The term isolation refers to the separation of a strain from a natural, mixed population of living microbes, as present in the environment. It becomes necessary to maintain the viability and purity of the microorganism by keeping the pure culture free from contamination.
A pure culture theoretically contains a single bacterial species. There are a number of procedures available for the isolation of pure cultures from mixed populations. A pure culture may be isolated by the use of special media with specific chemical or physical agents that allow the enrichment or selection of one
organism over another.
The term isolation refers to the separation of a strain from a natural, mixed population of living microbes, as present in the environment. It becomes necessary to maintain the viability and purity of the microorganism by keeping the pure culture free from contamination.
A pure culture theoretically contains a single bacterial species. There are a number of procedures available for the isolation of pure cultures from mixed populations. A pure culture may be isolated by the use of special media with specific chemical or physical agents that allow the enrichment or selection of one
organism over another.
It gives the general knowledge about plant tissue culture. As this topic is an important aspects of plant biotechnology, it will remind a brief idea about why it is necessary.
Much faster rates of growth can be induced in vitro than by traditional means.
Multiplication of plants which are very difficult to propagate by cuttings or other traditional methods.
Production of large numbers of genetically identical clones in a short time
Seeds can be germinated with no risk of damping off/ predation.
Under certain conditions, plant material can be stored in vitro for considerable periods of time with little or no maintenance
Tissue culture techniques are used for virus eradication, genetic manipulation, somatic hybridization and other procedures that benefit propagation, crop improvement, and basic research.
By means of tissue culture it is possible to produce pathogen free plantlets by mass multiplication in a very limited amount of area from a very small sterile part of a mother plant. This method is also used to produce/ multiply plants that are to be transported across national border and so for their faster multiplication.But the establishment of a tissue culturing unit needs huge financial investments, skilled labors/technicians and required areas for its establishment are major constraints. Plant tissues grow and multiply in the labs only when there is an uncompetitive, growing condition with uninterrupted supply of nutrients.
Medium:
It contains all the elements that contribute the required nutrients that aid to the growth of the tissues; it is in liquid state or semi-solid in nature. The tissues are grown on the media. It consists of 95% of water, major and minor nutrients, plant growth hormones, vitamins, sugar rich compounds and chelating agents.
Totipotency:
It is the ability of a tissue or an organ of a plant to produce the whole plant, under the optional laboratory conditions and this is called as Totipotency. This is the baseline over which plant tissue culture relies upon.
Callus Culture:
When the cells divide into an undifferentiated mass it is called as callus. Any part of a plant can be used to produce the calli. It may be a stem, leaf, meristem or any other part. It is used to produce variations among the plantlets.
Suspension culture:
The callus produced from the explants are grown on nutrient solutions (that are semi solid) for a period of time and they are induced to produce plants with new traits.
Embryo Culture:
The method of culturing mature and immature embryos in media is called embryo culture. By this method, it is possible to produce plants from dormant seeds and seeds with metabolites that inhibit germination. This method is very important in crop improvement programs.
Somatic Embryogenesis:
When the plants are grown on nutrient media, calli are formed. When these calli are subjected to growth in cytokinin medium, somatic embryos are formed. They are circular, elongated,
Single cell culture
• As stated earlier, cells derived from a single cell through mitosis constitute a clone and the process of obtaining clones is called cloning (asexual progeny of a single individual make up.
Micropropagation and commercial exploitation in horticulture cropsDheeraj Sharma
Micro-propagation – principles and concepts, commercial exploitation in horticultural crops. Techniques - in vitro clonal propagation, direct organogenesis, embryogenesis, micrografting, meristem culture. Hardening, packing and transport of micro-propagules.
Pure Culture Technique
Culture : Act of cultivating microorganisms or the microorganisms that are cultivated.
Mixed culture : more than one microorganism
Pure culture : containing a single species of organism.
Common isolation techniques:
1. Streak plate method
2. Pour plate method
3. Spread plate method
4. Roll tube method
INVITRO CULTURE: TECHNIQUES, APPLICATIOSNS & ACHIEVEMENTS.
INVITRO TECHNIQUES AND BIOTECHNOLOGY USE IN AGRICULTURE AND CROP IMPROVEMENT. APPLICATIONS OF VARIOUS BIOTECHNOLOGICAL TECHNIQUES AND METHODS. TISSUE CULTURE, MICROPROPAGATION, EMBRYO CULTURE, ANTHER CULTURE, POLLEN CULTURE, ENDOSPERM CULTURE, OVULE CULTURE, OVARY CULTURE, ETC.
PLANT TISSUE CULTURE
K. Vanangamudi
History of plant tissue culture
Terms and terminology of plant tissue culture
Techniques of plant tissue culture
Stages of micro propagation
Diagrammatic representation of stages of micropropagation
Advantages of micro propagation
Demerits of micropropagation
Commercially propagated plants through micro propagation in India
Explants and medium used
The production of haploid plants exploiting the totipotency of microspore.
Androgenesis is the in vitro development of haploid plants originating from totipotent pollen grains through a series of cell division and differentiation.
It gives the general knowledge about plant tissue culture. As this topic is an important aspects of plant biotechnology, it will remind a brief idea about why it is necessary.
Much faster rates of growth can be induced in vitro than by traditional means.
Multiplication of plants which are very difficult to propagate by cuttings or other traditional methods.
Production of large numbers of genetically identical clones in a short time
Seeds can be germinated with no risk of damping off/ predation.
Under certain conditions, plant material can be stored in vitro for considerable periods of time with little or no maintenance
Tissue culture techniques are used for virus eradication, genetic manipulation, somatic hybridization and other procedures that benefit propagation, crop improvement, and basic research.
By means of tissue culture it is possible to produce pathogen free plantlets by mass multiplication in a very limited amount of area from a very small sterile part of a mother plant. This method is also used to produce/ multiply plants that are to be transported across national border and so for their faster multiplication.But the establishment of a tissue culturing unit needs huge financial investments, skilled labors/technicians and required areas for its establishment are major constraints. Plant tissues grow and multiply in the labs only when there is an uncompetitive, growing condition with uninterrupted supply of nutrients.
Medium:
It contains all the elements that contribute the required nutrients that aid to the growth of the tissues; it is in liquid state or semi-solid in nature. The tissues are grown on the media. It consists of 95% of water, major and minor nutrients, plant growth hormones, vitamins, sugar rich compounds and chelating agents.
Totipotency:
It is the ability of a tissue or an organ of a plant to produce the whole plant, under the optional laboratory conditions and this is called as Totipotency. This is the baseline over which plant tissue culture relies upon.
Callus Culture:
When the cells divide into an undifferentiated mass it is called as callus. Any part of a plant can be used to produce the calli. It may be a stem, leaf, meristem or any other part. It is used to produce variations among the plantlets.
Suspension culture:
The callus produced from the explants are grown on nutrient solutions (that are semi solid) for a period of time and they are induced to produce plants with new traits.
Embryo Culture:
The method of culturing mature and immature embryos in media is called embryo culture. By this method, it is possible to produce plants from dormant seeds and seeds with metabolites that inhibit germination. This method is very important in crop improvement programs.
Somatic Embryogenesis:
When the plants are grown on nutrient media, calli are formed. When these calli are subjected to growth in cytokinin medium, somatic embryos are formed. They are circular, elongated,
Single cell culture
• As stated earlier, cells derived from a single cell through mitosis constitute a clone and the process of obtaining clones is called cloning (asexual progeny of a single individual make up.
Micropropagation and commercial exploitation in horticulture cropsDheeraj Sharma
Micro-propagation – principles and concepts, commercial exploitation in horticultural crops. Techniques - in vitro clonal propagation, direct organogenesis, embryogenesis, micrografting, meristem culture. Hardening, packing and transport of micro-propagules.
Pure Culture Technique
Culture : Act of cultivating microorganisms or the microorganisms that are cultivated.
Mixed culture : more than one microorganism
Pure culture : containing a single species of organism.
Common isolation techniques:
1. Streak plate method
2. Pour plate method
3. Spread plate method
4. Roll tube method
INVITRO CULTURE: TECHNIQUES, APPLICATIOSNS & ACHIEVEMENTS.
INVITRO TECHNIQUES AND BIOTECHNOLOGY USE IN AGRICULTURE AND CROP IMPROVEMENT. APPLICATIONS OF VARIOUS BIOTECHNOLOGICAL TECHNIQUES AND METHODS. TISSUE CULTURE, MICROPROPAGATION, EMBRYO CULTURE, ANTHER CULTURE, POLLEN CULTURE, ENDOSPERM CULTURE, OVULE CULTURE, OVARY CULTURE, ETC.
PLANT TISSUE CULTURE
K. Vanangamudi
History of plant tissue culture
Terms and terminology of plant tissue culture
Techniques of plant tissue culture
Stages of micro propagation
Diagrammatic representation of stages of micropropagation
Advantages of micro propagation
Demerits of micropropagation
Commercially propagated plants through micro propagation in India
Explants and medium used
The production of haploid plants exploiting the totipotency of microspore.
Androgenesis is the in vitro development of haploid plants originating from totipotent pollen grains through a series of cell division and differentiation.
Similar to In vitro cultivation of bryophytes .pptx (20)
Gliese 12 b: A Temperate Earth-sized Planet at 12 pc Ideal for Atmospheric Tr...Sérgio Sacani
Recent discoveries of Earth-sized planets transiting nearby M dwarfs have made it possible to characterize the
atmospheres of terrestrial planets via follow-up spectroscopic observations. However, the number of such planets
receiving low insolation is still small, limiting our ability to understand the diversity of the atmospheric
composition and climates of temperate terrestrial planets. We report the discovery of an Earth-sized planet
transiting the nearby (12 pc) inactive M3.0 dwarf Gliese 12 (TOI-6251) with an orbital period (Porb) of 12.76 days.
The planet, Gliese 12 b, was initially identified as a candidate with an ambiguous Porb from TESS data. We
confirmed the transit signal and Porb using ground-based photometry with MuSCAT2 and MuSCAT3, and
validated the planetary nature of the signal using high-resolution images from Gemini/NIRI and Keck/NIRC2 as
well as radial velocity (RV) measurements from the InfraRed Doppler instrument on the Subaru 8.2 m telescope
and from CARMENES on the CAHA 3.5 m telescope. X-ray observations with XMM-Newton showed the host
star is inactive, with an X-ray-to-bolometric luminosity ratio of log 5.7 L L X bol » - . Joint analysis of the light
curves and RV measurements revealed that Gliese 12 b has a radius of 0.96 ± 0.05 R⊕,a3σ mass upper limit of
3.9 M⊕, and an equilibrium temperature of 315 ± 6 K assuming zero albedo. The transmission spectroscopy metric
(TSM) value of Gliese 12 b is close to the TSM values of the TRAPPIST-1 planets, adding Gliese 12 b to the small
list of potentially terrestrial, temperate planets amenable to atmospheric characterization with JWST.
FAIRSpectra - Towards a common data file format for SIMS imagesAlex Henderson
Presentation from the 101st IUVSTA Workshop on High performance SIMS instrumentation and machine learning / artificial intelligence methods for complex data.
This presentation describes the issues relating to storing and sharing data from Secondary Ion Mass Spectrometry experiments, and some potential solutions.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
This report details the geological observations and interpretations made during a field investigation of the Kaptai Rangamati road-cut section, located in southeastern Bangladesh. The purpose of this report is to document the exposed rock units, their characteristics, and the geological structures present within the road cut.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Nutrition is the science that deals with the study of nutrients and their role in maintaining human health and well-being. It encompasses the various processes involved in the intake, absorption, and utilization of essential nutrients, such as carbohydrates, proteins, fats, vitamins, minerals, and water, by the human body.
2. BRYOPHYTES
• Bryophytes are second largest group of land plants.
• Rich in terpenoids, phenols, glycosides and fatty acids.
• Bryophytes can be used to produce medicines but does not have
enough quantities of same species.
• In-vitro cultivation of bryophytes is the most appropriate way of
large biomass production and isolate numerous useful
compounds showing biological activities.
• In-vitro cultivation not only used in cellular, developmental
and molecular research.
• Also show vital role in juvenile stages in reproductive biology.
3. IN-VITRO CULTURE TECHNIQUE
Cultures, initiated from surface sterilized spores, gemmae or
vegetative fragments.
Are handled easily in petri-dishes on media containing
inorganic salts.
Soldification of medium with phytogel or gelrite.
Dilution of nutrients are beneficial to the growth of some taxa.
4. In-vitro culture technique cont…
• Prior knowledge of seasonality of sporophytic production is
vital for establishing cultures from spores.
• Period of spore availability can be increased by storing ripe
capsules at 4 degree celsius.
• Irradiances in culture are sufficient for good growth.
• Temperature above 25 degree celsius are damaging.
• Cryopreservation techniques are being developed for long term
preservation of endangered taxa.
• In-vitro cultivation of hepatics and hornworts are complicated
by presence of fungal and cyanobacterial endophytes.
5. OBJECTIVES OF IN-VITRO CULTURE
OF BRYOPHYTES
• Further understanding cellular, genetic and molecular basis for
morphogenesis embracing phenomina such as tip growth,
gravitropism and mode of action of growth regulators.
• Elucidating roles of juvenile stages, particularly moss
protenemata and propagules they produce.
• Assessing significance of juvenile characters in systematics and
phylogeny.
• Maintaining rare and endangered taxa for their conservation,
cryopreservation and genetic analysis.
• To determine functional and ecological significance of fungal
and cyanobacterial association in hepatics and hornworts.
6.
7. BASIC HARDWARE AND SOFTWARE
A. Culture vessels
• Disposable petri dishes are more convenient for maintainig
bryophyte culture.
• Where sporophytes, which exceed height of deepest dishes are
required-plants will be grown in test tubes or boiling tubes.
• Petri dish cultures dry out in 4-6 weeks.
• Their lonevity may be extended by ringing with parafilm.
• This may change morphology and growth rate of plants.
• Sealing of culture with micropore tape allows gaseous exchange
and increase rate of drying.
• Thus produces more natural protonemal growth.
8. Basic hardware and softwares
B. Light and temperature
• Most bryophytes, be they tropical, temperate or high latitude
will grow in-vitro with temperature 5-25 degree celsius.
• For tropical taxa- 20 to 25 degree celsius optimal.
• Those from cooler places-10 to 15 or at 5 to 10 degree celsius.
• Prevention of overheating is crucial.
• Temperature higher than 30 degree celsius –for a short period
can be fatal to most taxa.
9. Basic hardwares and softwares
C. Media
• Organic supplements may stimulate development and sugars
can be used in some taxa.
• It replace light requirement for growth.
• Dark-grown protenemal cultures –essential prerequisite for
gravitropism studies.
• Auxins –to stimulate regeneration from tissue fragments.
• Cytokinins-induce bud formation.
• Abscisic acid-induce protonemal brood cells.
10. Media cont...
• In higher plants- callus formation induced using media
containing sugar, growth regulators and coconut milk.
• Increase in ph and accumulation of metabolites-lead to death of
cultures.
• Agar are commonly used.
• Recently, phytogel or gelrite are widely used.
Advantages of gelrite over agar:
i) lack of organic compounds.
ii) being completely clear when solid.
iii) allow easy observation of samples and signs of
contaminations.
11. Media cont…
Disadvantages of gelrite over agar:
i) gelrite require cations to soldify.
ii) water in gelrite soldified medium is loosely bound.
iii) results in loss of structure over time and medium
become liquified.
12. SOURCES OF MATERIALAND
STERILIZATION PROTOCOLS
• Culture- surface sterilized for 1-2 min in either 1.5% sodium
hypochlorite.
• Contain a drop of detergent as wetting agent or sodium
dichloroisocyanurate (NaDCC).
• NaDCC- effective against vegetative bacteria, bacterial spores,
fungi, algae, protozoa and viruses.
• NaDCC- reduce effectiveness of sterilization resulting tissue
death.
• Thus not used in sterilizing solutions.
13. TECHNIQUE
1) Collect bryophytes plants with or without sporophytes.
2) Collect plants with healthy immature sporophytes that contain
spores.
3) Wash them thoroughly in running tap water for 5 min.
4) Surface sterilize unopened sporophytes in 10-19% sodium
hypochlorite solution and 8% active chlorine for 5-10 min.
5) Time can vary depending on species.
6) Rinse them 3 times in cold, sterile distilled water for 5 min.
7) Open sporophytic capsules aseptically.
8) Transfer spores with a sterile needle to petri dish containing
20ml solid nutrient MS medium.
14. Technique cont…
9) MS media contain micro and macro salts, without sugar, and
phytohormones, pH-6.0.
10) Incubate cultures at 25+/- 2 degree celsius for 1-3 week in
long day conditions.
11) Within 1-3 week spores start germination.
12) Protonema – develop on same media within 1-4 week.
15. Tehnique cont..
When plants are collected without sporophytes:
1) Take apical shoots of plants.
2) Remove them from soil.
3) Wash them thoroughly in running water for 30 min.
4) Surface sterilize small gametophyte apical shoots in 7-10%
sodium hypochlorite solution containing few drops of liquid
soap for 5 min.
5) Concentration of sodium hypochlorite vary depending of
species.
6) Thus for sterilization , use different commercial bleach
solutions.
16. Tehnique cont…
7) Rinse sterilized apical shoots 3 times in cold, sterile distilled
water.
8)Transfer 10-20 apical shoots using sterile forceps to petri
dishes containing 20ml MS medium.
9) Incubate culture at 25+/-2 degree celsius for 4-8 week in long
day.
10) Protonema develop on same medium within 4 weeks.