crop improvement) # Advantages and disadvantages of somaclonal variations.
https://www.youtube.com/watch?v=IZwrkgADM3I
Also watch, Gametoclonal variation slides to understand, how to changes occur in gametoclones of plants.
https://www.slideshare.net/SharmasClasses/gametoclonal-variation
A process where an embryo is derived from a single somatic cell or group of somatic cells. Somatic embryos (SEs) are formed from plant cells that are not normally involved in embryo formation.
Embryos formed by somatic embryogenesis are called Embryoids.
The process was discovered for the first time in Daucas carota L. (carrot) by Steward (1958), Reinert (1959).
plant pathogen interaction
different types of pathogens
gene for gene hypothesis
direct receptor model
Elicitor receptor model
suppersor repressor model
gaurd hypothesis
Pathogenesis-related proteins (initially named “b” proteins) were discovered in tobacco leaves
hypersensitively reacting to TMV by two independently working groups (Van Loon and Van Kammen,
1970; Gianinazzi et al., 1970)
Meristem tip culture for the production of the virus free plantsArjun Rayamajhi
This presentation gives general idea on the meristem tip culture for the production of the virus free plants. The principles, methods and procedures of the meristem tip culture included. General idea on different in vitro culture techniques for virus elimination meristem tip culture viz. thermotherapy, cryotherapy,chemotherapy and electrotherapy are provided.
WHAT IS ARTIFICIAL SEED..?
Artificial seed can be defined as artificial encapsulation of somatic embryos, shoot bud or aggregates of cell of any tissues which has the ability to form a plant in in-vitro or ex-vivo condition.
Artificial seed have also been often referred to as synthetic seed.
HISTORY
Artificial seeds were first introduced in 1970’s as a novel analogue to the plant seeds.
The production of artificial seeds is useful for plants which do not produce viable seeds. It represents a method to propagate these plants.
Artificial seeds are small sized and these provides further advantages in storage, handling and shipping.
The term, “EMBLING” is used for the plants originated from synthetic seed.
• The use of synthetic varieties for commercial cultivation was first suggested in Maize (Hays & Garber, 1919).
1.What is plant tissue culture?
2.Production of virus free plants.
3.History.
4.Virus elimination by heat treatment.
5.Virus elimination by Meristem Tip culture.
6.Factor affecting virus eradication by Meristem Tip culture.
7.Chemotherapy.
8.Virus elimination through in vitro shoot-tip Grafting.
9.Virus Indexing.
10.Conclusion .
11.References .
The presentation gives overview of production of secondary metabolites using callus culture as well as tissue culture techniques. Various batch and continuous culturing process are described on the basis of secondary metabolite to be synthesised.
A process where an embryo is derived from a single somatic cell or group of somatic cells. Somatic embryos (SEs) are formed from plant cells that are not normally involved in embryo formation.
Embryos formed by somatic embryogenesis are called Embryoids.
The process was discovered for the first time in Daucas carota L. (carrot) by Steward (1958), Reinert (1959).
plant pathogen interaction
different types of pathogens
gene for gene hypothesis
direct receptor model
Elicitor receptor model
suppersor repressor model
gaurd hypothesis
Pathogenesis-related proteins (initially named “b” proteins) were discovered in tobacco leaves
hypersensitively reacting to TMV by two independently working groups (Van Loon and Van Kammen,
1970; Gianinazzi et al., 1970)
Meristem tip culture for the production of the virus free plantsArjun Rayamajhi
This presentation gives general idea on the meristem tip culture for the production of the virus free plants. The principles, methods and procedures of the meristem tip culture included. General idea on different in vitro culture techniques for virus elimination meristem tip culture viz. thermotherapy, cryotherapy,chemotherapy and electrotherapy are provided.
WHAT IS ARTIFICIAL SEED..?
Artificial seed can be defined as artificial encapsulation of somatic embryos, shoot bud or aggregates of cell of any tissues which has the ability to form a plant in in-vitro or ex-vivo condition.
Artificial seed have also been often referred to as synthetic seed.
HISTORY
Artificial seeds were first introduced in 1970’s as a novel analogue to the plant seeds.
The production of artificial seeds is useful for plants which do not produce viable seeds. It represents a method to propagate these plants.
Artificial seeds are small sized and these provides further advantages in storage, handling and shipping.
The term, “EMBLING” is used for the plants originated from synthetic seed.
• The use of synthetic varieties for commercial cultivation was first suggested in Maize (Hays & Garber, 1919).
1.What is plant tissue culture?
2.Production of virus free plants.
3.History.
4.Virus elimination by heat treatment.
5.Virus elimination by Meristem Tip culture.
6.Factor affecting virus eradication by Meristem Tip culture.
7.Chemotherapy.
8.Virus elimination through in vitro shoot-tip Grafting.
9.Virus Indexing.
10.Conclusion .
11.References .
The presentation gives overview of production of secondary metabolites using callus culture as well as tissue culture techniques. Various batch and continuous culturing process are described on the basis of secondary metabolite to be synthesised.
Plant - Pathogen Interaction and Disease DevelopmentKK CHANDEL
Plant diseases are the result of infection by any living organisms that adversely affect the growth, development, physiological functioning and productivity of a plant, manifesting outwardly as visible symptoms.
Molecular basis of plant resistance and defense responses to pathogensSenthil Natesan
In response to pathogen attack, plants have evolved sophisticated defense mechanisms to delay or arrest pathogen growth.Unlike animals, plants lack a circulating immune system recognizing microbial pathogens. Plant cells are more autonomous in their defense mechanisms and rely on the innate immune capacity of each cell and systemic signals that disseminate from infection sites (Jones and Dangl, 2006). Plant innate immunity consists of preformed physical and chemical barriers (such as leaf hairs, rigid cell walls, pre-existing antimicrobial compounds) and induced defenses. Should an invading microbe successfully breach the pre-formed barriers, it may be recognized by the plant, resulting in the activation of cellular defense responses that stop or restrict further development of the invader.
Plant protein - Float like a butterfly, Strong like a gorillaJonathan Petrides
Simple, fun facts about plant-based protein and how to be an #allplants champ - the slides from a talk at Just V Show 2016.
[I prefer pictures to words, so if you want to hear a bit more detail I put it in this blog - https://medium.com/@JNPetrides/plant-protein-float-like-a-butterfly-strong-like-a-gorilla-fcfba24fe16c#.zfqukuxa9]
https://www.instagram.com/allplants/
https://www.facebook.com/allplants
www.allplants.co
PR proteins in plant disease resistance.pptxReddykumarAv
Pathogenesis-related (PR) proteins are proteins produced in plants in the event of a pathogen attack.[1] They are induced as part of systemic acquired resistance. Infections activate genes that produce PR proteins. Some of these proteins are antimicrobial, attacking molecules in the cell wall of a bacterium or fungus. Others may function as signals that spread “news” of the infection to nearby cells. Infections also stimulate the cross-linking of molecules in the cell wall and the deposition of lignin, responses that set up a local barricade that slows spread of the pathogen to other parts of the plant
IOSR Journal of Pharmacy and Biological Sciences(IOSR-JPBS) is an open access international journal that provides rapid publication (within a month) of articles in all areas of Pharmacy and Biological Science. The journal welcomes publications of high quality papers on theoretical developments and practical applications in Pharmacy and Biological Science. Original research papers, state-of-the-art reviews, and high quality technical notes are invited for publications.
Carbohydrates in plant immunity By Kainat RamzanKainatRamzan3
The main classes of carbohydrates associated with plant immunity, their role, and mode of action. More precisely, the state of the art about the perception of “PAMP, MAMP, and DAMP
(Pathogen-, Microbe-, Damage-Associated Molecular Patterns) type” oligosaccharides is
presented and examples of induced defense events are provided.
R protein expression in rice in the recombinant protien which is expressed in rice to overcome all the abiotic factors which is a stress to the rice in some non ecological condition
Artificial Reefs by Kuddle Life Foundation - May 2024punit537210
Situated in Pondicherry, India, Kuddle Life Foundation is a charitable, non-profit and non-governmental organization (NGO) dedicated to improving the living standards of coastal communities and simultaneously placing a strong emphasis on the protection of marine ecosystems.
One of the key areas we work in is Artificial Reefs. This presentation captures our journey so far and our learnings. We hope you get as excited about marine conservation and artificial reefs as we are.
Please visit our website: https://kuddlelife.org
Our Instagram channel:
@kuddlelifefoundation
Our Linkedin Page:
https://www.linkedin.com/company/kuddlelifefoundation/
and write to us if you have any questions:
info@kuddlelife.org
Willie Nelson Net Worth: A Journey Through Music, Movies, and Business Venturesgreendigital
Willie Nelson is a name that resonates within the world of music and entertainment. Known for his unique voice, and masterful guitar skills. and an extraordinary career spanning several decades. Nelson has become a legend in the country music scene. But, his influence extends far beyond the realm of music. with ventures in acting, writing, activism, and business. This comprehensive article delves into Willie Nelson net worth. exploring the various facets of his career that have contributed to his large fortune.
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Introduction
Willie Nelson net worth is a testament to his enduring influence and success in many fields. Born on April 29, 1933, in Abbott, Texas. Nelson's journey from a humble beginning to becoming one of the most iconic figures in American music is nothing short of inspirational. His net worth, which estimated to be around $25 million as of 2024. reflects a career that is as diverse as it is prolific.
Early Life and Musical Beginnings
Humble Origins
Willie Hugh Nelson was born during the Great Depression. a time of significant economic hardship in the United States. Raised by his grandparents. Nelson found solace and inspiration in music from an early age. His grandmother taught him to play the guitar. setting the stage for what would become an illustrious career.
First Steps in Music
Nelson's initial foray into the music industry was fraught with challenges. He moved to Nashville, Tennessee, to pursue his dreams, but success did not come . Working as a songwriter, Nelson penned hits for other artists. which helped him gain a foothold in the competitive music scene. His songwriting skills contributed to his early earnings. laying the foundation for his net worth.
Rise to Stardom
Breakthrough Albums
The 1970s marked a turning point in Willie Nelson's career. His albums "Shotgun Willie" (1973), "Red Headed Stranger" (1975). and "Stardust" (1978) received critical acclaim and commercial success. These albums not only solidified his position in the country music genre. but also introduced his music to a broader audience. The success of these albums played a crucial role in boosting Willie Nelson net worth.
Iconic Songs
Willie Nelson net worth is also attributed to his extensive catalog of hit songs. Tracks like "Blue Eyes Crying in the Rain," "On the Road Again," and "Always on My Mind" have become timeless classics. These songs have not only earned Nelson large royalties but have also ensured his continued relevance in the music industry.
Acting and Film Career
Hollywood Ventures
In addition to his music career, Willie Nelson has also made a mark in Hollywood. His distinctive personality and on-screen presence have landed him roles in several films and television shows. Notable appearances include roles in "The Electric Horseman" (1979), "Honeysuckle Rose" (1980), and "Barbarosa" (1982). These acting gigs have added a significant amount to Willie Nelson net worth.
Television Appearances
Nelson's char
"Understanding the Carbon Cycle: Processes, Human Impacts, and Strategies for...MMariSelvam4
The carbon cycle is a critical component of Earth's environmental system, governing the movement and transformation of carbon through various reservoirs, including the atmosphere, oceans, soil, and living organisms. This complex cycle involves several key processes such as photosynthesis, respiration, decomposition, and carbon sequestration, each contributing to the regulation of carbon levels on the planet.
Human activities, particularly fossil fuel combustion and deforestation, have significantly altered the natural carbon cycle, leading to increased atmospheric carbon dioxide concentrations and driving climate change. Understanding the intricacies of the carbon cycle is essential for assessing the impacts of these changes and developing effective mitigation strategies.
By studying the carbon cycle, scientists can identify carbon sources and sinks, measure carbon fluxes, and predict future trends. This knowledge is crucial for crafting policies aimed at reducing carbon emissions, enhancing carbon storage, and promoting sustainable practices. The carbon cycle's interplay with climate systems, ecosystems, and human activities underscores its importance in maintaining a stable and healthy planet.
In-depth exploration of the carbon cycle reveals the delicate balance required to sustain life and the urgent need to address anthropogenic influences. Through research, education, and policy, we can work towards restoring equilibrium in the carbon cycle and ensuring a sustainable future for generations to come.
Natural farming @ Dr. Siddhartha S. Jena.pptxsidjena70
A brief about organic farming/ Natural farming/ Zero budget natural farming/ Subash Palekar Natural farming which keeps us and environment safe and healthy. Next gen Agricultural practices of chemical free farming.
UNDERSTANDING WHAT GREEN WASHING IS!.pdfJulietMogola
Many companies today use green washing to lure the public into thinking they are conserving the environment but in real sense they are doing more harm. There have been such several cases from very big companies here in Kenya and also globally. This ranges from various sectors from manufacturing and goes to consumer products. Educating people on greenwashing will enable people to make better choices based on their analysis and not on what they see on marketing sites.
2. Content
Introduction
Occurrence of PR protein
Properties of PR protein
Induction of PR protein
Families of PR protein
Function of PR protein
Conclusion
Recent studies
2
3. INTRODUCTION
Pathogenesis-related proteins, often called PR proteins, are a structurally diverse
group of plant proteins that are toxic to invading fungal pathogens.
They are widely distributed in plants in trace amounts, but are produced in much
greater concentration in pathogen attack or stress.
Varying types of PR proteins have been isolated from each of several crop plants.
Different plant organs, e.g., leaves, seeds, and roots, may produce different sets of PR
proteins.
The several groups of PR proteins have been classified according to their function,
serological relationship, amino acid sequence, molecular weight, and certain other
properties.
PR proteins are either extremely acidic or extremely basic and therefore are highly
soluble and reactive.
3
4. At least 14 families of PR proteins are recognized. The better known PR proteins are
PR1 proteins (antioomycete and antifungal),
PR2 (b-1,3-glucanases),
PR3 (chitinases),
PR4 proteins (antifungal),
PR6 (proteinase inhibitors)
thaumatine-like proteins,
Defensins, thionins, lysozymes, osmotinlike proteins, lipoxygenases, cysteine-rich
proteins, glycine-rich proteins, proteinases, chitosanases, and peroxidases.
There are often numerous isoforms of each PR protein in various host plants.
Although healthy plants may contain trace amounts of several PR proteins, attack by
pathogens, treatment with elicitors, wounding, or stress induce transcription of a
battery of genes that code for PR proteins .
4
5. Occurrence:-
1. In several plant species upon infection with viruses, viroids or bacteria the
development of symptoms is accompanied by appearance of one or more new
proteins. such protein found in tobacco & recently has been detected in 16 species.
3. The occurance of these new proteins is not pathogen specific but determined by the
type of reaction in host plant this is indicated that they are host specific.
4. All are identified by polyacrylamide gel electrophoresis run either in the absence or in
the presence of SDS & stained with general protein stains.
5. At least tobacco & cowpea ,PRs are found predominantly outside the cytoplasm in the
intercellular spaces.
6. They must secreted through plasma lemma.at least four tobacco PRs first identified
are not glycoproteins nor oxidase or hydrolases such as peroxidases, Ribonuclease,
protease & phosphatase which are known to be present in intercellular space.
7. Their resistance to proteases in an obvious requirement for a function in this
environment in which proteolytic enzyme abound.
5
6. Properties:-
1.Both tobacco & bean PR elute from gel filtration columns than bulk of protein from
healthy leaves i.e it indicate that they are low molecular weight protein & their large
polyacrylamide gel electrophoresis due to charge differences.
2. They are selectively low pH, where they are soluble than other proteins. Ten PRs can be
identified as prominent bands when crude low pH extracts are subjected to the same
electrophoretic procedure.
3.They are highly resistant to the endogenous plant proteases as well as to commercial
protease preparation including trypsin.chymotrypsin,papain, & protease k.
4.They are not protease inhibitor nor produced by treatment of protein extracts from non
infected leaves with proteases.
6
7. Induction of PR protein :-
1.They are induced by plasmolysis. since they are also induced artificially by the
application of a variety of chemicals notably Polyacrylic acid, Benzoic acid derivatives .
2. Various plant hormones as well as culture filtrates from pathogenic fungus or
bacterium. It has been proposed that induction might be the result of some type of
stress.
3. Ethylene is produced by most plant tissues as a general reaction to stress & PRs can
be induced in all tobacco tested to date by ethepon by which ethylene released in plant
as well as natural precursor of ethylene i.e 1-aminocyclopropane-1-carboxylic acid
(ACC).
4. This gives idea that the induction of PRs is mediated by ethylene, at least in tobacco .
5.Induction under all conditions investigated so far is associated with stimulated
ethylene production.
7
8. 6. When leaf discs infected with TMV were floated on a solution of amino
ethoxyvinylglycine which specially blocks the formation of ACC
(1-aminocyclopropane-1-carboxylic acid) in biosynthesis of ethylene.
7.Induction of PRs by ethepon or salicylic acid in tobacco is inhibited by cyclohexamide
or D-2-(4-methyl-2,6-dinitroanilin)-N-methyl propionamide both inhibitor of protein
synthesis on cytoplasmic ribosomes.
8
9. Sr No. Family Type /Member Properties
1. PR-1 Tobacco PR-1a Unknown
2. PR-2 Tobacco PR-2 β-1,3-glucanase
3. PR-3 Tobacco P,Q Chitinase type I,II,IV,V,VI,VII
4. PR-4 Tobacco R Chitinase type I,II
5. PR-5 Tobacco S Thaumatin like protein
6. PR-6 Tomato Inhibitor-I Protease inhibitor
7. PR-7 Tomato P69 Endoproteinase
8. PR-8 Cucumber chitinase Chitinase type III
9. PR-9 Tobacco lignin forming
peroxidase
Peroxidase
10. PR-10 Parsley PR-1 Ribosome inactivating
protein
11. PR-11 Tobacco class V chitinase Chitinase type I
12. PR-12 Radish R5 AFP-3 Defensins
13. PR-13 Arabidopsis TH.12-1 Thionins
14. PR-14 Barley LTP-4 Lipid transfer protein
The families of pathogenesis-related proteins
9
10. Pathogenesis-related(PR) protein 1
The first PR- 1 protein was discovered in 1970.
Since then, a number of PR-1 proteins have been identified in
1. Arabidopsis
2. Barley
3. Tobacco
4. Rice
5. Pepper
6. Tomato
7. Wheat
8. Maize
These PR-1 having 14 to 17 kD molecular weight and mostly of basic nature.
Occurance & Molecular nature
10
11. Non-expressors of Pathogenesis-Related Genes1 (NPR1) regulate systemic acquired
resistance via regulation pathogenesis related-1 (PR-1) in Arabidopsis thaliana.
The interaction of nucleus-localized NPR1 with TGA transcription factors, after reduction
of cysteine residues of NPR 1 by salicylic acid (SA) results in the activation of defense
genes of PR-1. In the absence of TAG 2 and/or SA expression of PR-1 not occur in
Arabidopsis thaliana.
PR-1 proteins have antifungal activity at the micromolar level against a number of plant
pathogenic fungi, including Uromyces fabae, Phytophthora infestans, and Erysiphe
graminis.
The exact mode of action of the antifungal activities of these proteins are yet to
be identified but a PR-1-like protein, helothermine, from the Mexican banded
lizard have been found to be interacting with the membrane-channel proteins of
target cells, inhibiting the release of Ca2+.
Mode of action
11
12. Pathogenesis related protein-2
Example:- β-Glucanases
Occurance & Properties:-
Plant β-1,3-glucanases (β -1,3-Gs) comprises of large and highly complex gene families
involved in pathogen defense as well as a wide range of normal developmental processes.
β -1,3-Gs have molecular mass in the range from 33 to 44 kDa .
These enzymes are found in wide variety of plants like
1. Peanut,
2. Chickpea
3. Tobacco, etc. and having resistivity against various fungi like Aspergillus parasiticus, A.
flavs, Blumeria graminis.
These enzymes have wide range of isoelectric pH.
Most of the basic β-1,3-Gs are localized in vacuoles of the plant cells while the acidic β –
1,3-Gs are secreted outside the plant cell.
12
13. Wounding, hormonal signals like methyl jasmonate and ethylene , pathogen attack like
fungus Colletotrichum lagenarium and some fungal elicitors releases from pathogen
cell wall can also induced β-1,3-Gs in the various parts of plant.
β-1,3-glucanases are involves in hydrolytic cleavage of the 1,3-β-D-glucosidic linkages
in β-1,3-glucans, a major componant of fungi cell wall. So that cell lysis and cell death
occur as a result of hydrolysis of glucans present in the cell wall of fungi.
The enzyme β-1,3-Gs was found to be strongly induced by ultraviolet (UV-B; 280–
320nm) radiation in primary leaves of French bean (Phaseolus vulgaris), so that UV-I
induced DNA damage is a primary step for the induction of β-1,3-Gs.
β-1,3- glucanases and chitinases are down regulated by combination of auxin and
cytokinin while Abscisic acid (ABA) at a concentration of 10 μM markedly inhibited the
induction of β-1,3-glucanases but not of chitinases.
Mode of Action
13
14. Pathogenesis related protein-3
Occurrence & properties
Example:- Chitinase
Most of Chitinase having molecular mass in the range of 15 kDa and 43 kDa.
Chitinase can be isolated from Chickpea, Cucumber, barley.
The main substrate of Chitinases is chitin is a natural homopolymer of β-1,4- linked N-
acetylglucosamine residues.
Chitinases can be divided into two categories:
1. Exochitinases:- demonstrating activity only for the non-reducing end of the chitin chain.
2. Endochitinases:- which hydrolyse internal β-1,4- glycoside bonds.
Many plant endochitinases,especially those with a high isoelectric point, exhibit an
additional lysozyme or lysozyme like activity.
Chitinase and β-1,3-Glucanase are differentially regulated by Wounding, Methyl
Jasmonate, Ethylene, and Gibberellin.
14
15. Mode of action
Chitinases hydrolyze chitin to soluble oligosaccharides, mainly N,N-diacetylchitobiose
(G2), which is further hydrolyzed to G1 (N-acetylglucosamine) by GlcNAcases.
In some study, it is also found that Chitinase gene are also expressed in response to stress
like cold up to -2 to -5ºC.
These Chitinases have significant antifungal activities against plant pathogenic fungi like
Alternaria sp. For grain discoloration of rice, Bipolaris oryzae for brown spot of rice.
The mode of action of PR-3 proteins is relatively simple i.e. Chitinases cleaves the cell
wall chitin polymers in situ, resulting in a weakened cell wall and rendering fungal cells
osmotically sensitive.
15
16. Chitin Binding Protein
All chitin binding proteins do not possess antifungal activities.CBP can be isolate from
plant
1. suger beet,
2. Hortensia
3. tobacco
4. pepper
5. tomato and potato
6. bacteria like Streptomyces tendae.
Moleculer weight of the CBP was found to be in the range of 9 kDa to 30 kDa and having
basic isoelectric pH.
CBP shows strong inhibitory effect against fungi Aspergillus species, Cercospora beticola,
Xanthomonas campestris and many more and several crop fungal pathogen.
Enzymetically CBP has not any function but it binds to insoluble chitin and enhances
hydrolysis of chitin by other enzyme like Chitinase.
Pathogenesis related protein-4
16
17. Chitin’s biodegradable and anti-fungal properties are also useful for environmental and
agricultural uses.
Chitooligosaccharides, which are the sugar intermediates released during chitin
hydrolysis, also are pharmaceutically important.
CBP, which binds to the insoluble crystalline substrate, leading to structural changes in
the substrate and increased substrate accessibility.
CBP21 strongly promoted hydrolysis of crystalline chitin by chitinases A and C, while it
was essential for full degradation by chitinase B.
CBP variants with single mutations on the largely polar binding surface lost their ability
to promote chitin degradation, while retaining considerable affinity for the polymer.
Thus, binding alone is not sufficient for CBP21 functionality, which seems to depend on
specific, mostly polar interactions between the protein and crystalline chitin.
Mode of Action
17
18. Thaumatin like protein:-
Occurrence & Properties
Thaumatin-like proteins comprise of polypeptides classes that share homology with
thaumatin, sweet protein from (Bennett) Benth.
Thaumatin-like proteins can be isolated from barley, kiwifruit, maize.
Most of the TLPs have a molecular weight in the range of 18 kDa to 25 kDa and have a pH
in the range from 4.5 to 5.5.
Constitutive levels of Thaumatin-Like Protein is typically absent in healthy plants, with
the proteins being induced exclusively in response to wounding or to pathogen attack
like Uncinula necator, Phomopsis viticola.
Linusitin is a 25-kDa Thaumatin-like Protein isolated from flax seeds.
Linustin shows antifungal activity against Alternaria alternata by the mechanism of
membrane permeabilization. Concentration of protein and lipid and composition of cell
wall of fungi play a major role in these mechanisms.
Pathogenesis Related Protein-5
18
19. Thaumatin production is induced in katemfe fruit in response to an attack upon the
plant by viroid pathogens.
Several members of the thaumatin protein family display significant in vitro inhibition
of hyphal growth and sporulation by various fungi.
The thaumatin protein is considered a prototype for a pathogen-response protein
domain. This thaumatin domain has been found in species as diverse as rice and
Caenorhabditis elegans.
The proteins are involved in systematically acquired resistance and stress response
in plants, although their precise role is unknown.
It is induced by attack by viroids, which are single-stranded unencapsulated RNA
molecules that do not code for protein.
The thaumatin protein I consists of a single polypeptide chain of 207 residues.
Like other PR proteins, thaumatin is predicted to have a mainly beta structure, with a
high content of beta-turns and little helix.
Mode of action
19
20. Plant protease inhibitors:-
The possible role of protease inhibitors (PIs) in plant protection was investigated as
early as 1947 by, Mickel and Standish.
The term “protease” includes both “endopeptidases” and “exopeptidases” whereas,
the term “proteinase” is used to describe only “endopeptidases” (Ryan, 1990).
Several non-homologous families of proteinase inhibitors are recognized among the
animal, microorganisms and plant kingdom.
Majority of proteinase inhibitors studied in plant kingdom originates from three
main families namely leguminosae, solanaceae and gramineae (Richardson, 1991).
Many of protease inhibitors are rich in cysteine and lysine, contributing to better
and enhanced nutritional quality.
20
21. These protease inhibitor genes have practical advantages over genes encoding for
complex pathways i.e. by transferring single defensive gene from one plant species to
another and expressing them from their own wound inducible or constitutive
promoters thereby imparting resistance against insect pests (Boulter, 1993).
Protease inhibitors also exhibit a very broad spectrum of activity including
suppression of pathogenic nematodes like Globodera tabaccum, G. pallida, and
Meloidogyne incognita by CpTi (Williamson and Hussey, 1996).
These inhibitor families that have been found are specific for each of the four
mechanistic classes of proteolytic enzymes, and based on the active amino acid in
their “reaction center” (Koiwa et al. 1997), are classified as serine, cysteine, aspartic
and metallo-proteases.
Mode of action
21
22. Pathogenesis related Protein ( PR-10)
Ribosome inactivating protein
Ribosome-inactivating proteins (RIPs) are toxic N-glycosidases that depurinate the
universally conserved sarcin loop of large rRNAs.
This depurination inactivates the ribosome, thereby blocking its further participation
in protein synthesis.
RIPs are widely distributed among different plant genera and within a variety of
different tissues.
Recent work has shown that enzymatic activity of at least some RIPs is not limited to
site-specific action on the large rRNAs of ribosomes but extends to depurination and
even nucleic acid scission of other targets.
Characterization of the physiological effects of RIPs on mammalian cells has
implicated apoptotic pathways. For plants, RIPs have been linked to defense by
antiviral, antifungal, and insecticidal properties demonstrated in vitro and in
transgenic plants. 22
23. CLASSIFICATION OF RIP
1. Type 1 RIPs, such as pokeweed antiviral protein (PAP), saporin (from soapwort) and
barley translation inhibitor, are monomeric enzymes, each with an approximate MW
of 30,000.
They are basic proteins that share a number of highly conserved active cleft residues
and secondary structure within the active site region but are distinctly different in
overall sequence homology and posttranslational modifications
2. Type 2 RIPs, like ricin and abrin, are highly toxic heterodimeric proteins with
enzymatic and lectin properties in separate polypeptide subunits, each of
approximate MW of 30,000 .
One polypeptide with RIP activity (A-chain) is linked to a galactose binding lectin (B-
chain) through a disulfide bond.
3. Type 3 RIPs, are synthesized as inactive precursors (proRIPs) that require
proteolytic processing events to occur between amino acids involved in formation of
the active site. They are isolated from maize and barley, although several close
relatives of maize, including sorghum. 23
24. Mode of action
Type 1 RIPs from Mirabilis expansa roots were active at microgram levels against
several soil borne bacterial species, the first such demonstration of antibacterial
activity from a plant RIP in bioassays.
In addition, these RIPs were active against a wide variety of both pathogenic and
nonpathogenic fungi including Fusarium and Trichoderma species.
Type 1 barley RIP was inhibitory to fungal growth on solid media when tested against
Trichoderma reesei.
Inhibition of growth in liquid media, however, was minimal with barley RIP alone but
increased dramatically when chitinase was also included.
A type 2 RIP from seeds of the camphor tree Cinnamomum camphora, was toxic to
larvae of mosquito and cotton bollworm.
24
25. Plant defensins:-
Occurance & Properties
The main groups of antimicrobial peptides found in plants are thionins, defensins and
lipid transfer proteins. The name “plant defensin” was coined in 1995 by Terras and
collegues.
Plant defensins are small (M.W. 5kDa), basic, cysteine-rich antifungal peptides ranging
from 45 to 54 amino acids, and are positively charged.
The first plant defensins were isolated from wheat and barley and were initially classified
as a subgroup of the thionin family called the γ-thionins.
since they showed a similar size and the same number of disulfide bridges as α and β-
thionins.
The plant defensins Rs-AFP1 and Rs-AFP2 from radish, and alfAFP isolated from seeds of
the alfalfa plants, are examples of potent antifungal proteins.
Pathogenesis related protein-12
25
26. The structure-activity relationships and modes of action for most of the plant defensins
remain unknown. Not all plant defensins have the same mode of action. Some of them
exhibit potent antifungal activity in vitro at micromolar concentrations against a broad
spectrum of filamentous fungi.
Morphogenic antifungal defensins reduce hyphal elongation and induce hyperbranching,
whereas non-morphogenic defensins reduce hyphal elongation without causing any
morphological distortions.
The antifungal activity of plant defensins, whether morphogenic or not, is reduced by
increasing the ionic strength of the fungal growth assay medium.
Antifungal plant defensin, Rs-AFP2, appears to act primarily at the cell membrane and
induces rapid Ca2+ uptake and K+ efflux from Neurospora crassa hyphae and it may thus
inhibit the growth of filamentous fungi by disrupting cytosolic Ca2+ gradients essential
for hyphal tip growth.
Mode of action
26
27. Example:-
Plant -thionins
Thionins are small, basic plant proteins, 45 to 50 amino acids in length, which include
three or four conserved disulfide linkages.
Thionins are mainly found in seeds where they may act as a defence against consumption
by animals.
A barley leaf thionin that is highly toxic to plant pathogens and is involved in the
mechanism of plant defence against microbial infections has also been identified.
The hydrophobic protein crambin from the Abyssinian kale is also a member of the
thionin family.
Pathogenesis related protein-13
27
28. The proteins are toxic to animal cells, presumably attacking the cell membrane and
rendering it permeable, this results in the inhibition of sugar uptake and allows
potassium and phosphate ions, proteins, and nucleotides to leak from cells.
Some thionins are able to inhibit digestive enzymes, bringing thionins to a select
group of plant proteins synthesized in response to insect-pests.
Some thionins described until now are capable to inhibit insect α-amylases and others
could inhibit serine proteases.
γ –hordothionins isolated from sorghum was the first example of a thionin
able to inhibit insect -amylases.
Mode of action
28
29. Pathogenesis related protein-14
Example:-
LIPID-TRANSFER PROTEINS IN PLANTS
Properties:-
Lipid-transfer proteins (LTP) are basic, 9-kDa proteins present in high amounts
in higher plants.
LTPs can enhance the in vitro transfer of phospholipids between membranes and can
bind acyl chains.
On the basis of these properties, LTPs were participate in membrane biogenesis and
regulation of the intracellular fatty acid pools. The principle of the assays is to monitor
the transfer of labelled lipids from donor to acceptor membranes.
Acceptor membranes are either natural membranes such as mitochondria,
chloroplasts, plasma membranes, and “microsomes” (endoplasmic rich-fraction) or
artificial Membranes (liposomes or lipid vesicles). Donor membranes are either
natural membranes or liposomes.
The lipids to be transferred are either radioactive, spin labelled, or fluorescent.
They were found to be secreted and located in the cell wall. Thus, novel roles were
suggested for plant LTPs: participation in cutin formation, embryogenesis, defense
reactions against phytopathogens, symbiosis, and the adaptation of plants to various
environmental conditions.
29
30. Mode of action
Their mode of action is not completely understood. A shuttle mechanism has been
proposed for the phosphatidylcholine- specific LTP from mammalian cells, which
suggests the formation of a phospholipid-LTP complex that interacts with the
membrane and exchanges its bound phospholipid with a phospholipid molecule from
the membrane. A similar sequence of events has been suggested for plant LTPs.
Such a complex has never been isolated from a plant LTP (and also with nonspecific
LTPs from mammalian cells), which suggests that the binding is too weak to allow
formation of a stable complex.
In contrast, a strong binding of acyl chains or of lyso-phosphatidylcholine has been
noted for several plant LTPs.
These binding properties are in agreement with the model suggesting that LTPs
contain a hydrophobic cavity that can accept one acyl chain but not a whole
phospholipid molecule.
30
31. osmotin
Properties & occurance
Cultured tobacco cells adapted to grow under osmotic stress synthesize and
accumulate a 26 Kda protein (osmotin) which can constitute as much as 12%
of total cellular protein.
In cells adapted to NaCl osmotic occurs in two forms:
1. An aqueous soluble form (osmotin-I) and
2. A detergent soluble form (osmotin II) in the approximate ratio of 2:3.
Osmotin strongly resembles the sweet protein thaumatin in its molecular weight,
amino acid composition, N-terminal sequence, and the presence of a signal peptide
on the precursor protein. Thaumatin does not cross-react with antiosmotin.
Immunocytochemical detection of osmotin revealed that osmotin is concentrated in
dense inclusion bodies within the vacuole. Although antiosmotin did not label
organelles, cell walls, or membranes, osmotin appeared sparsely distributed in the
cytoplasm. 31
32. Mode of action:-
Osmotin and other osmotin-like proteins were shown to have antifungal activity in
vitro against a broad range of fungi, including several plant pathogens.
The fungal growth inhibition by osmotin and zeamatin, a maize PR-5 protein,
correlated with plasma membrane permeabilization and dissipation of the
membrane potential, suggesting a physical interaction between PR-5 proteins and
the plasma membrane of sensitive fungi, but the precise mechanism of cytotoxicity
remains unknown.
Many of the PR proteins, including osmotin, exhibit clear specificity of their toxicity
against fungi, indicating that there must be determinants of sensitivity and resistance
in fungal cells osmotin stimulates a mitogen-activated protein kinase (MAPK) signal
system in yeast to induce changes in the cell wall that enhance cytotoxicity of this
antifungal protein.
It has been suggested earlier that the cytotoxic action of plant antifungal proteins
could involve activation of signaling cascades, based on the ability of G protein
inhibitors to block the cytotoxic effect of plant defensin. 32
33. Other Proteins
Theis et al, 2003 investigated the inhibitory effects of the antifungal protein (AFP)
from Aspergillus giganteus.
AFP is a highly basic (Isoelectric point 8.8) polypeptide of 51 amino acids with a
high content of cysteine, tyrosine, and lysine residues.
Seetharaman et al. (1996) identified other AFPs, sormatin,, that increase during
caryopsis development; they were high at physiological maturity and decrease at
combine harvest maturity of the grain.
33
34. They show that the growth inhibitory effect of the AFP is caused by
permebealization of the fungal membranes by using an assay based on the uptake of
the fluorescent dye SYTOX Green.
Pozo et al., 2002 also found the same AFP protein from the Aspergillus giganteus, it
promotes charge neutralization and condensation of DNA as demonstrated by
electrophoretic mobility shift and ethidium bromide displacement assays.
Hagen et al., 2007 found AFP can inhibit the chitin synthesis by the In situ chitin
synthase activity assays.
It indicate that AFP causes cell wall stress and disturbs cell integrity by inactivating
chitin synthase that results in membrane permeability.
Mode of action
34
35. Function of PR protein:-
1. PRs are synthesized in response to some type of stress, their function analogs to the
one postulated heat shock protein might be protect the plant from extensive
damage.
2. During hypersensitive reaction, PRs are first detectable in a ring around are necrosis
center.
3. In the subsequent phase of slow lesion expansion, they reach the highest
concentration at the lesion margin
4. they also accumulate between lesion in that inoculated leaves & may appear in lower
concentration in distant non infected leaves.
5. the occurrence of PRs merely reflects a particular type of stress which changes the
metabolism of the plant & induces as well as resistance further to infection.
35
36. Conclusion
PR proteins play important role in disease resistance, seed germination and also help
the plant to adapt to the environmental stress.
The increasing knowledge about the PR proteins gives better idea regarding the
development and defense system of plants.
Primary aspects of the gene regulation of the PR proteins are understood but the
study of exact mechanism of gene regulation and receptor cascade will open new
ways for the plant genetic engineering technology for crop improvement.
36
37. Recent studies
1. Additional resistance gene(s) against Cladosporium fulvum present on the Cf-9
introgression segment have been shown to be associated with strong PR-protein
accumulation (Laugé et al., 1998).
2. In some pathosystems mRNAs for certain PRs members accumulate to similar levels
in compatible and incompatible interactions, but the maximum level of expression is
reached much faster in the latter (Van Kan et al., 1992).
3. Accumulation of PRs in plants in which resistance is locally or systemically induced.
Generalizing this broad research area it can be stated that PRs are recognized
as markers of the systemic acquired resistance (SAR), and PRs genes are involved
in the list of the so-called SAR-genes (Ward et al., 1991).
4. Some SAR-inducing chemicals, such as benzothiadiazole (BTH), β-aminobutyric acid
(BABA) or 2,6-dichloroisonicotinic acid (DCINA) are harmless commercially
supplied compounds and have promising practical application as novel tools in plant
protection (Van Loon, 1997; Ku, 2001; Edreva, 2004 and references therein). 37
38. 5. Gene-engineering of PR-5 is another promising strategy for improvement of crop
disease resistance, based on the potent plasmolyzing and antifungal effect of this PRs
family.
6. Overexpression of a pepper basic pathogenesis related protein 1 gene in tobacco
plants enhances resistance to heavy metal and pathogen stresses (Sarowar et al.,
2005).
7. For biotechnological purposes PR genes are transferred from novel sources, such as
the insectivorous sundew (Drosera rotundifolia L.) (Matušikova et al., 2004).
38