POST HUMAN GENOME
PROJECT
PRESENTED BY,
D.IRENE
16PGZ001
M.Sc. Zoology,
Lady Doak College,
Madurai
OBJECTIVES
ESTIMATED
TIME
ORGANIZATION
S INVOLVED
To sequence the human genome, identify genes
and describe their function
15 years (1985-2003) costing 3 billion dollars
International consortium of 20 research groups
and Celera genomics
OVERVIEW OF HUMAN GENOME PROJECT
OTHER
ORGANISMS
SEQUENCED
Escherichia coli
Saccharomyces cerevisiae
Caenorhabditis elegans
Arabidopsis thaliana
SIGNIFICANCE
OF HUMAN
GENOME
PROJECT
PROJECTS AFTER HGP
• HapMap project
• ENCODE project
• Human Proteome project
• European Commission’s Human Brain
Project
• Brain Mapping Project
HapMap PROJECT
OBJECTIVES
-To determine common sequence variation
-Frequency
To understand patterns of common genetic
diversity
STARTED ON
2005
COMPLETED
ON
27th October 2002
SAMPLES AND
POPULATIONS
45 samples 90 samples
45 samples
90 samples
OUTCOME OF
THE PROJECT
-The project data are freely
available
-Useful for research
community
-0.1% variation is also
characterized
ENCODE PROJECT
STARTED ON September 2003
EXPECTED
YEAR OF
COMPLETION
2017
OBJECTIVES
-provide a more biologically informative
representation of the human Genome
-To determine the role of ‘junk DNA’
OUTCOME OF
THE PROJECT
-80.4% of human genome had functions in at least 1 cell
type
-integrated with SNP’s to study complex diseases
Showed that ‘junk DNA’ has some function (regulome)
-provided novel aspects of gene expression and
regulation which enhanced the understanding of human
genome and human health and diseases.
HUMAN PROTEOME PROJECT
HUMAN PROTEOME PROJECT
STARTED ON September 23, 2010
OBJECTIVES
-to map the entire human proteome in a systematic
effort using currently available and emerging
techniques.
EXPECTED
YEAR OF
COMPLETION
2020
HUMAN PROTEOME
PROJECT
Chromosome-based
Human Proteome Project
(C-HPP)
Biology and Disease-
Driven Groups of the
HPP (B/D – HPP)
• expand the understanding of the
human proteome with a focus on
expanding the understanding of
each and every gene on each
chromosome.
C-HPP PROGRESS TO
DATE
completed
proteins
(175008)
proteins
remaining
(2579)
• expand the understanding of the
human proteome with a focus on
important biology research aspects
and ongoing disease-focused
research.
OUTCOME OF
THE PROJECT
-lists of proteins relevant to several different diseases and
biological systems and have made them publicly accessible,
including popular protein lists for cardiovascular, cerebral,
hepatic, renal, pulmonary, and intestinal systems.
-By characterizing all 20,300 genes of the known genome, the
Human Proteome Project will generate the map of the protein
based molecular architecture of the human body.
enhance understanding of human biology at the cellular level
and lay a foundation for development of diagnostic, prognostic,
therapeutic, and preventive medical applications
HUMAN BRAIN PROJECT
STARTED ON
October 2013
EXPECTED
YEAR OF
COMPLETION
2023
OBJECTIVES
-to have a better understanding of the structure and
organisation of the human brain.
-Gather, organise and disseminate data describing the
brain and its diseases
-to simulate the brain
-Develop brain-inspired computing, data analytics and
robotics
http://www.nature.com/news/neuroscienc
e-where-is-the-brain-in-the-human-
brain-project-1.15803
BRAIN MAPPING PROJECT
STARTED ON April 2014
EXPECTED
YEAR OF
COMPLETION
2025
OBJECTIVES
-uncover the mysteries of brain disorders, such
as Alzheimer's and Parkinson’s diseases, depression,
and traumatic brain injury.
- to record the activities of millions of neurons
simultaneously along with behaviour.
SIGNIFICANCE
• Generate numerous data regarding the genes and variations
• Helps to understand the role of individual genes and its association with diseases
• Helps to intensify the research efforts to explore the gene function
• Diseases could be easily identified since proteins are biomarkers.
CONCLUSION
REFERENCES
• LeoryHood and Lee Rowen., Human genome project: big science that transforms biologyand
medicine.,genome medicine.,2013, U.S.A
• Hongzhuqu.,Xiandong Fang., Brief review on ENCODE project., Genomics proteomics
bioinformatics.,11(2013) 135-141.
• HapMap project.,International hapmap consortium.,Nature., vol 426.,2003
• Pierre Legrain., Human proteome project:current state and future directions.,Molecular and cellular
proteomics .,2011., 10.1074/mcp.M1.0993-1
• The ENCODE Project Consortium., Identification and analysis of functional elements in 1% of the
human genome by the ENCODE pilot project., Vol 447| 14 June 2007| doi:10.1038/nature05874
• https://hupo.org/C-HPP
• https://hupo.org/human-proteome-project
• https://hupo.org/B/D-HPP
• https://www.humanbrainproject.eu/en/science/overview/
• http://www.nature.com/news/neuroscience-where-is-the-brain-in-the-human-brain-project-1.15803
• https://www.technologyreview.com/s/513011/why-obamas-brain-mapping-project-matters/
Post human genome project

Post human genome project

  • 2.
    POST HUMAN GENOME PROJECT PRESENTEDBY, D.IRENE 16PGZ001 M.Sc. Zoology, Lady Doak College, Madurai
  • 3.
    OBJECTIVES ESTIMATED TIME ORGANIZATION S INVOLVED To sequencethe human genome, identify genes and describe their function 15 years (1985-2003) costing 3 billion dollars International consortium of 20 research groups and Celera genomics OVERVIEW OF HUMAN GENOME PROJECT
  • 4.
  • 5.
  • 6.
    PROJECTS AFTER HGP •HapMap project • ENCODE project • Human Proteome project • European Commission’s Human Brain Project • Brain Mapping Project
  • 8.
    HapMap PROJECT OBJECTIVES -To determinecommon sequence variation -Frequency To understand patterns of common genetic diversity STARTED ON 2005 COMPLETED ON 27th October 2002
  • 9.
    SAMPLES AND POPULATIONS 45 samples90 samples 45 samples 90 samples
  • 10.
    OUTCOME OF THE PROJECT -Theproject data are freely available -Useful for research community -0.1% variation is also characterized
  • 12.
  • 13.
    STARTED ON September2003 EXPECTED YEAR OF COMPLETION 2017 OBJECTIVES -provide a more biologically informative representation of the human Genome -To determine the role of ‘junk DNA’
  • 14.
    OUTCOME OF THE PROJECT -80.4%of human genome had functions in at least 1 cell type -integrated with SNP’s to study complex diseases Showed that ‘junk DNA’ has some function (regulome) -provided novel aspects of gene expression and regulation which enhanced the understanding of human genome and human health and diseases.
  • 15.
  • 16.
    HUMAN PROTEOME PROJECT STARTEDON September 23, 2010 OBJECTIVES -to map the entire human proteome in a systematic effort using currently available and emerging techniques. EXPECTED YEAR OF COMPLETION 2020
  • 18.
    HUMAN PROTEOME PROJECT Chromosome-based Human ProteomeProject (C-HPP) Biology and Disease- Driven Groups of the HPP (B/D – HPP) • expand the understanding of the human proteome with a focus on expanding the understanding of each and every gene on each chromosome. C-HPP PROGRESS TO DATE completed proteins (175008) proteins remaining (2579) • expand the understanding of the human proteome with a focus on important biology research aspects and ongoing disease-focused research.
  • 19.
    OUTCOME OF THE PROJECT -listsof proteins relevant to several different diseases and biological systems and have made them publicly accessible, including popular protein lists for cardiovascular, cerebral, hepatic, renal, pulmonary, and intestinal systems. -By characterizing all 20,300 genes of the known genome, the Human Proteome Project will generate the map of the protein based molecular architecture of the human body. enhance understanding of human biology at the cellular level and lay a foundation for development of diagnostic, prognostic, therapeutic, and preventive medical applications
  • 20.
    HUMAN BRAIN PROJECT STARTEDON October 2013 EXPECTED YEAR OF COMPLETION 2023 OBJECTIVES -to have a better understanding of the structure and organisation of the human brain. -Gather, organise and disseminate data describing the brain and its diseases -to simulate the brain -Develop brain-inspired computing, data analytics and robotics http://www.nature.com/news/neuroscienc e-where-is-the-brain-in-the-human- brain-project-1.15803
  • 21.
    BRAIN MAPPING PROJECT STARTEDON April 2014 EXPECTED YEAR OF COMPLETION 2025 OBJECTIVES -uncover the mysteries of brain disorders, such as Alzheimer's and Parkinson’s diseases, depression, and traumatic brain injury. - to record the activities of millions of neurons simultaneously along with behaviour.
  • 22.
    SIGNIFICANCE • Generate numerousdata regarding the genes and variations • Helps to understand the role of individual genes and its association with diseases • Helps to intensify the research efforts to explore the gene function • Diseases could be easily identified since proteins are biomarkers.
  • 23.
  • 24.
    REFERENCES • LeoryHood andLee Rowen., Human genome project: big science that transforms biologyand medicine.,genome medicine.,2013, U.S.A • Hongzhuqu.,Xiandong Fang., Brief review on ENCODE project., Genomics proteomics bioinformatics.,11(2013) 135-141. • HapMap project.,International hapmap consortium.,Nature., vol 426.,2003 • Pierre Legrain., Human proteome project:current state and future directions.,Molecular and cellular proteomics .,2011., 10.1074/mcp.M1.0993-1 • The ENCODE Project Consortium., Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project., Vol 447| 14 June 2007| doi:10.1038/nature05874 • https://hupo.org/C-HPP • https://hupo.org/human-proteome-project • https://hupo.org/B/D-HPP • https://www.humanbrainproject.eu/en/science/overview/ • http://www.nature.com/news/neuroscience-where-is-the-brain-in-the-human-brain-project-1.15803 • https://www.technologyreview.com/s/513011/why-obamas-brain-mapping-project-matters/

Editor's Notes

  • #2 abt the testing of blood grp, hb level Wat abt genome seq. proteins in body,and neuron maps Can they b tested?? Will it be available in future? That s the hot topic for todays presenation
  • #9 Common patterns are snp, vntr, str, microsatellites, minisatellites
  • #21 Initially exciting proposal to integrate IT and neuroscience Later contradictions developed
  • #22 -first phase 302 neurons of drosophila with 7000 connections, imagine humans? Then zebra fish, mice, chimpanzee then human
  • #24 -new era , new technologies, new discoveries, research's are being more precise and specific One day can cure cancer , HIV , better diagnostics . -even though technologies and techniques are being developed. Nobody could decipher the mechanism and intricacy of the genome 100%. There will always remain a mystery in the field of science.