Epigenetics is the study of changes in organisms caused by gene expression rather than changes in genetic code. Epigenetics refers to mechanisms such as DNA methylation and histone modification that control gene expression without altering the underlying DNA sequence. These epigenetic changes can be caused by environmental interactions and can affect phenotypes. Examples of diseases linked to epigenetics include cancer, mental retardation, and cardiovascular disease.
This presentation on Epigenetics is most advanced and evidence based one. Its Very helpful for Genetics students and research fellows, Reproductive Medicine specialist, Reproductive Biologist, Infertility practitioners
This presentation on Epigenetics is most advanced and evidence based one. Its Very helpful for Genetics students and research fellows, Reproductive Medicine specialist, Reproductive Biologist, Infertility practitioners
Epigenetics is the study of heritable changes in gene expression (active versus inactive genes) that do not involve changes to the underlying DNA sequence — a change in phenotype without a change in genotype — which in turn affects how cells read the genes. - [https://www.whatisepigenetics.com/fundamentals/]
Author of this presentation: The University of Western Australia
"Epigenetics refers to genetic factors that change an organism’s appearance or biological functions without changing the actual DNA sequence. In other words, gene expression changes but the genes themselves don’t. Epigenetics adds an additional level of complexity to the genetic code." - Public Health Cafe
“Inheritance” in images, from Darwin’s “tree of life” to DNA’s iconic crystallography to the epigenetic dynamicsHowever, the script needs to be interpreted and receives meaning only from the interplay with the environment
Epigenetics definition, history of epigenetics, molecular basis of epigenetics, epigenetic modification, tools to study epigenetics, disease linked with epigenetics, DNA methylation demethylation and enzymes regulating DNA methylation
Epigenetics is the study of heritable changes in gene expression (active versus inactive genes) that do not involve changes to the underlying DNA sequence — a change in phenotype without a change in genotype — which in turn affects how cells read the genes. - [https://www.whatisepigenetics.com/fundamentals/]
Author of this presentation: The University of Western Australia
"Epigenetics refers to genetic factors that change an organism’s appearance or biological functions without changing the actual DNA sequence. In other words, gene expression changes but the genes themselves don’t. Epigenetics adds an additional level of complexity to the genetic code." - Public Health Cafe
“Inheritance” in images, from Darwin’s “tree of life” to DNA’s iconic crystallography to the epigenetic dynamicsHowever, the script needs to be interpreted and receives meaning only from the interplay with the environment
Epigenetics definition, history of epigenetics, molecular basis of epigenetics, epigenetic modification, tools to study epigenetics, disease linked with epigenetics, DNA methylation demethylation and enzymes regulating DNA methylation
-Basic Concepts in Genetics
-What is Epigenetic?
-History of Epigenetic
-How do epigenetics work?
-Epigenetics and the Environment
-Epigenetic Inheritance
-Epigenetics in Psychiatry
Epigenetics is the study, in the field of genetics, of cellular and physiological phenotypic trait variations that are caused by external or environmental factors that switch genes on and off and affect how cells read genes instead of being caused by changes in the DNA sequence. -Wikipedia
Epigenetics and it's relevance in crop improvementShamlyGupta
Epigenetics means ‘above’ or ‘on top of genetics’
A study of the changes in gene expression that are mitotically and/or meiotically heritable and do not involve a change in the DNA sequence
Gene-regulatory information that is not expressed in DNA sequences but transmitted from one generation (of cells or organisms) to the next
Coined by embryologist C. H. Waddington in 1942.
Prof. Dr. Vladimir Trajkovski - Epigenetics of ASD-10.05.2019Vladimir Trajkovski
President of MSSA Prof. Dr. Vladimir Trajkovski presented this topic "Epigenetics of Autism Spectrum Disorders" at the mini simposyum in Voerandaal, Holland, organized by ReAttach Academy at May 10th 2019.
Immerse yourself in a captivating world epigenetics with our comprehensive PDF guide, this document serves as an insightful resource for both beginners and seasoned enthusiasts seeking a deeper understanding of the molecular mechanisms that influence gene expression and cellular function.
Unlock the secrets behind the heritable changes in gene activity that go beyond the DNA sequence, as we explore the dynamic interplay between genetics and environmental factors. This PDF delves into the fascinating realm of epigenetic modifications, including DNA methylation, histone modification, and non-coding RNA, shedding light on their pivotal roles in regulating gene expression and cellular identity.
Download "what is Epigenetics" document now and embark on a journey that transcends the traditional boundaries of genetics, exploring the intricate tapestry of epigenetic regulation that influences life at its very core.
Epigenetics studies stably heritable traits that cannot be explained by changes in DNA sequence.
Covalent modifications in chromatin
DNA- DNA methylation (CpG); hydroxymethylation
Histone - lysine acetylation, lysine and arginine methylation, serine and threonine phosphorylation, and lysine ubiquitination and sumoylation
Epigenetic mechanisms:
Modified histones as post translational modification
DNA methylation – 5mC the 5th base, methyl transferases; genetic imprinting.
Epigenomics: complete set of epigenetic modifications on the genetic material of a cell.
Specific epigenetic regulation
RNA interference
X inactivation (Lyonization)
Genomic imprinting
Epigenetics in development and diseases.
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
The increased availability of biomedical data, particularly in the public domain, offers the opportunity to better understand human health and to develop effective therapeutics for a wide range of unmet medical needs. However, data scientists remain stymied by the fact that data remain hard to find and to productively reuse because data and their metadata i) are wholly inaccessible, ii) are in non-standard or incompatible representations, iii) do not conform to community standards, and iv) have unclear or highly restricted terms and conditions that preclude legitimate reuse. These limitations require a rethink on data can be made machine and AI-ready - the key motivation behind the FAIR Guiding Principles. Concurrently, while recent efforts have explored the use of deep learning to fuse disparate data into predictive models for a wide range of biomedical applications, these models often fail even when the correct answer is already known, and fail to explain individual predictions in terms that data scientists can appreciate. These limitations suggest that new methods to produce practical artificial intelligence are still needed.
In this talk, I will discuss our work in (1) building an integrative knowledge infrastructure to prepare FAIR and "AI-ready" data and services along with (2) neurosymbolic AI methods to improve the quality of predictions and to generate plausible explanations. Attention is given to standards, platforms, and methods to wrangle knowledge into simple, but effective semantic and latent representations, and to make these available into standards-compliant and discoverable interfaces that can be used in model building, validation, and explanation. Our work, and those of others in the field, creates a baseline for building trustworthy and easy to deploy AI models in biomedicine.
Bio
Dr. Michel Dumontier is the Distinguished Professor of Data Science at Maastricht University, founder and executive director of the Institute of Data Science, and co-founder of the FAIR (Findable, Accessible, Interoperable and Reusable) data principles. His research explores socio-technological approaches for responsible discovery science, which includes collaborative multi-modal knowledge graphs, privacy-preserving distributed data mining, and AI methods for drug discovery and personalized medicine. His work is supported through the Dutch National Research Agenda, the Netherlands Organisation for Scientific Research, Horizon Europe, the European Open Science Cloud, the US National Institutes of Health, and a Marie-Curie Innovative Training Network. He is the editor-in-chief for the journal Data Science and is internationally recognized for his contributions in bioinformatics, biomedical informatics, and semantic technologies including ontologies and linked data.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
3. Epigenetics:
• The study of changes in organism caused by
modification of gene expression rather than
alteration of genetic code
• In other words : a change in phenotype
without a change in genotype
4. • Concept of epigenetics work:
– It's not just genes that make us.
In its modern sense, epigenetics is the term
used to describe inheritance by mechanisms other
than through the DNA sequence of genes. It can
apply to characteristics passed from a cell to its
daughter cells in cell division.
5. Epigenetics at molecular level :
• Epigenetics refers to the addition or
deletion of a methyl group to a DNA base,
turning the gene ON or OFF ,or to
packaging of the chromatin structure by
silencing or opening regions of the
genome by winding or unwinding the DNA
around histones
6. Changes in epigenetics :
• Interactions we have with our environment
can cause epigenetic changes that affect how
our genes work. These interactions include
behaviors like smoking, eating, drinking,
exercise, and exposure to natural and
manufactured chemicals in air, water, and
food.
7.
8. Example
• Body A
• Colour : brown
• Shape : straight
• Length: 10cm
• Growth : 0.5mm/day
• Body B
• Colour : black
• Shape : curly
• Length : 15cm
• Growth: 1mm/day
11. DNA METHYLATION
It is the introduction of methyl(CH3) group to the DNA
molecule covalently.
eukaryotic DNA methylation occur through an enzyme
called DNA METHYLTRANSFERASE
It actually inhibit the process of gene transcription
DNA methylation also play important role in silencing of
tissue specific gene
12. Mostly methyl group are attach to the cytosine at position no 5
These CpG islands are commonly 1000 to 2000 bp in length
and contain a high number of CpG sites
In case of house keeping gene-gene that encode proteins
required in most cells of multicellular organism-the cytosine
base pair is unmethylated
13. Methylation can affect transcription in two general ways
1. Actually the methylation at the promoter region prevent the
attachment of transcription-factor
2. We inhibit transcription via protein known as methyl-CpG-
binding-protein, which bind methylated sequences
14.
15. Histones are protein molecule which are present in the nucleus
around which DNA are wrapped
it is present in different form i.e H2A,H2B,H3,H4
Histone modification is actually the chemical modification of histone
protein
These are acetylation and methylation
16. In case of acetylation there are two
way of regulation of gene
-Acetylation
-Deacetylation
In case of acetylation of histone protein the DNA is
unwrapped from the histone protein
-Histone acetyl transferase
In case of deacetylation the DNA wrapped around the histone
protein
-Histone deacetyltransferase
17. In case of methylation either the DNA wrapped around the histone
protein or it either unwrapped the DNA from the histone protein
18. RNA INTERFERENCE
This is also a regulatory mechanism of the expression of gene
In this process the double stranded RNA are produce by the cell and that
double stranded RNA is responsible for the suppression pf gene expression
DICER is an enzyme which divided the Ds RNA into fragment (miRNA,SiRNA)
The siRNA is responsible for silencing of gene expression
19.
20. Epigenetics and Diseases
• While epigenetics changes are required for
normal development and health they can also
be responsible for many disease states .
Disrupting any of the system that contribute
to epigenetics alteration can cause abnormal
activation or silencing of genes
21. Epigenetics and Cancer
• First human disease to be linked to
epigenetics was cancer 1983
• An epigenetic change silence a tumor
suppressor gene
• Due to high methylation of CPG sites
22.
23. Epigenetics and Mental Retardation
• Fragile X syndrome is the most frequently
inherited mental disability
• People with this syndrome have severe
intellectual disabilities , delay verbal
development and autistic like behaviour
• The syndrome is caused by an abnormility in
the FMR1
• Caused by methylation of CPG island on the
promoter region of FMR1 gene
24. Cardiovascular diseases and
epigenetics
• Atherosclerosis is a major factor in
cardiovascular diseases and the function of
smooth muscle cell and endothelial cells are
central to the development of atherosclerosis
• Evidence has indicated that epigenetics
process such as methylation and histone
acetylation has critical function in modulating
smooth muscle cells and endothelial cells
homeostasis