SlideShare a Scribd company logo
FRAGMENTATION TECHNIQUES IN MASS
SPECTROSCOPY
Presented by:
Sk.Samiya,
1st year M-Pharm,(Pharmacology)
Hindu College of Pharmacy
Mass spectroscopy
Definition:
It is a powerful analytical technique useful for determination of
molecular weight of compound.
Principle:
 Initially in mass spectroscopy the sample must be converted into
vapourised or gaseous form then it undergo ionization to form a
molecular ion with the liberation of 1e-.
 This molecular ion normally undergoes fragmentation to form several
fragmented ions or daughter ions.
FRAGMENTATION
 The process of breaking up of molecular ion into smaller or daughter
ions is known as “fragmentation”.
 The molecular ion commonly decomposes to a pair of fragments,
which may be either a radical with an ion or a small molecule & a
radical cation.
Fragmentation process
 Bombardment of molecules by a electron beam with energy
between 10-15ev usually results in the ionization of molecules
by removal of one electron (molecular ion formation).
 When the energy of electron beam is increased between 50-7ev,
these molecular ions acquire a high excitation resulting in their
break down into various fragments.
General modes of fragmentation
Fragmentation of the molecular ion takes place in following mods:
 Simple cleavage
1. Homolytic cleavage
2. Heterolytic cleavage
3. Semi heterolytic cleavage
 Rearrangement reactions
1. Elimination reactions
2. Ortho reaction
3. Mc-lafferty rearrangement
Simple cleavage:
Transfer of electrons takes place
1. Homolytic cleavage
 In hemolytic cleavage the electrons are equally transferred to both
atoms & it forms radical and cation.
R
H2C
CH
CH2
R
H2C
CH
CH2
R
+
CH
HC
CH2
IONISATION
HOMOLYTIC
CLEAVAGE
2. Heterolytic cleavage
 Fragmentation by movement of two electrons:
 In this type of cleavage both the electrons of the bond are taken over
by one of the atoms; the fragments are an even electron cation and a
radical with the positive charge residing on the alkyl group.
C4H9I
ionisation
CH3
CH2
+ I
C4H9I
HETEROLYTIC
CLEAVAGE
3.Semi heterolytic cleavage
 In this one electron bond cleavage takes place resulting in formation
of radical & cation.
C
H
H H
H
C
H
H H
H
CH3
+
H
IONISATION CLEAVAGE
Rearrangement reaction
 It involves the cleavage of bonds and formation of new bonds i.e., it
requires changes to at least two bonds.
 So the produced ions are not structural units of precursors.
 Generally rearrangement leads to loss of smaller molecules.
1. Elimination reaction
 In his fragmentation hydrogen is obstructed by hydroxyl group or
halogen or acetate functional groups results in the elimination of water
or neutral molecule.
R – CH2 – CH2 –CH2 R – CH2 – CH2 – CH2 +
OCOCH3 OCOCH3
CH3COOH + R – CH2 – CH = CH2
2. Ortho effect reaction
 In the case of substituted aromatic compounds the substitute & carbon come into
proximity has help in elimination of neutral molecule. This effect is called ortho
effect.
O
O
CH3
CH3
O
O
CH3
C
H2
C
O
CH2
+
OCH3
H
C
C
C
O
CH2
+ CH3OH
methyl 2-methylbenzoate
methyl 2-methylbenzoate ion
(6-methylenecyclohexa-2,4-
dienylidene)methanone
H
3. Mc-Lafferty rearrangement reaction
 The loss of an alkene fragment by cyclic rearrangement of a carbonyl
compounds ( like aldehyde, ketones, acids, esters, amines),
unsaturated compounds with γ-hydrogens undergo Mc-Lafferty
rearrangement.
Or
 It involves the migration of γ-hydrogen atom followed by cleavage
of β-bond then rearrangement leads to the elimination of neutral
molecule.
Mechanism
Fragmentation takes place only at γ-hydrogen
Then this hydrogen is obstructed by oxygen of carbonyl group or
unsaturated compound.
Carbonyl group is converted to hydroxyl group
Bond break down between α & β carbons resulting in liberation of 2e-’s
then rearrangement takes place to form a simple alkene.
H
H2C
C
H2
CH2
C
HO
butyraldehyde
H
H2C
C
H2
CH2
C
HO
H2C
C
H
CH
C
HHO
CH2
CH2
+
OH
C
CH2
H
O
C
CH3
H
H
H2C
C
H2
CH2
C
HO
IONISATION
EXAMPLE: Aldehyde
If m/z value is 44(24+4+16) that indicates aldehyde is present and connected to C3 chain.
H
H2C
C
H2
CH2
C
CH3O
H
H2C
C
H2
CH2
C
CH3O
H2C
C
H
CH2
CH
CH3HO
CH2
CH2
+
CH2
C
CH3HO
CH3
C
CH3O
H
H2C
C
H2
CH2
C
CH3
O
pentan-2-one
ionisation
If m/z value is 58 (36+16+6) that indicates the compound containing ketone group
attached to C3 chain
Ex:- ketone
H
H2C
C
H2
CH2
C
NH2O
H
H2C
C
H2
CH2
C
NH2O
H2C
C
H
CH2
CH
NH2HO
CH2
CH2
+
CH2
C
NH2HO
CH3
C
NH2O
butyramide
H
H2C
C
H2
CH2
C
NH2O
ionisation
Ex:-Amides
If m/z value is 59 (24+16+14+5) that indicates the compound containing amide group
attached to C3chain
REFERENCES:
 Instrumental methods of chemical analysis- B.K Sharma,
 Instrumental methods of analysis By Chatwal,
 Principles of Instrumental analysis By Donglas Skoog
Fragmentation techniques

More Related Content

What's hot

C-13 NMR Spectroscopy
C-13 NMR SpectroscopyC-13 NMR Spectroscopy
C-13 NMR Spectroscopy
MANISHSAHU106
 
MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...
MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...
MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...
Sachin Kale
 
C 13 NMR Spectroscopy
C 13 NMR SpectroscopyC 13 NMR Spectroscopy
C 13 NMR Spectroscopy
anjalibharat19
 
Mass Spectroscopy
Mass Spectroscopy Mass Spectroscopy
Mass Spectroscopy
Rahul Krishnan
 
Ionizaion Techniques - Mass Spectroscopy
Ionizaion Techniques - Mass SpectroscopyIonizaion Techniques - Mass Spectroscopy
Ionizaion Techniques - Mass Spectroscopy
Suraj Choudhary
 
Fragmentation rules mass spectroscopy
Fragmentation rules mass spectroscopyFragmentation rules mass spectroscopy
Fragmentation rules mass spectroscopy
Santhosh Kalakar dj
 
Spin spin coupling and coupling constant
Spin spin coupling and coupling constantSpin spin coupling and coupling constant
Spin spin coupling and coupling constant
Himal Barakoti
 
NMR SPECTROSCOPY
NMR SPECTROSCOPYNMR SPECTROSCOPY
NMR SPECTROSCOPY
VidyaNani
 
Factors affecting chemical shift
Factors affecting chemical shiftFactors affecting chemical shift
Factors affecting chemical shift
Taher Patel
 
Chemical shift
Chemical shiftChemical shift
Chemical shift
Arantha Jessy Joseph
 
Mc lafferty rearrangement
Mc lafferty rearrangementMc lafferty rearrangement
Mc lafferty rearrangement
Mahendra G S
 
IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...
IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...
IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...
Dr. UMESH KUMAR SHARMA
 
Mass spectroscopy
Mass spectroscopyMass spectroscopy
Mass spectroscopy
Akshay Sharma
 
UV-Visible Spectroscopy
UV-Visible SpectroscopyUV-Visible Spectroscopy
UV-Visible SpectroscopySudha Reddy
 
Mass Spectroscopy
Mass SpectroscopyMass Spectroscopy
Mass Spectroscopy
AmrutaSambrekar
 
Coupling constant
Coupling constantCoupling constant
Coupling constant
harshiniyadav1
 
NMR applications
NMR applicationsNMR applications
NMR applications
ArpitSuralkar
 
PRINCIPLES of FT-NMR & 13C NMR
PRINCIPLES of FT-NMR & 13C NMRPRINCIPLES of FT-NMR & 13C NMR
PRINCIPLES of FT-NMR & 13C NMR
Aditya Sharma
 

What's hot (20)

C-13 NMR Spectroscopy
C-13 NMR SpectroscopyC-13 NMR Spectroscopy
C-13 NMR Spectroscopy
 
MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...
MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...
MASS SPECTROSCOPY ( Molecular ion, Base peak, Isotopic abundance, Metastable ...
 
C 13 NMR Spectroscopy
C 13 NMR SpectroscopyC 13 NMR Spectroscopy
C 13 NMR Spectroscopy
 
Mass Spectroscopy
Mass Spectroscopy Mass Spectroscopy
Mass Spectroscopy
 
Ionizaion Techniques - Mass Spectroscopy
Ionizaion Techniques - Mass SpectroscopyIonizaion Techniques - Mass Spectroscopy
Ionizaion Techniques - Mass Spectroscopy
 
Fragmentation rules mass spectroscopy
Fragmentation rules mass spectroscopyFragmentation rules mass spectroscopy
Fragmentation rules mass spectroscopy
 
Spin spin coupling and coupling constant
Spin spin coupling and coupling constantSpin spin coupling and coupling constant
Spin spin coupling and coupling constant
 
NMR SPECTROSCOPY
NMR SPECTROSCOPYNMR SPECTROSCOPY
NMR SPECTROSCOPY
 
Factors affecting chemical shift
Factors affecting chemical shiftFactors affecting chemical shift
Factors affecting chemical shift
 
Chemical shift
Chemical shiftChemical shift
Chemical shift
 
NMR Spectroscopy
NMR SpectroscopyNMR Spectroscopy
NMR Spectroscopy
 
Mass spectroscopy
Mass spectroscopyMass spectroscopy
Mass spectroscopy
 
Mc lafferty rearrangement
Mc lafferty rearrangementMc lafferty rearrangement
Mc lafferty rearrangement
 
IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...
IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...
IR - Spectroscopy, theory, modes of vibration and sample handling. by Dr. Ume...
 
Mass spectroscopy
Mass spectroscopyMass spectroscopy
Mass spectroscopy
 
UV-Visible Spectroscopy
UV-Visible SpectroscopyUV-Visible Spectroscopy
UV-Visible Spectroscopy
 
Mass Spectroscopy
Mass SpectroscopyMass Spectroscopy
Mass Spectroscopy
 
Coupling constant
Coupling constantCoupling constant
Coupling constant
 
NMR applications
NMR applicationsNMR applications
NMR applications
 
PRINCIPLES of FT-NMR & 13C NMR
PRINCIPLES of FT-NMR & 13C NMRPRINCIPLES of FT-NMR & 13C NMR
PRINCIPLES of FT-NMR & 13C NMR
 

Viewers also liked

Ms 1
Ms 1Ms 1
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
Mussarat Abid
 
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
Solairajan A
 
Mass spectrometer
Mass spectrometerMass spectrometer
Mass spectrometer
venuakkanapally
 
Mass spectroscopy pdf
Mass spectroscopy  pdfMass spectroscopy  pdf
Mass spectroscopy pdf
hidayath unnisa
 
organic chemistry
organic chemistry organic chemistry
organic chemistry
pravesh kumar
 
organo clay studies
organo clay studies organo clay studies
organo clay studies
Sankhadip Das
 
(mass spectrometry chapter 29)
(mass spectrometry chapter 29)(mass spectrometry chapter 29)
(mass spectrometry chapter 29)
Bianca Mangin
 
Mass spectroscopy
Mass spectroscopyMass spectroscopy
Mass spectroscopy
Bahman Ramazani
 
Semisolid dosage form..
Semisolid dosage form..Semisolid dosage form..
Semisolid dosage form..Rabab Ambreen
 

Viewers also liked (12)

Ms 1
Ms 1Ms 1
Ms 1
 
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
 
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
 
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
 
Mass spectrometer
Mass spectrometerMass spectrometer
Mass spectrometer
 
Mass spectroscopy
Mass spectroscopyMass spectroscopy
Mass spectroscopy
 
Mass spectroscopy pdf
Mass spectroscopy  pdfMass spectroscopy  pdf
Mass spectroscopy pdf
 
organic chemistry
organic chemistry organic chemistry
organic chemistry
 
organo clay studies
organo clay studies organo clay studies
organo clay studies
 
(mass spectrometry chapter 29)
(mass spectrometry chapter 29)(mass spectrometry chapter 29)
(mass spectrometry chapter 29)
 
Mass spectroscopy
Mass spectroscopyMass spectroscopy
Mass spectroscopy
 
Semisolid dosage form..
Semisolid dosage form..Semisolid dosage form..
Semisolid dosage form..
 

Similar to Fragmentation techniques

Mass spectroscopy and fragmentation rule
Mass spectroscopy and fragmentation rule Mass spectroscopy and fragmentation rule
Mass spectroscopy and fragmentation rule
Zahid Wajdan
 
MS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdfMS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdf
Dr. Dinesh Mehta
 
MS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdfMS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdf
Dr. Dinesh Mehta
 
Fragmentation of important functional group- Alkane and corbonyl compounds
Fragmentation of important functional group- Alkane and corbonyl compoundsFragmentation of important functional group- Alkane and corbonyl compounds
Fragmentation of important functional group- Alkane and corbonyl compounds
Pravin176
 
organic chemistry leacture 01 uol.pptx
organic chemistry leacture 01   uol.pptxorganic chemistry leacture 01   uol.pptx
organic chemistry leacture 01 uol.pptx
AliRaza287845
 
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
Vaishali Jamdhade
 
Organic Intermediates
Organic IntermediatesOrganic Intermediates
Organic Intermediates
sapnam6
 
MASS-Fragmentation patterns, introduction, principles and applications
MASS-Fragmentation patterns, introduction, principles and applicationsMASS-Fragmentation patterns, introduction, principles and applications
MASS-Fragmentation patterns, introduction, principles and applications
nivedithag131
 
Reaction.pptx
Reaction.pptxReaction.pptx
Reaction.pptx
wadhava gurumeet
 
ORGANIC REACTIONS AND THEIR MECHANISMS
ORGANIC REACTIONS AND THEIR MECHANISMSORGANIC REACTIONS AND THEIR MECHANISMS
ORGANIC REACTIONS AND THEIR MECHANISMS
Protik Biswas
 
Photochemistry 1
Photochemistry 1Photochemistry 1
Photochemistry 1
irfan shah
 
Photochemistry 1
Photochemistry 1Photochemistry 1
Photochemistry 1
irfan shah
 
An overview of organic reaction mechanisms
An overview of organic reaction mechanismsAn overview of organic reaction mechanisms
An overview of organic reaction mechanisms
DrAparnaYeddala
 
Mass spectrometery
Mass spectrometeryMass spectrometery
Mass spectrometery
RaguM6
 
e3_ppt.pptx
e3_ppt.pptxe3_ppt.pptx
e3_ppt.pptx
Pathan Amanullakhan
 
isotope effect and fragmantation
isotope effect and fragmantationisotope effect and fragmantation
isotope effect and fragmantation
DevilRange
 
Therotical Organic Chemistry.pptx
Therotical Organic Chemistry.pptxTherotical Organic Chemistry.pptx
Therotical Organic Chemistry.pptx
wadhava gurumeet
 
MASS FRAGMENTATION.pptx
MASS FRAGMENTATION.pptxMASS FRAGMENTATION.pptx
MASS FRAGMENTATION.pptx
Tanvi Mhashakhetri
 
Fragmentation Pattern of Mass Spectrometry
Fragmentation Pattern of Mass SpectrometryFragmentation Pattern of Mass Spectrometry
Fragmentation Pattern of Mass Spectrometry
Ashwani Dhingra
 

Similar to Fragmentation techniques (20)

Mass spectroscopy and fragmentation rule
Mass spectroscopy and fragmentation rule Mass spectroscopy and fragmentation rule
Mass spectroscopy and fragmentation rule
 
MS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdfMS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdf
 
MS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdfMS Fragmentation Process and Application of MS.pdf
MS Fragmentation Process and Application of MS.pdf
 
Fragmentation of important functional group- Alkane and corbonyl compounds
Fragmentation of important functional group- Alkane and corbonyl compoundsFragmentation of important functional group- Alkane and corbonyl compounds
Fragmentation of important functional group- Alkane and corbonyl compounds
 
Mass spectrum
Mass spectrumMass spectrum
Mass spectrum
 
organic chemistry leacture 01 uol.pptx
organic chemistry leacture 01   uol.pptxorganic chemistry leacture 01   uol.pptx
organic chemistry leacture 01 uol.pptx
 
Mass spectrometry
Mass spectrometryMass spectrometry
Mass spectrometry
 
Organic Intermediates
Organic IntermediatesOrganic Intermediates
Organic Intermediates
 
MASS-Fragmentation patterns, introduction, principles and applications
MASS-Fragmentation patterns, introduction, principles and applicationsMASS-Fragmentation patterns, introduction, principles and applications
MASS-Fragmentation patterns, introduction, principles and applications
 
Reaction.pptx
Reaction.pptxReaction.pptx
Reaction.pptx
 
ORGANIC REACTIONS AND THEIR MECHANISMS
ORGANIC REACTIONS AND THEIR MECHANISMSORGANIC REACTIONS AND THEIR MECHANISMS
ORGANIC REACTIONS AND THEIR MECHANISMS
 
Photochemistry 1
Photochemistry 1Photochemistry 1
Photochemistry 1
 
Photochemistry 1
Photochemistry 1Photochemistry 1
Photochemistry 1
 
An overview of organic reaction mechanisms
An overview of organic reaction mechanismsAn overview of organic reaction mechanisms
An overview of organic reaction mechanisms
 
Mass spectrometery
Mass spectrometeryMass spectrometery
Mass spectrometery
 
e3_ppt.pptx
e3_ppt.pptxe3_ppt.pptx
e3_ppt.pptx
 
isotope effect and fragmantation
isotope effect and fragmantationisotope effect and fragmantation
isotope effect and fragmantation
 
Therotical Organic Chemistry.pptx
Therotical Organic Chemistry.pptxTherotical Organic Chemistry.pptx
Therotical Organic Chemistry.pptx
 
MASS FRAGMENTATION.pptx
MASS FRAGMENTATION.pptxMASS FRAGMENTATION.pptx
MASS FRAGMENTATION.pptx
 
Fragmentation Pattern of Mass Spectrometry
Fragmentation Pattern of Mass SpectrometryFragmentation Pattern of Mass Spectrometry
Fragmentation Pattern of Mass Spectrometry
 

Recently uploaded

MARUTI SUZUKI- A Successful Joint Venture in India.pptx
MARUTI SUZUKI- A Successful Joint Venture in India.pptxMARUTI SUZUKI- A Successful Joint Venture in India.pptx
MARUTI SUZUKI- A Successful Joint Venture in India.pptx
bennyroshan06
 
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
siemaillard
 
1.4 modern child centered education - mahatma gandhi-2.pptx
1.4 modern child centered education - mahatma gandhi-2.pptx1.4 modern child centered education - mahatma gandhi-2.pptx
1.4 modern child centered education - mahatma gandhi-2.pptx
JosvitaDsouza2
 
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXXPhrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
MIRIAMSALINAS13
 
Unit 2- Research Aptitude (UGC NET Paper I).pdf
Unit 2- Research Aptitude (UGC NET Paper I).pdfUnit 2- Research Aptitude (UGC NET Paper I).pdf
Unit 2- Research Aptitude (UGC NET Paper I).pdf
Thiyagu K
 
Unit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdfUnit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdf
Thiyagu K
 
GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...
GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...
GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...
Nguyen Thanh Tu Collection
 
Sha'Carri Richardson Presentation 202345
Sha'Carri Richardson Presentation 202345Sha'Carri Richardson Presentation 202345
Sha'Carri Richardson Presentation 202345
beazzy04
 
Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......
Ashokrao Mane college of Pharmacy Peth-Vadgaon
 
special B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdfspecial B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdf
Special education needs
 
Introduction to Quality Improvement Essentials
Introduction to Quality Improvement EssentialsIntroduction to Quality Improvement Essentials
Introduction to Quality Improvement Essentials
Excellence Foundation for South Sudan
 
Students, digital devices and success - Andreas Schleicher - 27 May 2024..pptx
Students, digital devices and success - Andreas Schleicher - 27 May 2024..pptxStudents, digital devices and success - Andreas Schleicher - 27 May 2024..pptx
Students, digital devices and success - Andreas Schleicher - 27 May 2024..pptx
EduSkills OECD
 
The approach at University of Liverpool.pptx
The approach at University of Liverpool.pptxThe approach at University of Liverpool.pptx
The approach at University of Liverpool.pptx
Jisc
 
Supporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptxSupporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptx
Jisc
 
Fish and Chips - have they had their chips
Fish and Chips - have they had their chipsFish and Chips - have they had their chips
Fish and Chips - have they had their chips
GeoBlogs
 
The geography of Taylor Swift - some ideas
The geography of Taylor Swift - some ideasThe geography of Taylor Swift - some ideas
The geography of Taylor Swift - some ideas
GeoBlogs
 
Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46
Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46
Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46
MysoreMuleSoftMeetup
 
The French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free downloadThe French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free download
Vivekanand Anglo Vedic Academy
 
Palestine last event orientationfvgnh .pptx
Palestine last event orientationfvgnh .pptxPalestine last event orientationfvgnh .pptx
Palestine last event orientationfvgnh .pptx
RaedMohamed3
 
Language Across the Curriculm LAC B.Ed.
Language Across the  Curriculm LAC B.Ed.Language Across the  Curriculm LAC B.Ed.
Language Across the Curriculm LAC B.Ed.
Atul Kumar Singh
 

Recently uploaded (20)

MARUTI SUZUKI- A Successful Joint Venture in India.pptx
MARUTI SUZUKI- A Successful Joint Venture in India.pptxMARUTI SUZUKI- A Successful Joint Venture in India.pptx
MARUTI SUZUKI- A Successful Joint Venture in India.pptx
 
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
 
1.4 modern child centered education - mahatma gandhi-2.pptx
1.4 modern child centered education - mahatma gandhi-2.pptx1.4 modern child centered education - mahatma gandhi-2.pptx
1.4 modern child centered education - mahatma gandhi-2.pptx
 
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXXPhrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
 
Unit 2- Research Aptitude (UGC NET Paper I).pdf
Unit 2- Research Aptitude (UGC NET Paper I).pdfUnit 2- Research Aptitude (UGC NET Paper I).pdf
Unit 2- Research Aptitude (UGC NET Paper I).pdf
 
Unit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdfUnit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdf
 
GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...
GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...
GIÁO ÁN DẠY THÊM (KẾ HOẠCH BÀI BUỔI 2) - TIẾNG ANH 8 GLOBAL SUCCESS (2 CỘT) N...
 
Sha'Carri Richardson Presentation 202345
Sha'Carri Richardson Presentation 202345Sha'Carri Richardson Presentation 202345
Sha'Carri Richardson Presentation 202345
 
Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......
 
special B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdfspecial B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdf
 
Introduction to Quality Improvement Essentials
Introduction to Quality Improvement EssentialsIntroduction to Quality Improvement Essentials
Introduction to Quality Improvement Essentials
 
Students, digital devices and success - Andreas Schleicher - 27 May 2024..pptx
Students, digital devices and success - Andreas Schleicher - 27 May 2024..pptxStudents, digital devices and success - Andreas Schleicher - 27 May 2024..pptx
Students, digital devices and success - Andreas Schleicher - 27 May 2024..pptx
 
The approach at University of Liverpool.pptx
The approach at University of Liverpool.pptxThe approach at University of Liverpool.pptx
The approach at University of Liverpool.pptx
 
Supporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptxSupporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptx
 
Fish and Chips - have they had their chips
Fish and Chips - have they had their chipsFish and Chips - have they had their chips
Fish and Chips - have they had their chips
 
The geography of Taylor Swift - some ideas
The geography of Taylor Swift - some ideasThe geography of Taylor Swift - some ideas
The geography of Taylor Swift - some ideas
 
Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46
Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46
Mule 4.6 & Java 17 Upgrade | MuleSoft Mysore Meetup #46
 
The French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free downloadThe French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free download
 
Palestine last event orientationfvgnh .pptx
Palestine last event orientationfvgnh .pptxPalestine last event orientationfvgnh .pptx
Palestine last event orientationfvgnh .pptx
 
Language Across the Curriculm LAC B.Ed.
Language Across the  Curriculm LAC B.Ed.Language Across the  Curriculm LAC B.Ed.
Language Across the Curriculm LAC B.Ed.
 

Fragmentation techniques

  • 1. FRAGMENTATION TECHNIQUES IN MASS SPECTROSCOPY Presented by: Sk.Samiya, 1st year M-Pharm,(Pharmacology) Hindu College of Pharmacy
  • 2. Mass spectroscopy Definition: It is a powerful analytical technique useful for determination of molecular weight of compound. Principle:  Initially in mass spectroscopy the sample must be converted into vapourised or gaseous form then it undergo ionization to form a molecular ion with the liberation of 1e-.  This molecular ion normally undergoes fragmentation to form several fragmented ions or daughter ions.
  • 3. FRAGMENTATION  The process of breaking up of molecular ion into smaller or daughter ions is known as “fragmentation”.  The molecular ion commonly decomposes to a pair of fragments, which may be either a radical with an ion or a small molecule & a radical cation.
  • 4. Fragmentation process  Bombardment of molecules by a electron beam with energy between 10-15ev usually results in the ionization of molecules by removal of one electron (molecular ion formation).  When the energy of electron beam is increased between 50-7ev, these molecular ions acquire a high excitation resulting in their break down into various fragments.
  • 5. General modes of fragmentation Fragmentation of the molecular ion takes place in following mods:  Simple cleavage 1. Homolytic cleavage 2. Heterolytic cleavage 3. Semi heterolytic cleavage  Rearrangement reactions 1. Elimination reactions 2. Ortho reaction 3. Mc-lafferty rearrangement
  • 6. Simple cleavage: Transfer of electrons takes place 1. Homolytic cleavage  In hemolytic cleavage the electrons are equally transferred to both atoms & it forms radical and cation. R H2C CH CH2 R H2C CH CH2 R + CH HC CH2 IONISATION HOMOLYTIC CLEAVAGE
  • 7. 2. Heterolytic cleavage  Fragmentation by movement of two electrons:  In this type of cleavage both the electrons of the bond are taken over by one of the atoms; the fragments are an even electron cation and a radical with the positive charge residing on the alkyl group. C4H9I ionisation CH3 CH2 + I C4H9I HETEROLYTIC CLEAVAGE
  • 8. 3.Semi heterolytic cleavage  In this one electron bond cleavage takes place resulting in formation of radical & cation. C H H H H C H H H H CH3 + H IONISATION CLEAVAGE
  • 9. Rearrangement reaction  It involves the cleavage of bonds and formation of new bonds i.e., it requires changes to at least two bonds.  So the produced ions are not structural units of precursors.  Generally rearrangement leads to loss of smaller molecules.
  • 10. 1. Elimination reaction  In his fragmentation hydrogen is obstructed by hydroxyl group or halogen or acetate functional groups results in the elimination of water or neutral molecule. R – CH2 – CH2 –CH2 R – CH2 – CH2 – CH2 + OCOCH3 OCOCH3 CH3COOH + R – CH2 – CH = CH2
  • 11. 2. Ortho effect reaction  In the case of substituted aromatic compounds the substitute & carbon come into proximity has help in elimination of neutral molecule. This effect is called ortho effect. O O CH3 CH3 O O CH3 C H2 C O CH2 + OCH3 H C C C O CH2 + CH3OH methyl 2-methylbenzoate methyl 2-methylbenzoate ion (6-methylenecyclohexa-2,4- dienylidene)methanone H
  • 12. 3. Mc-Lafferty rearrangement reaction  The loss of an alkene fragment by cyclic rearrangement of a carbonyl compounds ( like aldehyde, ketones, acids, esters, amines), unsaturated compounds with γ-hydrogens undergo Mc-Lafferty rearrangement. Or  It involves the migration of γ-hydrogen atom followed by cleavage of β-bond then rearrangement leads to the elimination of neutral molecule.
  • 13. Mechanism Fragmentation takes place only at γ-hydrogen Then this hydrogen is obstructed by oxygen of carbonyl group or unsaturated compound. Carbonyl group is converted to hydroxyl group Bond break down between α & β carbons resulting in liberation of 2e-’s then rearrangement takes place to form a simple alkene.
  • 17. REFERENCES:  Instrumental methods of chemical analysis- B.K Sharma,  Instrumental methods of analysis By Chatwal,  Principles of Instrumental analysis By Donglas Skoog