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International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 07 Issue: 04 | Apr 2020 www.irjet.net p-ISSN: 2395-0072
© 2020, IRJET | Impact Factor value: 7.34 | ISO 9001:2008 Certified Journal | Page 109
Brain Tumor Detection using Image Processing, ML & NLP
Mrs. Madhuri Gurale1, Mr. Vishal Bhan2, Nilesh Tayde3, Pritam Shejul4, Shubham Gaikwad5
1Assistant Professor, Department of IT Engineering, D.Y. Patil College Of Engineering, Akurdi, Pune
2, 3, 4,5Undergraduate Students Dept. Information Technology, D.Y. Patil College of Engineering, Akurdi, Pune
---------------------------------------------------------------------***----------------------------------------------------------------------
Abstract - It is very difficult for doctors todetectbraintumors
at its earlier stages because they are more directed to noise
and other environmental interference. This system isdesigned
make things easy and the brain tumor detection process more
efficient. To proceed with the implementation of the system
filtering is applied to eliminate irrelevant and image is
converted into a grayscaleimage. Machinelearningand image
processing algorithms will be applied on the image by the
system to get required output. One of the issues with MRI
images is that the edges of the MRI images are not sharp
during the early stage of brain tumor. So, we can use Image
segmentation on MRI images to detect edges. To improve
accuracy and efficiencyofthe systemotherfilteringtechniques
could be applied
Key Words: Image Processing, Filtering, MRI, Machine
Learning.
1. INTRODUCTION
In the recent times, due to the technological improvements
in the field of medical sciences, patients are getting better
healthcare facilities. This research or study addresses the
problems of detection of brain tumors usingMRIimagesand
converts the manual process into an automatic one.
When cancerous cells grow unmanageably in brain it is
known as Brain Tumor. A brain tumor can be either benign
or malignant. The benign brain tumorisuniforminstructure
and does not contain active i.e. cancer cells, whereas
malignant brain tumors arenon-uniform(heterogeneous)in
structure and contain active cells. The gliomas and
meningiomas are the examples of low-grade tumors,
classified as benign tumors and glioblastoma and
astrocytoma are a class of high-grade tumors, classified as
malignant tumors.
World Health Organization (WHO) and ABT Association [1]
use grades (I to IV) to classify tumors as benign tumors or
malignant tumors. Usingthe above-mentionedgradingscale,
grade [I, II] gliomas are classified as benign tumors or low-
grade tumor types that possessa slowgrowth rateandgrade
[III, IV] gliomas as malignant tumors also known as high-
grade tumors that possess rapid growth rate. Ifsomeonehas
In order to remove tumor accurately, information has to be
precisely extracted from MRI. Using this system, we will get
accurate features of the tumor from the MRI and that will
help the patients and the doctors during treatment.
2. LITERATURE SURVEY
Alfonse and Salem [2] have done automatic classification of
MR images of brain tumor using SVM-based classifier. In
order to improve the efficiency of the classifier, FFT (Fast-
Fourier-Transform) isusedforfeature extractionandMRMR
(Minimal-Redundancy-Maximal-Relevance) is used for
feature reduction to decrease complexity. They achieved an
accuracy of 98.9% using this method.
Kong al. [3] used autonomous segmentation of tissues and
brain parts from MRI using future selection discriminative
clustering method. Demirhan et al. [4] introduced an
algorithm for tissue segmentation using neural networks
and wavelets, which gives effective division of brain
Magnetic Resonance Images into the tumor, White and Grey
Matter, etc.
Kumar and Vijayakumar [5] have introduced brain tumor
classification and segmentation grounded on radial basis
function and PCA and has likeness index of 96.20%, overlap
fraction is equal to 95%, and an extra fraction of 0.025%.
3. ARCHITECTURE
Steps used in proposed algorithm are.
3.1 Preprocessing: The main functionofpreprocessingisto
boost the quality of MR images and to fabricate it
appropriately for further processing by humanandmachine
systems. Also, preprocessing helps to enhance specific
parameters of MR images like the Signal-Noise ratio. By
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 07 Issue: 04 | Apr 2020 www.irjet.net p-ISSN: 2395-0072
© 2020, IRJET | Impact Factor value: 7.34 | ISO 9001:2008 Certified Journal | Page 110
improving the visual appearance of MR images and by
withdrawing the unnecessary noiseandundesiredpartsand
further making inner region smoother and preserving its
edges for enhancement of SNR and for raw MR images
clarity, we approach the adaptive improvements.
3.2. Skull Stripping: For biomedical analysis,skull stripping
is the fundamental process and it is significant for the
effective testing of brain tumor from Magnetic Resonance
Images. Brain skull stripping is basically the procedure of
eliminating tissue other than brain tissues from the brain
images. With the help of brain skull stripping, additional
cerebral tissues like fat, skin and skull can be removedinthe
brain images. There are various methods available for brain
skull stripping such as automatic skull stripping, skull
stripping based on segmentation, brain skull strippingusing
histogram analysis. This project uses threshold operation-
based brain skull stripping to remove tissues.
3.3. Segmentation: The fragments of the brain MRI regions
can be attained through the following stages: At first, binary
image is formed by converting the preprocessed MR image
with threshold of 128 is selected. The pixel values are
selected which are greater than the threshold and are
further mapped to white and others marked as black;
because of this, various regions are formed near the tumor
tissues, which can be cropped out. In furtherstep,an erosion
operation of morphology is employed to eliminate white
pixel. Finally, the division is made into two parts mainly of
the eroded region and the original image. The rest black
region extracted from erode operation is named as a brain
MRI mask.
3.4 Feature Extraction Using feature extraction technique,
we can get important information about the tumor like
shape, size, texture and contrast. The analysis of texture is
important for visual perception of humans and also for the
machine learning system. Itisusedeffectivelytoimprove the
accuracy of this system by selecting some features.
(1) Mean (M): When we add all the values of pixels and then
divide it by total pixels present in that image, we get the
mean value.
(2) Standard-Deviation: It describes the distribution of
values from the mean and measures inhomogeneity. Higher
Standard Deviation means good contrast on the edges of an
MR image.
(3) Entropy (E): The randomness ofanytextual imagecan be
characterized by Entropy.
(4) Skewness: To know if either symmetry exists or not, we
can use Skewness.
(5) Kurtosis: A random variable’s shape of probability
distribution can be explained with an attribute known as
Kurtosis.
(6) Energy: The amount that can be quantified as the
magnitude of PPR(Pixel-Pair-Repetitions) is known as
Energy. It is a parameter to measure similarity present in an
image.
(7) Contrast- Contrast is a testing of intensity pixels overthe
MRI image.
(8) Inverse Difference Moment: It is testing or measuring of
the local homogeneity of an image. It may have one or many
values that are used to know whether the MRI image is
textured or not.
(9) Directional Moment: It considers the orientation of the
image as a measure in terms of the angle.
(10) Correlation: To know about the spatial dependencies
between the pixels, correlation is used.
(11) Coarseness: Coarseness is testing or measure of
roughness in the texture of image analysis of an image. A
texture with a smaller number of textureelementsiscoarser
as compared to the one with a larger number.
4. CONCLUSION
In this research, we used ML algorithms and image
processing methods to extract data from the MRI. We used
preprocessing to upgrade the signal to noise(S/N) ratio and
to get rid of the effect of unwanted noise. Basedonthreshold
technique we used a skull strippingalgorithmtoenhance the
skull stripping performance. During this study, we analyzed
texture-based characteristic with a recognized classifier for
classifying brain tumorfrom MR Images.Fromtheoutcomes,
it's clear that the brain tumor identification is quick and
precise when put next with the manual identification
performed by clinical experts. The varied execution factors
also show that the suggested algorithm gives effectiveresult
by improving certain parameters like mean, MSE (Mean
Square Error), PSNR, accuracy, sensitivity, specificity, and
dice coefficient. Our outcomes show that the planned
approach can help within the timely and precisedetection of
brain tumor together with the recognition of its precise
location. Therefore, using ML and NLP the proposed system
is significant for brain tumor identificationfromMRIimages.
REFERENCES
[1] American Brain Tumor Association,
http://www.abta.org.
[2] M. Alfonse and A.-B. M. Salem, “An automatic
classificationofbraintumors throughMRIusingsupport
vector machine,” Egyptian Computer Science Journal,
vol. 40, pp. 11–21, 2016.
[3] Y. Kong, Y. Deng, and Q. Dai, “Discriminative clustering
and feature selection for brain MRI segmentation,”IEEE
Signal Processing Letters, vol. 22, no. 5, pp. 573–577,
2015.
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 07 Issue: 04 | Apr 2020 www.irjet.net p-ISSN: 2395-0072
© 2020, IRJET | Impact Factor value: 7.34 | ISO 9001:2008 Certified Journal | Page 111
[4] A. Demirhan, M. Toru, and I. Guler, “Segmentation of
tumor and edema along with healthy tissues of brain
using wavelets and neural networks,” IEEE Journal of
Biomedical and Health Informatics, vol. 19, no. 4, pp.
1451–1458, 2015.
[5] P. Kumar and B. Vijayakumar, “Brain tumour Mr image
segmentation and classification using by PCA and RBF
kernel based support vector machine,” Middle-East
Journal of Scientific Research, vol. 23, no. 9, pp. 2106–
2116, 2015.
[6] www.google.com

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IRJET - Brain Tumor Detection using Image Processing, ML & NLP

  • 1. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 07 Issue: 04 | Apr 2020 www.irjet.net p-ISSN: 2395-0072 © 2020, IRJET | Impact Factor value: 7.34 | ISO 9001:2008 Certified Journal | Page 109 Brain Tumor Detection using Image Processing, ML & NLP Mrs. Madhuri Gurale1, Mr. Vishal Bhan2, Nilesh Tayde3, Pritam Shejul4, Shubham Gaikwad5 1Assistant Professor, Department of IT Engineering, D.Y. Patil College Of Engineering, Akurdi, Pune 2, 3, 4,5Undergraduate Students Dept. Information Technology, D.Y. Patil College of Engineering, Akurdi, Pune ---------------------------------------------------------------------***---------------------------------------------------------------------- Abstract - It is very difficult for doctors todetectbraintumors at its earlier stages because they are more directed to noise and other environmental interference. This system isdesigned make things easy and the brain tumor detection process more efficient. To proceed with the implementation of the system filtering is applied to eliminate irrelevant and image is converted into a grayscaleimage. Machinelearningand image processing algorithms will be applied on the image by the system to get required output. One of the issues with MRI images is that the edges of the MRI images are not sharp during the early stage of brain tumor. So, we can use Image segmentation on MRI images to detect edges. To improve accuracy and efficiencyofthe systemotherfilteringtechniques could be applied Key Words: Image Processing, Filtering, MRI, Machine Learning. 1. INTRODUCTION In the recent times, due to the technological improvements in the field of medical sciences, patients are getting better healthcare facilities. This research or study addresses the problems of detection of brain tumors usingMRIimagesand converts the manual process into an automatic one. When cancerous cells grow unmanageably in brain it is known as Brain Tumor. A brain tumor can be either benign or malignant. The benign brain tumorisuniforminstructure and does not contain active i.e. cancer cells, whereas malignant brain tumors arenon-uniform(heterogeneous)in structure and contain active cells. The gliomas and meningiomas are the examples of low-grade tumors, classified as benign tumors and glioblastoma and astrocytoma are a class of high-grade tumors, classified as malignant tumors. World Health Organization (WHO) and ABT Association [1] use grades (I to IV) to classify tumors as benign tumors or malignant tumors. Usingthe above-mentionedgradingscale, grade [I, II] gliomas are classified as benign tumors or low- grade tumor types that possessa slowgrowth rateandgrade [III, IV] gliomas as malignant tumors also known as high- grade tumors that possess rapid growth rate. Ifsomeonehas In order to remove tumor accurately, information has to be precisely extracted from MRI. Using this system, we will get accurate features of the tumor from the MRI and that will help the patients and the doctors during treatment. 2. LITERATURE SURVEY Alfonse and Salem [2] have done automatic classification of MR images of brain tumor using SVM-based classifier. In order to improve the efficiency of the classifier, FFT (Fast- Fourier-Transform) isusedforfeature extractionandMRMR (Minimal-Redundancy-Maximal-Relevance) is used for feature reduction to decrease complexity. They achieved an accuracy of 98.9% using this method. Kong al. [3] used autonomous segmentation of tissues and brain parts from MRI using future selection discriminative clustering method. Demirhan et al. [4] introduced an algorithm for tissue segmentation using neural networks and wavelets, which gives effective division of brain Magnetic Resonance Images into the tumor, White and Grey Matter, etc. Kumar and Vijayakumar [5] have introduced brain tumor classification and segmentation grounded on radial basis function and PCA and has likeness index of 96.20%, overlap fraction is equal to 95%, and an extra fraction of 0.025%. 3. ARCHITECTURE Steps used in proposed algorithm are. 3.1 Preprocessing: The main functionofpreprocessingisto boost the quality of MR images and to fabricate it appropriately for further processing by humanandmachine systems. Also, preprocessing helps to enhance specific parameters of MR images like the Signal-Noise ratio. By
  • 2. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 07 Issue: 04 | Apr 2020 www.irjet.net p-ISSN: 2395-0072 © 2020, IRJET | Impact Factor value: 7.34 | ISO 9001:2008 Certified Journal | Page 110 improving the visual appearance of MR images and by withdrawing the unnecessary noiseandundesiredpartsand further making inner region smoother and preserving its edges for enhancement of SNR and for raw MR images clarity, we approach the adaptive improvements. 3.2. Skull Stripping: For biomedical analysis,skull stripping is the fundamental process and it is significant for the effective testing of brain tumor from Magnetic Resonance Images. Brain skull stripping is basically the procedure of eliminating tissue other than brain tissues from the brain images. With the help of brain skull stripping, additional cerebral tissues like fat, skin and skull can be removedinthe brain images. There are various methods available for brain skull stripping such as automatic skull stripping, skull stripping based on segmentation, brain skull strippingusing histogram analysis. This project uses threshold operation- based brain skull stripping to remove tissues. 3.3. Segmentation: The fragments of the brain MRI regions can be attained through the following stages: At first, binary image is formed by converting the preprocessed MR image with threshold of 128 is selected. The pixel values are selected which are greater than the threshold and are further mapped to white and others marked as black; because of this, various regions are formed near the tumor tissues, which can be cropped out. In furtherstep,an erosion operation of morphology is employed to eliminate white pixel. Finally, the division is made into two parts mainly of the eroded region and the original image. The rest black region extracted from erode operation is named as a brain MRI mask. 3.4 Feature Extraction Using feature extraction technique, we can get important information about the tumor like shape, size, texture and contrast. The analysis of texture is important for visual perception of humans and also for the machine learning system. Itisusedeffectivelytoimprove the accuracy of this system by selecting some features. (1) Mean (M): When we add all the values of pixels and then divide it by total pixels present in that image, we get the mean value. (2) Standard-Deviation: It describes the distribution of values from the mean and measures inhomogeneity. Higher Standard Deviation means good contrast on the edges of an MR image. (3) Entropy (E): The randomness ofanytextual imagecan be characterized by Entropy. (4) Skewness: To know if either symmetry exists or not, we can use Skewness. (5) Kurtosis: A random variable’s shape of probability distribution can be explained with an attribute known as Kurtosis. (6) Energy: The amount that can be quantified as the magnitude of PPR(Pixel-Pair-Repetitions) is known as Energy. It is a parameter to measure similarity present in an image. (7) Contrast- Contrast is a testing of intensity pixels overthe MRI image. (8) Inverse Difference Moment: It is testing or measuring of the local homogeneity of an image. It may have one or many values that are used to know whether the MRI image is textured or not. (9) Directional Moment: It considers the orientation of the image as a measure in terms of the angle. (10) Correlation: To know about the spatial dependencies between the pixels, correlation is used. (11) Coarseness: Coarseness is testing or measure of roughness in the texture of image analysis of an image. A texture with a smaller number of textureelementsiscoarser as compared to the one with a larger number. 4. CONCLUSION In this research, we used ML algorithms and image processing methods to extract data from the MRI. We used preprocessing to upgrade the signal to noise(S/N) ratio and to get rid of the effect of unwanted noise. Basedonthreshold technique we used a skull strippingalgorithmtoenhance the skull stripping performance. During this study, we analyzed texture-based characteristic with a recognized classifier for classifying brain tumorfrom MR Images.Fromtheoutcomes, it's clear that the brain tumor identification is quick and precise when put next with the manual identification performed by clinical experts. The varied execution factors also show that the suggested algorithm gives effectiveresult by improving certain parameters like mean, MSE (Mean Square Error), PSNR, accuracy, sensitivity, specificity, and dice coefficient. Our outcomes show that the planned approach can help within the timely and precisedetection of brain tumor together with the recognition of its precise location. Therefore, using ML and NLP the proposed system is significant for brain tumor identificationfromMRIimages. REFERENCES [1] American Brain Tumor Association, http://www.abta.org. [2] M. Alfonse and A.-B. M. Salem, “An automatic classificationofbraintumors throughMRIusingsupport vector machine,” Egyptian Computer Science Journal, vol. 40, pp. 11–21, 2016. [3] Y. Kong, Y. Deng, and Q. Dai, “Discriminative clustering and feature selection for brain MRI segmentation,”IEEE Signal Processing Letters, vol. 22, no. 5, pp. 573–577, 2015.
  • 3. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 07 Issue: 04 | Apr 2020 www.irjet.net p-ISSN: 2395-0072 © 2020, IRJET | Impact Factor value: 7.34 | ISO 9001:2008 Certified Journal | Page 111 [4] A. Demirhan, M. Toru, and I. Guler, “Segmentation of tumor and edema along with healthy tissues of brain using wavelets and neural networks,” IEEE Journal of Biomedical and Health Informatics, vol. 19, no. 4, pp. 1451–1458, 2015. [5] P. Kumar and B. Vijayakumar, “Brain tumour Mr image segmentation and classification using by PCA and RBF kernel based support vector machine,” Middle-East Journal of Scientific Research, vol. 23, no. 9, pp. 2106– 2116, 2015. [6] www.google.com